RNA–Protein interactions for RNA: ENST00000228827.7

GPN3-201, Transcript of GPN-loop GTPase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPN3, Length 1,468 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-201ENST00000228827 CELF2O95319 508 aaKnown RBP17.95■□□□□ 0.46
GPN3-201ENST00000228827 HSPA1AP0DMV8 641 aaKnown RBP17.95■□□□□ 0.46
GPN3-201ENST00000228827 HSPA1BP0DMV9 641 aaKnown RBP17.95■□□□□ 0.46
GPN3-201ENST00000228827 KIF4BQ2VIQ3 1234 aa17.95■□□□□ 0.46
GPN3-201ENST00000228827 DEFB115Q30KQ5 88 aa17.95■□□□□ 0.46
GPN3-201ENST00000228827 DLK2Q6UY11 383 aa17.95■□□□□ 0.46
GPN3-201ENST00000228827 AGBL3Q8NEM8 1001 aa17.95■□□□□ 0.46
GPN3-201ENST00000228827 KAZALD1Q96I82 304 aa17.95■□□□□ 0.46
GPN3-201ENST00000228827 MXD3Q9BW11 206 aa17.95■□□□□ 0.46
GPN3-201ENST00000228827 COA1Q9GZY4 146 aa17.95■□□□□ 0.46
GPN3-201ENST00000228827 RASSF10A6NK89 507 aa17.95■□□□□ 0.46
GPN3-201ENST00000228827 PLIN1O60240 522 aa17.95■□□□□ 0.46
GPN3-201ENST00000228827 LDHAL6AQ6ZMR3 332 aa17.95■□□□□ 0.46
GPN3-201ENST00000228827 PAXIP1Q6ZW49 1069 aaPredicted RBP17.95■□□□□ 0.46
GPN3-201ENST00000228827 CDC37L1Q7L3B6 337 aa17.95■□□□□ 0.46
GPN3-201ENST00000228827 CNNM1Q9NRU3 951 aa17.95■□□□□ 0.46
GPN3-201ENST00000228827 BICC1Q9H694 974 aaKnown RBP17.94■□□□□ 0.46
GPN3-201ENST00000228827 UTYO14607 1347 aa17.93■□□□□ 0.46
GPN3-201ENST00000228827 ASTN2O75129 1339 aaPredicted RBP17.93■□□□□ 0.46
GPN3-201ENST00000228827 USP17L8P0C7I0 530 aa17.93■□□□□ 0.46
GPN3-201ENST00000228827 ZNF280AP59817 542 aaPredicted RBP17.93■□□□□ 0.46
GPN3-201ENST00000228827 GRM1Q13255 1194 aa17.93■□□□□ 0.46
GPN3-201ENST00000228827 DACT2Q5SW24 774 aa17.93■□□□□ 0.46
GPN3-201ENST00000228827 DCPSQ96C86 337 aaKnown RBP17.93■□□□□ 0.46
GPN3-201ENST00000228827 GMLQ99445 158 aa17.93■□□□□ 0.46
GPN3-201ENST00000228827 SCN9AQ15858 1988 aa17.92■□□□□ 0.46
GPN3-201ENST00000228827 ADM5C9JUS6 153 aa17.92■□□□□ 0.46
GPN3-201ENST00000228827 CT47B1P0C2W7 299 aaPredicted RBP17.92■□□□□ 0.46
GPN3-201ENST00000228827 KRT26Q7Z3Y9 468 aa17.92■□□□□ 0.46
GPN3-201ENST00000228827 PUS3Q9BZE2 481 aaKnown RBP17.92■□□□□ 0.46
GPN3-201ENST00000228827 GGA3Q9NZ52 723 aa17.92■□□□□ 0.46
GPN3-201ENST00000228827 NOB1Q9ULX3 412 aaKnown RBP17.92■□□□□ 0.46
GPN3-201ENST00000228827 SCARF1Q14162 830 aa17.91■□□□□ 0.46
GPN3-201ENST00000228827 ANKRD44Q8N8A2 993 aa17.91■□□□□ 0.46
GPN3-201ENST00000228827 MYOZ2Q9NPC6 264 aa17.91■□□□□ 0.46
GPN3-201ENST00000228827 TLL2Q9Y6L7 1015 aa17.91■□□□□ 0.46
GPN3-201ENST00000228827 GTF2IP78347 998 aa17.9■□□□□ 0.46
GPN3-201ENST00000228827 STRIP1Q5VSL9 837 aa17.9■□□□□ 0.46
GPN3-201ENST00000228827 TTLL5Q6EMB2 1281 aa17.9■□□□□ 0.46
GPN3-201ENST00000228827 CYP4F22Q6NT55 531 aa17.9■□□□□ 0.46
GPN3-201ENST00000228827 USP44Q9H0E7 712 aa17.9■□□□□ 0.46
GPN3-201ENST00000228827 CD209Q9NNX6 404 aa17.9■□□□□ 0.46
GPN3-201ENST00000228827 WDR33Q9C0J8 1336 aaKnown RBP17.9■□□□□ 0.46
GPN3-201ENST00000228827 ZNF609O15014 1411 aa17.9■□□□□ 0.46
GPN3-201ENST00000228827 CAPNS2Q96L46 248 aa17.89■□□□□ 0.45
GPN3-201ENST00000228827 IRS2Q9Y4H2 1338 aa17.89■□□□□ 0.45
GPN3-201ENST00000228827 RARSP54136 660 aaKnown RBP17.88■□□□□ 0.45
GPN3-201ENST00000228827 RABL6Q3YEC7 729 aaPredicted RBP17.88■□□□□ 0.45
GPN3-201ENST00000228827 ANGEL2Q5VTE6 544 aaKnown RBP17.88■□□□□ 0.45
GPN3-201ENST00000228827 HNRNPUQ00839 825 aaKnown RBP eCLIP17.88■□□□□ 0.45
GPN3-201ENST00000228827 COL13A1Q5TAT6 717 aaPredicted RBP17.88■□□□□ 0.45
GPN3-201ENST00000228827 C15orf52Q6ZUT6 534 aaKnown RBP17.88■□□□□ 0.45
GPN3-201ENST00000228827 ZNF804AQ7Z570 1209 aa17.88■□□□□ 0.45
GPN3-201ENST00000228827 SAPCD2Q86UD0 394 aa17.88■□□□□ 0.45
GPN3-201ENST00000228827 SULF1Q8IWU6 871 aa17.88■□□□□ 0.45
GPN3-201ENST00000228827 OGFOD1Q8N543 542 aa17.88■□□□□ 0.45
GPN3-201ENST00000228827 KLHDC4Q8TBB5 520 aa17.88■□□□□ 0.45
GPN3-201ENST00000228827 SCAF8Q9UPN6 1271 aaKnown RBP17.88■□□□□ 0.45
GPN3-201ENST00000228827 MYO3BQ8WXR4 1341 aa17.88■□□□□ 0.45
GPN3-201ENST00000228827 LRRC24Q50LG9 513 aa17.87■□□□□ 0.45
GPN3-201ENST00000228827 KIAA0825Q8IV33 1275 aa17.87■□□□□ 0.45
GPN3-201ENST00000228827 API5Q9BZZ5 524 aaKnown RBP17.87■□□□□ 0.45
GPN3-201ENST00000228827 JAG2Q9Y219 1238 aa17.87■□□□□ 0.45
GPN3-201ENST00000228827 PCNTO95613 3336 aa17.86■□□□□ 0.45
GPN3-201ENST00000228827 ECE1P42892 770 aa17.86■□□□□ 0.45
GPN3-201ENST00000228827 NBPF9Q3BBW0 867 aa17.86■□□□□ 0.45
GPN3-201ENST00000228827 AIDAQ96BJ3 306 aa17.86■□□□□ 0.45
GPN3-201ENST00000228827 RIPOR2Q9Y4F9 1068 aa17.86■□□□□ 0.45
GPN3-201ENST00000228827 FOXN1O15353 648 aa17.85■□□□□ 0.45
GPN3-201ENST00000228827 AOC2O75106 756 aa17.85■□□□□ 0.45
GPN3-201ENST00000228827 SASH1O94885 1247 aa17.85■□□□□ 0.45
GPN3-201ENST00000228827 BRPF1P55201 1214 aaPredicted RBP17.85■□□□□ 0.45
GPN3-201ENST00000228827 METTL24Q5JXM2 366 aa17.85■□□□□ 0.45
GPN3-201ENST00000228827 MROH5Q6ZUA9 1318 aa17.84■□□□□ 0.45
GPN3-201ENST00000228827 UBTFL1P0CB47 393 aaPredicted RBP17.84■□□□□ 0.45
GPN3-201ENST00000228827 IL1R1P14778 569 aa17.84■□□□□ 0.45
GPN3-201ENST00000228827 GYG1P46976 350 aa17.84■□□□□ 0.45
GPN3-201ENST00000228827 HUNKP57058 714 aa17.84■□□□□ 0.45
GPN3-201ENST00000228827 UBE4AQ14139 1066 aa17.84■□□□□ 0.45
GPN3-201ENST00000228827 CDCA5Q96FF9 252 aa17.84■□□□□ 0.45
GPN3-201ENST00000228827 WBP1LQ9NX94 342 aa17.84■□□□□ 0.45
GPN3-201ENST00000228827 HDAC9Q9UKV0 1011 aa17.84■□□□□ 0.45
GPN3-201ENST00000228827 F8W031 263 aaPredicted RBP17.83■□□□□ 0.45
GPN3-201ENST00000228827 IFFO2Q5TF58 517 aa17.83■□□□□ 0.45
GPN3-201ENST00000228827 CERS5Q8N5B7 392 aa17.83■□□□□ 0.45
GPN3-201ENST00000228827 GBA2Q9HCG7 927 aaPredicted RBP17.83■□□□□ 0.45
GPN3-201ENST00000228827 PSME4Q14997 1843 aa17.83■□□□□ 0.44
GPN3-201ENST00000228827 KIF16BQ96L93 1317 aa17.83■□□□□ 0.44
GPN3-201ENST00000228827 WNT10BO00744 389 aa17.82■□□□□ 0.44
GPN3-201ENST00000228827 C2orf69Q8N8R5 385 aa17.82■□□□□ 0.44
GPN3-201ENST00000228827 PITPNM2Q9BZ72 1349 aa17.82■□□□□ 0.44
GPN3-201ENST00000228827 TRPM7Q96QT4 1865 aa17.82■□□□□ 0.44
GPN3-201ENST00000228827 BCAR3O75815 825 aa17.82■□□□□ 0.44
GPN3-201ENST00000228827 HIBADHP31937 336 aaKnown RBP17.82■□□□□ 0.44
GPN3-201ENST00000228827 MAP2K1Q02750 393 aaPredicted RBP17.82■□□□□ 0.44
GPN3-201ENST00000228827 PRAMEF18Q5VWM3 479 aa17.82■□□□□ 0.44
GPN3-201ENST00000228827 FRAT1Q92837 279 aaPredicted RBP17.82■□□□□ 0.44
GPN3-201ENST00000228827 HHIPL1Q96JK4 782 aa17.82■□□□□ 0.44
GPN3-201ENST00000228827 FAM84BQ96KN1 310 aaPredicted RBP17.82■□□□□ 0.44
GPN3-201ENST00000228827 A0A1B0GUL6 1792 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms