RNA–Protein interactions for RNA: ENST00000233072.9

CPS1-201, Transcript of carbamoyl-phosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPS1, Length 5,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-201ENST00000233072 UBASH3AP57075 661 aa8.2□□□□□ -1.1
CPS1-201ENST00000233072 TUBB2AQ13885 445 aa8.2□□□□□ -1.1
CPS1-201ENST00000233072 TRIM14Q14142 442 aa8.2□□□□□ -1.1
CPS1-201ENST00000233072 KIAA1524Q8TCG1 905 aa8.2□□□□□ -1.1
CPS1-201ENST00000233072 TUBB2BQ9BVA1 445 aa8.2□□□□□ -1.1
CPS1-201ENST00000233072 BCCIPQ9P287 314 aaKnown RBP eCLIP8.2□□□□□ -1.1
CPS1-201ENST00000233072 YTHDC2Q9H6S0 1430 aaKnown RBP8.2□□□□□ -1.1
CPS1-201ENST00000233072 SPDYE4A6NLX3 237 aa8.2□□□□□ -1.1
CPS1-201ENST00000233072 GNA11P29992 359 aa8.2□□□□□ -1.1
CPS1-201ENST00000233072 NLRP3Q96P20 1036 aa8.2□□□□□ -1.1
CPS1-201ENST00000233072 SYNCQ9H7C4 482 aa8.2□□□□□ -1.1
CPS1-201ENST00000233072 JADE2Q9NQC1 790 aa8.2□□□□□ -1.1
CPS1-201ENST00000233072 CHPF2Q9P2E5 772 aa8.2□□□□□ -1.1
CPS1-201ENST00000233072 COMMD10Q9Y6G5 202 aa8.2□□□□□ -1.1
CPS1-201ENST00000233072 PDE1AP54750 535 aa8.19□□□□□ -1.1
CPS1-201ENST00000233072 NAPAP54920 295 aa8.19□□□□□ -1.1
CPS1-201ENST00000233072 CCDC129Q6ZRS4 1044 aa8.19□□□□□ -1.1
CPS1-201ENST00000233072 RBM8AQ9Y5S9 174 aaKnown RBP8.19□□□□□ -1.1
CPS1-201ENST00000233072 MAST3O60307 1309 aa8.19□□□□□ -1.1
CPS1-201ENST00000233072 ATP10BO94823 1461 aa8.19□□□□□ -1.1
CPS1-201ENST00000233072 HS1BP3Q53T59 392 aa8.19□□□□□ -1.1
CPS1-201ENST00000233072 SPECC1Q5M775 1068 aa8.19□□□□□ -1.1
CPS1-201ENST00000233072 NUP153P49790 1475 aaKnown RBP8.19□□□□□ -1.1
CPS1-201ENST00000233072 ATP6V1AP38606 617 aa8.19□□□□□ -1.1
CPS1-201ENST00000233072 CLUL1Q15846 466 aa8.19□□□□□ -1.1
CPS1-201ENST00000233072 RNF187Q5TA31 235 aaPredicted RBP8.19□□□□□ -1.1
CPS1-201ENST00000233072 CPLX3Q8WVH0 158 aa8.19□□□□□ -1.1
CPS1-201ENST00000233072 JAKMIP2Q96AA8 810 aa8.19□□□□□ -1.1
CPS1-201ENST00000233072 INTS4Q96HW7 963 aaKnown RBP8.19□□□□□ -1.1
CPS1-201ENST00000233072 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.19□□□□□ -1.1
CPS1-201ENST00000233072 V9GYY5 206 aaPredicted RBP8.19□□□□□ -1.1
CPS1-201ENST00000233072 KIF24Q5T7B8 1368 aa8.19□□□□□ -1.1
CPS1-201ENST00000233072 FOXO3O43524 673 aa8.19□□□□□ -1.1
CPS1-201ENST00000233072 ADAMTS2O95450 1211 aa8.19□□□□□ -1.1
CPS1-201ENST00000233072 IL2RBP14784 551 aa8.19□□□□□ -1.1
CPS1-201ENST00000233072 C20orf194Q5TEA3 1177 aa8.19□□□□□ -1.1
CPS1-201ENST00000233072 HEATR3Q7Z4Q2 680 aa8.19□□□□□ -1.1
CPS1-201ENST00000233072 TRAPPC8Q9Y2L5 1435 aa8.18□□□□□ -1.1
CPS1-201ENST00000233072 ERICH4A6NGS2 130 aa8.18□□□□□ -1.1
CPS1-201ENST00000233072 TRIM75PA6NK02 468 aa8.18□□□□□ -1.1
CPS1-201ENST00000233072 AKR1B10O60218 316 aa8.18□□□□□ -1.1
CPS1-201ENST00000233072 SDSP20132 328 aa8.18□□□□□ -1.1
CPS1-201ENST00000233072 TNNI2P48788 182 aa8.18□□□□□ -1.1
CPS1-201ENST00000233072 FBXO31Q5XUX0 539 aaPredicted RBP8.18□□□□□ -1.1
CPS1-201ENST00000233072 Q6ZUG5 572 aa8.18□□□□□ -1.1
CPS1-201ENST00000233072 ZNF622Q969S3 477 aaKnown RBP eCLIP8.18□□□□□ -1.1
CPS1-201ENST00000233072 MAPKBP1O60336 1514 aa8.18□□□□□ -1.1
CPS1-201ENST00000233072 ATP2A2P16615 1042 aaKnown RBP8.18□□□□□ -1.1
CPS1-201ENST00000233072 KRT79Q5XKE5 535 aa8.18□□□□□ -1.1
CPS1-201ENST00000233072 PPP1R14CQ8TAE6 165 aa8.18□□□□□ -1.1
CPS1-201ENST00000233072 SPAG5Q96R06 1193 aa8.18□□□□□ -1.1
CPS1-201ENST00000233072 DENND2AQ9ULE3 1009 aa8.18□□□□□ -1.1
CPS1-201ENST00000233072 UNC13AQ9UPW8 1703 aa8.18□□□□□ -1.1
CPS1-201ENST00000233072 FAM13AO94988 1023 aa8.18□□□□□ -1.1
CPS1-201ENST00000233072 UBE4AQ14139 1066 aa8.18□□□□□ -1.1
CPS1-201ENST00000233072 CCDC14Q49A88 953 aa8.18□□□□□ -1.1
CPS1-201ENST00000233072 VWA3BQ502W6 1294 aa8.18□□□□□ -1.1
CPS1-201ENST00000233072 XAGE3Q8WTP9 111 aa8.18□□□□□ -1.1
CPS1-201ENST00000233072 IQCGQ9H095 443 aaKnown RBP8.18□□□□□ -1.1
CPS1-201ENST00000233072 PBRM1Q86U86 1689 aa8.18□□□□□ -1.1
CPS1-201ENST00000233072 A0A1W2PRG0 241 aa8.18□□□□□ -1.1
CPS1-201ENST00000233072 CTAGE9A4FU28 777 aa8.18□□□□□ -1.1
CPS1-201ENST00000233072 SPDYE3A6NKU9 549 aa8.18□□□□□ -1.1
CPS1-201ENST00000233072 TOM1O60784 492 aa8.18□□□□□ -1.1
CPS1-201ENST00000233072 PHACTR2O75167 634 aa8.18□□□□□ -1.1
CPS1-201ENST00000233072 HOXB7P09629 217 aa8.18□□□□□ -1.1
CPS1-201ENST00000233072 LIG1P18858 919 aa8.18□□□□□ -1.1
CPS1-201ENST00000233072 WDR78Q5VTH9 848 aa8.18□□□□□ -1.1
CPS1-201ENST00000233072 LINS1Q8NG48 757 aa8.18□□□□□ -1.1
CPS1-201ENST00000233072 GOLGA1Q92805 767 aa8.18□□□□□ -1.1
CPS1-201ENST00000233072 DCAF5Q96JK2 942 aa8.18□□□□□ -1.1
CPS1-201ENST00000233072 PUF60Q9UHX1 559 aaKnown RBP8.18□□□□□ -1.1
CPS1-201ENST00000233072 COL17A1Q9UMD9 1497 aaPredicted RBP8.18□□□□□ -1.1
CPS1-201ENST00000233072 NPC1L1Q9UHC9 1359 aa8.18□□□□□ -1.1
CPS1-201ENST00000233072 MACROD2A1Z1Q3 448 aa8.18□□□□□ -1.1
CPS1-201ENST00000233072 KRT86O43790 486 aa8.18□□□□□ -1.1
CPS1-201ENST00000233072 GNG11P61952 73 aa8.18□□□□□ -1.1
CPS1-201ENST00000233072 PRPF4BQ13523 1007 aaKnown RBP8.18□□□□□ -1.1
CPS1-201ENST00000233072 BRF1Q92994 677 aa8.18□□□□□ -1.1
CPS1-201ENST00000233072 ZMYM4Q5VZL5 1548 aa8.17□□□□□ -1.1
CPS1-201ENST00000233072 ASIC1P78348 528 aa8.17□□□□□ -1.1
CPS1-201ENST00000233072 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.17□□□□□ -1.1
CPS1-201ENST00000233072 OGFOD1Q8N543 542 aa8.17□□□□□ -1.1
CPS1-201ENST00000233072 HOOK2Q96ED9 719 aa8.17□□□□□ -1.1
CPS1-201ENST00000233072 C16orf45Q96MC5 204 aaPredicted RBP8.17□□□□□ -1.1
CPS1-201ENST00000233072 EDC4Q6P2E9 1401 aaKnown RBP8.17□□□□□ -1.1
CPS1-201ENST00000233072 CCDC144CPQ8IYA2 1237 aa8.17□□□□□ -1.1
CPS1-201ENST00000233072 PARP3Q9Y6F1 533 aa8.17□□□□□ -1.1
CPS1-201ENST00000233072 ABCC2Q92887 1545 aa8.17□□□□□ -1.1
CPS1-201ENST00000233072 ATP5J2-PTCD1G3V325 749 aa8.17□□□□□ -1.1
CPS1-201ENST00000233072 DKC1O60832 514 aaKnown RBP eCLIP8.17□□□□□ -1.1
CPS1-201ENST00000233072 RPL13P26373 211 aaKnown RBP8.17□□□□□ -1.1
CPS1-201ENST00000233072 ATP5DP30049 168 aa8.17□□□□□ -1.1
CPS1-201ENST00000233072 NMIQ13287 307 aaPredicted RBP8.17□□□□□ -1.1
CPS1-201ENST00000233072 ANO6Q4KMQ2 910 aa8.17□□□□□ -1.1
CPS1-201ENST00000233072 ANKS4BQ8N8V4 417 aa8.17□□□□□ -1.1
CPS1-201ENST00000233072 NEK11Q8NG66 645 aa8.17□□□□□ -1.1
CPS1-201ENST00000233072 CFAP57Q96MR6 1250 aa8.17□□□□□ -1.1
CPS1-201ENST00000233072 VAT1LQ9HCJ6 419 aa8.17□□□□□ -1.1
CPS1-201ENST00000233072 CEP83Q9Y592 693 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms