RNA–Protein interactions for RNA: ENST00000230480.10

VEGFA-201, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-201ENST00000230480 EYA2O00167 538 aa17.21■□□□□ 0.35
VEGFA-201ENST00000230480 FAM84BQ96KN1 310 aaPredicted RBP17.21■□□□□ 0.35
VEGFA-201ENST00000230480 COPRSQ9NQ92 184 aa17.21■□□□□ 0.35
VEGFA-201ENST00000230480 CNNM1Q9NRU3 951 aa17.21■□□□□ 0.35
VEGFA-201ENST00000230480 ZNF609O15014 1411 aa17.21■□□□□ 0.34
VEGFA-201ENST00000230480 ITGBL1O95965 494 aaPredicted RBP17.2■□□□□ 0.34
VEGFA-201ENST00000230480 GNAI3P08754 354 aa17.2■□□□□ 0.34
VEGFA-201ENST00000230480 HSPA6P17066 643 aa17.2■□□□□ 0.34
VEGFA-201ENST00000230480 DACT2Q5SW24 774 aa17.2■□□□□ 0.34
VEGFA-201ENST00000230480 PODNQ7Z5L7 613 aa17.2■□□□□ 0.34
VEGFA-201ENST00000230480 YTHDC1Q96MU7 727 aaKnown RBP17.2■□□□□ 0.34
VEGFA-201ENST00000230480 C1orf115Q9H7X2 142 aa17.2■□□□□ 0.34
VEGFA-201ENST00000230480 CD209Q9NNX6 404 aa17.2■□□□□ 0.34
VEGFA-201ENST00000230480 PDE8BO95263 885 aa17.19■□□□□ 0.34
VEGFA-201ENST00000230480 POLA2Q14181 598 aa17.19■□□□□ 0.34
VEGFA-201ENST00000230480 TNIP1Q15025 636 aa17.19■□□□□ 0.34
VEGFA-201ENST00000230480 CERS5Q8N5B7 392 aa17.19■□□□□ 0.34
VEGFA-201ENST00000230480 TRPM4Q8TD43 1214 aa17.19■□□□□ 0.34
VEGFA-201ENST00000230480 DPF2Q92785 391 aa17.19■□□□□ 0.34
VEGFA-201ENST00000230480 COA1Q9GZY4 146 aa17.19■□□□□ 0.34
VEGFA-201ENST00000230480 IQCA1LA6NCM1 817 aa17.18■□□□□ 0.34
VEGFA-201ENST00000230480 GNAI2P04899 355 aa17.18■□□□□ 0.34
VEGFA-201ENST00000230480 IL1R1P14778 569 aa17.18■□□□□ 0.34
VEGFA-201ENST00000230480 UBE4AQ14139 1066 aa17.18■□□□□ 0.34
VEGFA-201ENST00000230480 TAF7LQ5H9L4 462 aa17.18■□□□□ 0.34
VEGFA-201ENST00000230480 FBXO33Q7Z6M2 555 aa17.18■□□□□ 0.34
VEGFA-201ENST00000230480 PGAP2Q9UHJ9 254 aa17.18■□□□□ 0.34
VEGFA-201ENST00000230480 CNOT7Q9UIV1 285 aaKnown RBP17.18■□□□□ 0.34
VEGFA-201ENST00000230480 MROH5Q6ZUA9 1318 aa17.18■□□□□ 0.34
VEGFA-201ENST00000230480 CEP350Q5VT06 3117 aa17.17■□□□□ 0.34
VEGFA-201ENST00000230480 CIAO1O76071 339 aa17.17■□□□□ 0.34
VEGFA-201ENST00000230480 CENPBP07199 599 aaPredicted RBP17.17■□□□□ 0.34
VEGFA-201ENST00000230480 GYG1P46976 350 aa17.17■□□□□ 0.34
VEGFA-201ENST00000230480 ATP8B2P98198 1209 aa17.17■□□□□ 0.34
VEGFA-201ENST00000230480 FMR1Q06787 632 aaKnown RBP eCLIP17.17■□□□□ 0.34
VEGFA-201ENST00000230480 RSBN1LQ6PCB5 846 aaPredicted RBP17.17■□□□□ 0.34
VEGFA-201ENST00000230480 TDRD7Q8NHU6 1098 aaKnown RBP17.17■□□□□ 0.34
VEGFA-201ENST00000230480 SIL1Q9H173 461 aa17.17■□□□□ 0.34
VEGFA-201ENST00000230480 PASKQ96RG2 1323 aa17.17■□□□□ 0.34
VEGFA-201ENST00000230480 ZNF280AP59817 542 aaPredicted RBP17.16■□□□□ 0.34
VEGFA-201ENST00000230480 FSTL1Q12841 308 aa17.16■□□□□ 0.34
VEGFA-201ENST00000230480 CHADLQ6NUI6 762 aa17.16■□□□□ 0.34
VEGFA-201ENST00000230480 SAMD7Q7Z3H4 446 aa17.16■□□□□ 0.34
VEGFA-201ENST00000230480 ITPRIPQ8IWB1 547 aa17.16■□□□□ 0.34
VEGFA-201ENST00000230480 SIRT2Q8IXJ6 389 aa17.16■□□□□ 0.34
VEGFA-201ENST00000230480 MICALL2Q8IY33 904 aa17.16■□□□□ 0.34
VEGFA-201ENST00000230480 SSH3Q8TE77 659 aa17.16■□□□□ 0.34
VEGFA-201ENST00000230480 COG6Q9Y2V7 657 aa17.16■□□□□ 0.34
VEGFA-201ENST00000230480 USP17L3A6NCW0 530 aa17.15■□□□□ 0.34
VEGFA-201ENST00000230480 USP17L4A6NCW7 530 aa17.15■□□□□ 0.34
VEGFA-201ENST00000230480 SRGAP3O43295 1099 aa17.15■□□□□ 0.34
VEGFA-201ENST00000230480 HTRA3P83110 453 aa17.15■□□□□ 0.34
VEGFA-201ENST00000230480 MVPQ14764 893 aaKnown RBP17.15■□□□□ 0.34
VEGFA-201ENST00000230480 GRIK5Q16478 980 aa17.15■□□□□ 0.34
VEGFA-201ENST00000230480 METTL24Q5JXM2 366 aa17.15■□□□□ 0.34
VEGFA-201ENST00000230480 STRIP1Q5VSL9 837 aa17.15■□□□□ 0.34
VEGFA-201ENST00000230480 MAP1SQ66K74 1059 aaPredicted RBP17.15■□□□□ 0.34
VEGFA-201ENST00000230480 DLK2Q6UY11 383 aa17.15■□□□□ 0.34
VEGFA-201ENST00000230480 USP17L1Q7RTZ2 530 aa17.15■□□□□ 0.34
VEGFA-201ENST00000230480 LDHDQ86WU2 507 aa17.15■□□□□ 0.34
VEGFA-201ENST00000230480 C16orf71Q8IYS4 520 aaPredicted RBP17.15■□□□□ 0.34
VEGFA-201ENST00000230480 SMC1BQ8NDV3 1235 aa17.15■□□□□ 0.34
VEGFA-201ENST00000230480 ZBTB40Q9NUA8 1239 aa17.15■□□□□ 0.34
VEGFA-201ENST00000230480 FBXO3Q9UK99 471 aa17.15■□□□□ 0.34
VEGFA-201ENST00000230480 ASTN2O75129 1339 aaPredicted RBP17.15■□□□□ 0.34
VEGFA-201ENST00000230480 SASH1O94885 1247 aa17.14■□□□□ 0.33
VEGFA-201ENST00000230480 GTF2IP78347 998 aa17.14■□□□□ 0.33
VEGFA-201ENST00000230480 EAPPQ56P03 285 aaPredicted RBP17.14■□□□□ 0.33
VEGFA-201ENST00000230480 FTSJ3Q8IY81 847 aaKnown RBP17.14■□□□□ 0.33
VEGFA-201ENST00000230480 ADARB2Q9NS39 739 aaKnown RBP17.14■□□□□ 0.33
VEGFA-201ENST00000230480 RPS12P25398 132 aaKnown RBP17.13■□□□□ 0.33
VEGFA-201ENST00000230480 BCAMP50895 628 aa17.13■□□□□ 0.33
VEGFA-201ENST00000230480 CEP85Q6P2H3 762 aa17.13■□□□□ 0.33
VEGFA-201ENST00000230480 USP50Q70EL3 339 aaPredicted RBP17.13■□□□□ 0.33
VEGFA-201ENST00000230480 DNAJC5GQ8N7S2 189 aa17.13■□□□□ 0.33
VEGFA-201ENST00000230480 AGBL3Q8NEM8 1001 aa17.13■□□□□ 0.33
VEGFA-201ENST00000230480 JAG2Q9Y219 1238 aa17.13■□□□□ 0.33
VEGFA-201ENST00000230480 AOX1Q06278 1338 aa17.13■□□□□ 0.33
VEGFA-201ENST00000230480 FAM205AQ6ZU69 1335 aa17.13■□□□□ 0.33
VEGFA-201ENST00000230480 ARAP2Q8WZ64 1704 aa17.13■□□□□ 0.33
VEGFA-201ENST00000230480 COL1A1P02452 1464 aaPredicted RBP17.12■□□□□ 0.33
VEGFA-201ENST00000230480 ADORA1P30542 326 aa17.12■□□□□ 0.33
VEGFA-201ENST00000230480 KCNJ4P48050 445 aa17.12■□□□□ 0.33
VEGFA-201ENST00000230480 PDE3AQ14432 1141 aa17.12■□□□□ 0.33
VEGFA-201ENST00000230480 TBC1D10BQ4KMP7 808 aaPredicted RBP17.12■□□□□ 0.33
VEGFA-201ENST00000230480 TTLL5Q6EMB2 1281 aa17.12■□□□□ 0.33
VEGFA-201ENST00000230480 PNMA8AQ86V59 439 aaPredicted RBP17.12■□□□□ 0.33
VEGFA-201ENST00000230480 ZBED3Q96IU2 234 aaPredicted RBP17.12■□□□□ 0.33
VEGFA-201ENST00000230480 PCDHAC2Q9Y5I4 1007 aa17.12■□□□□ 0.33
VEGFA-201ENST00000230480 LMOD1P29536 600 aaPredicted RBP17.11■□□□□ 0.33
VEGFA-201ENST00000230480 HIBADHP31937 336 aaKnown RBP17.11■□□□□ 0.33
VEGFA-201ENST00000230480 IL15P40933 162 aaPredicted RBP17.11■□□□□ 0.33
VEGFA-201ENST00000230480 APLP1P51693 650 aa17.11■□□□□ 0.33
VEGFA-201ENST00000230480 TFCP2Q12800 502 aa17.11■□□□□ 0.33
VEGFA-201ENST00000230480 CNTROBQ8N137 903 aa17.11■□□□□ 0.33
VEGFA-201ENST00000230480 HDAC5Q9UQL6 1122 aa17.11■□□□□ 0.33
VEGFA-201ENST00000230480 NOP58Q9Y2X3 529 aaKnown RBP17.11■□□□□ 0.33
VEGFA-201ENST00000230480 TRAF5O00463 557 aa17.1■□□□□ 0.33
VEGFA-201ENST00000230480 TIMM10P62072 90 aa17.1■□□□□ 0.33
VEGFA-201ENST00000230480 PUM3Q15397 648 aaKnown RBP17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms