RNA–Protein interactions for RNA: ENST00000235958.4

HMGCL-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 5

Gene HMGCL, Length 1,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-201ENST00000235958 CCDC88AQ3V6T2 1871 aa12.53□□□□□ -0.4
HMGCL-201ENST00000235958 LRRC37AA6NMS7 1700 aa12.52□□□□□ -0.41
HMGCL-201ENST00000235958 IFIT1P09914 478 aaKnown RBP12.52□□□□□ -0.41
HMGCL-201ENST00000235958 SLC5A1P13866 664 aa12.52□□□□□ -0.41
HMGCL-201ENST00000235958 KLRK1P26718 216 aa12.52□□□□□ -0.41
HMGCL-201ENST00000235958 PRELPP51888 382 aa12.52□□□□□ -0.41
HMGCL-201ENST00000235958 RASSF7Q02833 373 aa12.52□□□□□ -0.41
HMGCL-201ENST00000235958 TNNI3KQ59H18 835 aa12.52□□□□□ -0.41
HMGCL-201ENST00000235958 C15orf52Q6ZUT6 534 aaKnown RBP12.52□□□□□ -0.41
HMGCL-201ENST00000235958 C16orf71Q8IYS4 520 aaPredicted RBP12.52□□□□□ -0.41
HMGCL-201ENST00000235958 XAGE2Q96GT9 111 aa12.52□□□□□ -0.41
HMGCL-201ENST00000235958 FAM84BQ96KN1 310 aaPredicted RBP12.52□□□□□ -0.41
HMGCL-201ENST00000235958 CCDC8Q9H0W5 538 aaPredicted RBP12.52□□□□□ -0.41
HMGCL-201ENST00000235958 ZBTB47Q9UFB7 747 aaPredicted RBP12.52□□□□□ -0.41
HMGCL-201ENST00000235958 FPGT-TNNI3KV9GXZ4 949 aa12.52□□□□□ -0.41
HMGCL-201ENST00000235958 LTBP3Q9NS15 1303 aa12.52□□□□□ -0.41
HMGCL-201ENST00000235958 PPIP5K2O43314 1243 aa12.51□□□□□ -0.41
HMGCL-201ENST00000235958 ADORA1P30542 326 aa12.51□□□□□ -0.41
HMGCL-201ENST00000235958 IARSP41252 1262 aaKnown RBP12.51□□□□□ -0.41
HMGCL-201ENST00000235958 GYG1P46976 350 aa12.51□□□□□ -0.41
HMGCL-201ENST00000235958 BCAMP50895 628 aa12.51□□□□□ -0.41
HMGCL-201ENST00000235958 NUCB1Q02818 461 aa12.51□□□□□ -0.41
HMGCL-201ENST00000235958 KIAA2012Q0VF49 1180 aa12.51□□□□□ -0.41
HMGCL-201ENST00000235958 AOC3Q16853 763 aa12.51□□□□□ -0.41
HMGCL-201ENST00000235958 DOK7Q18PE1 504 aa12.51□□□□□ -0.41
HMGCL-201ENST00000235958 FBXO33Q7Z6M2 555 aa12.51□□□□□ -0.41
HMGCL-201ENST00000235958 AACSQ86V21 672 aa12.51□□□□□ -0.41
HMGCL-201ENST00000235958 GTF3C3Q9Y5Q9 886 aa12.51□□□□□ -0.41
HMGCL-201ENST00000235958 G3V3G9 751 aa12.5□□□□□ -0.41
HMGCL-201ENST00000235958 IFIT2P09913 472 aaKnown RBP12.5□□□□□ -0.41
HMGCL-201ENST00000235958 LMNB1P20700 586 aa12.5□□□□□ -0.41
HMGCL-201ENST00000235958 HIBADHP31937 336 aaKnown RBP12.5□□□□□ -0.41
HMGCL-201ENST00000235958 CAVIN4Q5BKX8 364 aa12.5□□□□□ -0.41
HMGCL-201ENST00000235958 GORABQ5T7V8 394 aa12.5□□□□□ -0.41
HMGCL-201ENST00000235958 DCAF8Q5TAQ9 597 aa12.5□□□□□ -0.41
HMGCL-201ENST00000235958 CENPQQ7L2Z9 268 aaPredicted RBP12.5□□□□□ -0.41
HMGCL-201ENST00000235958 LARGE2Q8N3Y3 721 aa12.5□□□□□ -0.41
HMGCL-201ENST00000235958 DBNDD2Q9BQY9 259 aa12.5□□□□□ -0.41
HMGCL-201ENST00000235958 LNPKQ9C0E8 428 aa12.5□□□□□ -0.41
HMGCL-201ENST00000235958 KDM2BQ8NHM5 1336 aa12.5□□□□□ -0.41
HMGCL-201ENST00000235958 IRS2Q9Y4H2 1338 aa12.5□□□□□ -0.41
HMGCL-201ENST00000235958 SBF1O95248 1867 aa12.5□□□□□ -0.41
HMGCL-201ENST00000235958 CHD4Q14839 1912 aa12.5□□□□□ -0.41
HMGCL-201ENST00000235958 A0A1B0GUL6 1792 aa12.49□□□□□ -0.41
HMGCL-201ENST00000235958 LTBP1Q14766 1721 aa12.49□□□□□ -0.41
HMGCL-201ENST00000235958 CHD1LQ86WJ1 897 aa12.49□□□□□ -0.41
HMGCL-201ENST00000235958 VPS37DQ86XT2 251 aa12.49□□□□□ -0.41
HMGCL-201ENST00000235958 DBNLQ9UJU6 430 aaKnown RBP12.49□□□□□ -0.41
HMGCL-201ENST00000235958 MED23Q9ULK4 1368 aa12.48□□□□□ -0.41
HMGCL-201ENST00000235958 PHKA1P46020 1223 aa12.48□□□□□ -0.41
HMGCL-201ENST00000235958 C9orf131Q5VYM1 1079 aa12.48□□□□□ -0.41
HMGCL-201ENST00000235958 CCDC102BQ68D86 513 aa12.48□□□□□ -0.41
HMGCL-201ENST00000235958 ZNF804AQ7Z570 1209 aa12.48□□□□□ -0.41
HMGCL-201ENST00000235958 JDP2Q8WYK2 163 aa12.48□□□□□ -0.41
HMGCL-201ENST00000235958 COA1Q9GZY4 146 aa12.48□□□□□ -0.41
HMGCL-201ENST00000235958 DBNDD1Q9H9R9 158 aa12.48□□□□□ -0.41
HMGCL-201ENST00000235958 CD209Q9NNX6 404 aa12.48□□□□□ -0.41
HMGCL-201ENST00000235958 KCNQ5Q9NR82 932 aa12.48□□□□□ -0.41
HMGCL-201ENST00000235958 TLR7Q9NYK1 1049 aaKnown RBP12.48□□□□□ -0.41
HMGCL-201ENST00000235958 DUOX1Q9NRD9 1551 aa12.47□□□□□ -0.41
HMGCL-201ENST00000235958 CCDC158Q5M9N0 1113 aa12.47□□□□□ -0.41
HMGCL-201ENST00000235958 PODNQ7Z5L7 613 aa12.47□□□□□ -0.41
HMGCL-201ENST00000235958 NIM1KQ8IY84 436 aa12.47□□□□□ -0.41
HMGCL-201ENST00000235958 TDRD7Q8NHU6 1098 aaKnown RBP12.47□□□□□ -0.41
HMGCL-201ENST00000235958 OTUD7AQ8TE49 926 aaPredicted RBP12.47□□□□□ -0.41
HMGCL-201ENST00000235958 ZNRF3Q9ULT6 936 aa12.47□□□□□ -0.41
HMGCL-201ENST00000235958 IQSEC3Q9UPP2 1182 aaPredicted RBP12.47□□□□□ -0.41
HMGCL-201ENST00000235958 YDJCA8MPS7 323 aa12.46□□□□□ -0.41
HMGCL-201ENST00000235958 ECE2O60344 883 aa12.46□□□□□ -0.41
HMGCL-201ENST00000235958 IL1R1P14778 569 aa12.46□□□□□ -0.41
HMGCL-201ENST00000235958 GNL3LQ9NVN8 582 aaKnown RBP12.46□□□□□ -0.41
HMGCL-201ENST00000235958 RNF181Q9P0P0 153 aa12.46□□□□□ -0.41
HMGCL-201ENST00000235958 ZNF609O15014 1411 aa12.45□□□□□ -0.42
HMGCL-201ENST00000235958 FZD9O00144 591 aa12.45□□□□□ -0.42
HMGCL-201ENST00000235958 FRAT2O75474 233 aaPredicted RBP12.45□□□□□ -0.42
HMGCL-201ENST00000235958 TTC39AQ5SRH9 613 aa12.45□□□□□ -0.42
HMGCL-201ENST00000235958 TTLL5Q6EMB2 1281 aa12.45□□□□□ -0.42
HMGCL-201ENST00000235958 ECHDC1Q9NTX5 307 aa12.45□□□□□ -0.42
HMGCL-201ENST00000235958 UTRNP46939 3433 aa12.45□□□□□ -0.42
HMGCL-201ENST00000235958 DICER1Q9UPY3 1922 aaKnown RBP12.45□□□□□ -0.42
HMGCL-201ENST00000235958 RAD17O75943 681 aa12.44□□□□□ -0.42
HMGCL-201ENST00000235958 UQCRFS1P1P0C7P4 283 aa12.44□□□□□ -0.42
HMGCL-201ENST00000235958 ATP5JP18859 108 aa12.44□□□□□ -0.42
HMGCL-201ENST00000235958 PDE4AP27815 886 aa12.44□□□□□ -0.42
HMGCL-201ENST00000235958 GTF2IP78347 998 aa12.44□□□□□ -0.42
HMGCL-201ENST00000235958 CXCL9Q07325 125 aa12.44□□□□□ -0.42
HMGCL-201ENST00000235958 SCARF1Q14162 830 aa12.44□□□□□ -0.42
HMGCL-201ENST00000235958 PLEKHM2Q8IWE5 1019 aa12.44□□□□□ -0.42
HMGCL-201ENST00000235958 ZNF512BQ96KM6 892 aaPredicted RBP12.44□□□□□ -0.42
HMGCL-201ENST00000235958 STAP2Q9UGK3 403 aa12.44□□□□□ -0.42
HMGCL-201ENST00000235958 SALL3Q9BXA9 1300 aa12.43□□□□□ -0.42
HMGCL-201ENST00000235958 COL4A5P29400 1685 aa12.43□□□□□ -0.42
HMGCL-201ENST00000235958 USP17L3A6NCW0 530 aa12.43□□□□□ -0.42
HMGCL-201ENST00000235958 USP17L4A6NCW7 530 aa12.43□□□□□ -0.42
HMGCL-201ENST00000235958 MX1P20591 662 aa12.43□□□□□ -0.42
HMGCL-201ENST00000235958 ARID4AP29374 1257 aaPredicted RBP12.43□□□□□ -0.42
HMGCL-201ENST00000235958 MCAMP43121 646 aa12.43□□□□□ -0.42
HMGCL-201ENST00000235958 PDE1AP54750 535 aa12.43□□□□□ -0.42
HMGCL-201ENST00000235958 EIF6P56537 245 aaKnown RBP12.43□□□□□ -0.42
HMGCL-201ENST00000235958 USP17L1Q7RTZ2 530 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms