RNA–Protein interactions for RNA: ENST00000229328.9

PRKAB1-201, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKAB1, Length 2,610 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-201ENST00000229328 SNAP23O00161 211 aa17.19■□□□□ 0.34
PRKAB1-201ENST00000229328 LRP5O75197 1615 aa17.19■□□□□ 0.34
PRKAB1-201ENST00000229328 STX6O43752 255 aa17.19■□□□□ 0.34
PRKAB1-201ENST00000229328 USP21Q9UK80 565 aa17.19■□□□□ 0.34
PRKAB1-201ENST00000229328 NSFL1CQ9UNZ2 370 aaKnown RBP17.19■□□□□ 0.34
PRKAB1-201ENST00000229328 DDX60Q8IY21 1712 aaKnown RBP17.19■□□□□ 0.34
PRKAB1-201ENST00000229328 ZSCAN22P10073 491 aaPredicted RBP17.18■□□□□ 0.34
PRKAB1-201ENST00000229328 PHKA1P46020 1223 aa17.18■□□□□ 0.34
PRKAB1-201ENST00000229328 ANKRD1Q15327 319 aa17.18■□□□□ 0.34
PRKAB1-201ENST00000229328 WASHC4Q2M389 1173 aa17.18■□□□□ 0.34
PRKAB1-201ENST00000229328 CAVIN1Q6NZI2 390 aaKnown RBP17.18■□□□□ 0.34
PRKAB1-201ENST00000229328 ABCC12Q96J65 1359 aa17.18■□□□□ 0.34
PRKAB1-201ENST00000229328 AKAP11Q9UKA4 1901 aa17.18■□□□□ 0.34
PRKAB1-201ENST00000229328 FOXP2O15409 715 aa17.17■□□□□ 0.34
PRKAB1-201ENST00000229328 FGFR2P21802 821 aa17.17■□□□□ 0.34
PRKAB1-201ENST00000229328 CCDC102BQ68D86 513 aa17.17■□□□□ 0.34
PRKAB1-201ENST00000229328 TTLL5Q6EMB2 1281 aa17.17■□□□□ 0.34
PRKAB1-201ENST00000229328 LRRC2Q9BYS8 371 aa17.17■□□□□ 0.34
PRKAB1-201ENST00000229328 PUS7LQ9H0K6 701 aaKnown RBP17.17■□□□□ 0.34
PRKAB1-201ENST00000229328 GDPD2Q9HCC8 539 aa17.17■□□□□ 0.34
PRKAB1-201ENST00000229328 STK3Q13188 491 aa17.17■□□□□ 0.34
PRKAB1-201ENST00000229328 MROH5Q6ZUA9 1318 aa17.17■□□□□ 0.34
PRKAB1-201ENST00000229328 PUM3Q15397 648 aaKnown RBP17.17■□□□□ 0.34
PRKAB1-201ENST00000229328 Q6ZUG5 572 aa17.17■□□□□ 0.34
PRKAB1-201ENST00000229328 ZNF512BQ96KM6 892 aaPredicted RBP17.17■□□□□ 0.34
PRKAB1-201ENST00000229328 PANK2Q9BZ23 570 aa17.17■□□□□ 0.34
PRKAB1-201ENST00000229328 RBM27Q9P2N5 1060 aaKnown RBP17.17■□□□□ 0.34
PRKAB1-201ENST00000229328 ZFYP08048 801 aaPredicted RBP17.16■□□□□ 0.34
PRKAB1-201ENST00000229328 CCDC152Q4G0S7 254 aa17.16■□□□□ 0.34
PRKAB1-201ENST00000229328 LPIN2Q92539 896 aa17.16■□□□□ 0.34
PRKAB1-201ENST00000229328 MPHOSPH8Q99549 860 aa17.16■□□□□ 0.34
PRKAB1-201ENST00000229328 PIH1D3Q9NQM4 214 aaKnown RBP17.16■□□□□ 0.34
PRKAB1-201ENST00000229328 COL4A1P02462 1669 aa17.16■□□□□ 0.34
PRKAB1-201ENST00000229328 MTMR6Q9Y217 621 aa17.15■□□□□ 0.34
PRKAB1-201ENST00000229328 ZNF652Q9Y2D9 606 aa17.15■□□□□ 0.34
PRKAB1-201ENST00000229328 BCORQ6W2J9 1755 aa17.15■□□□□ 0.34
PRKAB1-201ENST00000229328 E7EWF7 191 aa17.15■□□□□ 0.34
PRKAB1-201ENST00000229328 LRRFIP1Q32MZ4 808 aaKnown RBP17.15■□□□□ 0.34
PRKAB1-201ENST00000229328 APPBP2Q92624 585 aa17.15■□□□□ 0.34
PRKAB1-201ENST00000229328 GRPEL1Q9HAV7 217 aa17.15■□□□□ 0.34
PRKAB1-201ENST00000229328 F13A1P00488 732 aa17.14■□□□□ 0.33
PRKAB1-201ENST00000229328 ARID4AP29374 1257 aaPredicted RBP17.14■□□□□ 0.33
PRKAB1-201ENST00000229328 C3orf67Q6ZVT6 689 aa17.14■□□□□ 0.33
PRKAB1-201ENST00000229328 ZNF831Q5JPB2 1677 aa17.14■□□□□ 0.33
PRKAB1-201ENST00000229328 LAMA4Q16363 1823 aa17.14■□□□□ 0.33
PRKAB1-201ENST00000229328 MRE11P49959 708 aa17.14■□□□□ 0.33
PRKAB1-201ENST00000229328 ERFEQ4G0M1 354 aa17.14■□□□□ 0.33
PRKAB1-201ENST00000229328 CLEC4GQ6UXB4 293 aa17.14■□□□□ 0.33
PRKAB1-201ENST00000229328 GADD45BO75293 160 aaPredicted RBP17.13■□□□□ 0.33
PRKAB1-201ENST00000229328 ZSCAN23Q3MJ62 389 aa17.13■□□□□ 0.33
PRKAB1-201ENST00000229328 BICDL1Q6ZP65 573 aa17.13■□□□□ 0.33
PRKAB1-201ENST00000229328 USP48Q86UV5 1035 aa17.13■□□□□ 0.33
PRKAB1-201ENST00000229328 BRF1Q92994 677 aa17.13■□□□□ 0.33
PRKAB1-201ENST00000229328 BCL2L12Q9HB09 334 aa17.13■□□□□ 0.33
PRKAB1-201ENST00000229328 SPATA31A6Q5VVP1 1343 aa17.13■□□□□ 0.33
PRKAB1-201ENST00000229328 CNTNAP4Q9C0A0 1308 aa17.13■□□□□ 0.33
PRKAB1-201ENST00000229328 ADD2P35612 726 aa17.13■□□□□ 0.33
PRKAB1-201ENST00000229328 SLC9C2Q5TAH2 1124 aa17.13■□□□□ 0.33
PRKAB1-201ENST00000229328 DHX32Q7L7V1 743 aaKnown RBP17.13■□□□□ 0.33
PRKAB1-201ENST00000229328 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.13■□□□□ 0.33
PRKAB1-201ENST00000229328 CNPY2Q9Y2B0 182 aa17.13■□□□□ 0.33
PRKAB1-201ENST00000229328 MYO5AQ9Y4I1 1855 aaKnown RBP17.13■□□□□ 0.33
PRKAB1-201ENST00000229328 THSD7AQ9UPZ6 1657 aa17.12■□□□□ 0.33
PRKAB1-201ENST00000229328 GPAA1O43292 621 aa17.12■□□□□ 0.33
PRKAB1-201ENST00000229328 TMEM63CQ9P1W3 806 aa17.12■□□□□ 0.33
PRKAB1-201ENST00000229328 TCHHQ07283 1943 aa17.12■□□□□ 0.33
PRKAB1-201ENST00000229328 RTL9Q8NET4 1388 aa17.12■□□□□ 0.33
PRKAB1-201ENST00000229328 LAMB2P55268 1798 aa17.12■□□□□ 0.33
PRKAB1-201ENST00000229328 VPS37CA5D8V6 355 aaPredicted RBP17.12■□□□□ 0.33
PRKAB1-201ENST00000229328 IDH1O75874 414 aaKnown RBP17.12■□□□□ 0.33
PRKAB1-201ENST00000229328 FGAP02671 866 aa17.12■□□□□ 0.33
PRKAB1-201ENST00000229328 SLC5A1P13866 664 aa17.12■□□□□ 0.33
PRKAB1-201ENST00000229328 HAND2P61296 217 aa17.12■□□□□ 0.33
PRKAB1-201ENST00000229328 EXOSC10Q01780 885 aaKnown RBP17.12■□□□□ 0.33
PRKAB1-201ENST00000229328 TBC1D9BQ66K14 1250 aa17.12■□□□□ 0.33
PRKAB1-201ENST00000229328 CHST3Q7LGC8 479 aa17.12■□□□□ 0.33
PRKAB1-201ENST00000229328 SRP68Q9UHB9 627 aaKnown RBP17.12■□□□□ 0.33
PRKAB1-201ENST00000229328 BTAF1O14981 1849 aa17.12■□□□□ 0.33
PRKAB1-201ENST00000229328 MYH7P12883 1935 aa17.11■□□□□ 0.33
PRKAB1-201ENST00000229328 IGHMBP2P38935 993 aaKnown RBP17.11■□□□□ 0.33
PRKAB1-201ENST00000229328 LARP1BQ659C4 914 aaKnown RBP17.11■□□□□ 0.33
PRKAB1-201ENST00000229328 AMIGO3Q86WK7 504 aa17.11■□□□□ 0.33
PRKAB1-201ENST00000229328 GTF3C6Q969F1 213 aa17.11■□□□□ 0.33
PRKAB1-201ENST00000229328 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.11■□□□□ 0.33
PRKAB1-201ENST00000229328 RTN4Q9NQC3 1192 aaKnown RBP17.11■□□□□ 0.33
PRKAB1-201ENST00000229328 WWC3Q9ULE0 1092 aa17.11■□□□□ 0.33
PRKAB1-201ENST00000229328 ISY1Q9ULR0 285 aaKnown RBP17.11■□□□□ 0.33
PRKAB1-201ENST00000229328 ARAP2Q8WZ64 1704 aa17.11■□□□□ 0.33
PRKAB1-201ENST00000229328 JAK2O60674 1132 aa17.11■□□□□ 0.33
PRKAB1-201ENST00000229328 HMGB1P09429 215 aaKnown RBP17.11■□□□□ 0.33
PRKAB1-201ENST00000229328 UQCRFS1P1P0C7P4 283 aa17.11■□□□□ 0.33
PRKAB1-201ENST00000229328 HSP90B1P14625 803 aaKnown RBP17.11■□□□□ 0.33
PRKAB1-201ENST00000229328 RASGRF1Q13972 1273 aa17.11■□□□□ 0.33
PRKAB1-201ENST00000229328 TTF1Q15361 905 aaPredicted RBP17.1■□□□□ 0.33
PRKAB1-201ENST00000229328 ZNF445P59923 1031 aa17.1■□□□□ 0.33
PRKAB1-201ENST00000229328 FGD1P98174 961 aa17.1■□□□□ 0.33
PRKAB1-201ENST00000229328 CHRNDQ07001 517 aa17.1■□□□□ 0.33
PRKAB1-201ENST00000229328 APOBRQ0VD83 1088 aa17.1■□□□□ 0.33
PRKAB1-201ENST00000229328 SPATA5Q8NB90 893 aa17.1■□□□□ 0.33
PRKAB1-201ENST00000229328 ZNF532Q9HCE3 1301 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 123 ms