RNA–Protein interactions for RNA: ENST00000221504.12

TRMT1-201, Transcript of tRNA methyltransferase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRMT1, Length 2,179 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRMT1-201ENST00000221504 SPATA32Q96LK8 384 aa17.6■□□□□ 0.41
TRMT1-201ENST00000221504 COL14A1Q05707 1796 aaKnown RBP17.6■□□□□ 0.41
TRMT1-201ENST00000221504 ZFYP08048 801 aaPredicted RBP17.6■□□□□ 0.41
TRMT1-201ENST00000221504 HSP90AB3PQ58FF7 597 aa17.6■□□□□ 0.41
TRMT1-201ENST00000221504 LEO1Q8WVC0 666 aaPredicted RBP17.6■□□□□ 0.41
TRMT1-201ENST00000221504 DDX11Q96FC9 970 aa17.6■□□□□ 0.41
TRMT1-201ENST00000221504 H3BQV1 296 aa17.59■□□□□ 0.41
TRMT1-201ENST00000221504 CYP19A1P11511 503 aaPredicted RBP17.59■□□□□ 0.41
TRMT1-201ENST00000221504 GPTP24298 496 aa17.59■□□□□ 0.41
TRMT1-201ENST00000221504 APOBRQ0VD83 1088 aa17.59■□□□□ 0.41
TRMT1-201ENST00000221504 SCARF1Q14162 830 aa17.59■□□□□ 0.41
TRMT1-201ENST00000221504 IFFO2Q5TF58 517 aa17.59■□□□□ 0.41
TRMT1-201ENST00000221504 SYNE4Q8N205 404 aa17.59■□□□□ 0.41
TRMT1-201ENST00000221504 NSUN7Q8NE18 718 aaKnown RBP17.59■□□□□ 0.41
TRMT1-201ENST00000221504 SLC4A9Q96Q91 983 aa17.59■□□□□ 0.41
TRMT1-201ENST00000221504 TFIP11Q9UBB9 837 aaKnown RBP17.59■□□□□ 0.41
TRMT1-201ENST00000221504 USP25Q9UHP3 1055 aa17.59■□□□□ 0.41
TRMT1-201ENST00000221504 PLCH1Q4KWH8 1693 aa17.59■□□□□ 0.41
TRMT1-201ENST00000221504 MYH3P11055 1940 aa17.59■□□□□ 0.41
TRMT1-201ENST00000221504 LIG1P18858 919 aa17.59■□□□□ 0.41
TRMT1-201ENST00000221504 MYH7P12883 1935 aa17.58■□□□□ 0.4
TRMT1-201ENST00000221504 SOCS7O14512 581 aa17.58■□□□□ 0.4
TRMT1-201ENST00000221504 PTMAP06454 111 aaKnown RBP17.58■□□□□ 0.4
TRMT1-201ENST00000221504 ATP2B3Q16720 1220 aa17.58■□□□□ 0.4
TRMT1-201ENST00000221504 TTLL11Q8NHH1 800 aa17.58■□□□□ 0.4
TRMT1-201ENST00000221504 ZSCAN16Q9H4T2 348 aaPredicted RBP17.58■□□□□ 0.4
TRMT1-201ENST00000221504 RIPOR2Q9Y4F9 1068 aa17.58■□□□□ 0.4
TRMT1-201ENST00000221504 NWD2Q9ULI1 1742 aa17.58■□□□□ 0.4
TRMT1-201ENST00000221504 KAT6BQ8WYB5 2073 aa17.58■□□□□ 0.4
TRMT1-201ENST00000221504 GOLGA6L4A6NEF3 574 aa17.57■□□□□ 0.4
TRMT1-201ENST00000221504 OFD1O75665 1012 aa17.57■□□□□ 0.4
TRMT1-201ENST00000221504 CTDNEP1O95476 244 aa17.57■□□□□ 0.4
TRMT1-201ENST00000221504 ITGA6P23229 1130 aa17.57■□□□□ 0.4
TRMT1-201ENST00000221504 ZAP70P43403 619 aa17.57■□□□□ 0.4
TRMT1-201ENST00000221504 CTSWP56202 376 aa17.57■□□□□ 0.4
TRMT1-201ENST00000221504 HMGN5P82970 282 aaKnown RBP17.57■□□□□ 0.4
TRMT1-201ENST00000221504 WASHC4Q2M389 1173 aa17.57■□□□□ 0.4
TRMT1-201ENST00000221504 METTL24Q5JXM2 366 aa17.57■□□□□ 0.4
TRMT1-201ENST00000221504 TTLL5Q6EMB2 1281 aa17.57■□□□□ 0.4
TRMT1-201ENST00000221504 NUP62CLQ9H1M0 184 aa17.57■□□□□ 0.4
TRMT1-201ENST00000221504 GREM2Q9H772 168 aa17.57■□□□□ 0.4
TRMT1-201ENST00000221504 PTPDC1A2A3K4 754 aa17.57■□□□□ 0.4
TRMT1-201ENST00000221504 FOXP2O15409 715 aa17.57■□□□□ 0.4
TRMT1-201ENST00000221504 CCDC192P0DO97 292 aa17.57■□□□□ 0.4
TRMT1-201ENST00000221504 CTNNA3Q9UI47 895 aa17.57■□□□□ 0.4
TRMT1-201ENST00000221504 ZBTB1Q9Y2K1 713 aa17.57■□□□□ 0.4
TRMT1-201ENST00000221504 MAP3K11Q16584 847 aa17.56■□□□□ 0.4
TRMT1-201ENST00000221504 NAA16Q6N069 864 aaPredicted RBP17.56■□□□□ 0.4
TRMT1-201ENST00000221504 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.56■□□□□ 0.4
TRMT1-201ENST00000221504 LDHAL6AQ6ZMR3 332 aa17.56■□□□□ 0.4
TRMT1-201ENST00000221504 APPBP2Q92624 585 aa17.56■□□□□ 0.4
TRMT1-201ENST00000221504 KIF3AQ9Y496 699 aa17.56■□□□□ 0.4
TRMT1-201ENST00000221504 NUP98P52948 1817 aa17.56■□□□□ 0.4
TRMT1-201ENST00000221504 ADCY5O95622 1261 aa17.56■□□□□ 0.4
TRMT1-201ENST00000221504 FBXL16Q8N461 479 aa17.56■□□□□ 0.4
TRMT1-201ENST00000221504 ZNF274Q96GC6 653 aaPredicted RBP17.56■□□□□ 0.4
TRMT1-201ENST00000221504 SALL1Q9NSC2 1324 aa17.55■□□□□ 0.4
TRMT1-201ENST00000221504 AKAP11Q9UKA4 1901 aa17.55■□□□□ 0.4
TRMT1-201ENST00000221504 MYH15Q9Y2K3 1946 aa17.55■□□□□ 0.4
TRMT1-201ENST00000221504 ANKRD18BA2A2Z9 1011 aa17.55■□□□□ 0.4
TRMT1-201ENST00000221504 IRS4O14654 1257 aaPredicted RBP17.55■□□□□ 0.4
TRMT1-201ENST00000221504 KDM4AO75164 1064 aa17.55■□□□□ 0.4
TRMT1-201ENST00000221504 PDIA3P30101 505 aaKnown RBP17.55■□□□□ 0.4
TRMT1-201ENST00000221504 PI16Q6UXB8 463 aa17.55■□□□□ 0.4
TRMT1-201ENST00000221504 DDX19AQ9NUU7 478 aaKnown RBP17.55■□□□□ 0.4
TRMT1-201ENST00000221504 DACT1Q9NYF0 836 aa17.55■□□□□ 0.4
TRMT1-201ENST00000221504 UBAP1LF5GYI3 381 aa17.55■□□□□ 0.4
TRMT1-201ENST00000221504 CCT2P78371 535 aaKnown RBP17.55■□□□□ 0.4
TRMT1-201ENST00000221504 IMMTQ16891 758 aaKnown RBP17.55■□□□□ 0.4
TRMT1-201ENST00000221504 CHST3Q7LGC8 479 aa17.55■□□□□ 0.4
TRMT1-201ENST00000221504 PGBD1Q96JS3 809 aa17.55■□□□□ 0.4
TRMT1-201ENST00000221504 NCOA5Q9HCD5 579 aaKnown RBP17.55■□□□□ 0.4
TRMT1-201ENST00000221504 WNK3Q9BYP7 1800 aa17.54■□□□□ 0.4
TRMT1-201ENST00000221504 CHMP4CQ96CF2 233 aa17.54■□□□□ 0.4
TRMT1-201ENST00000221504 PUS7LQ9H0K6 701 aaKnown RBP17.54■□□□□ 0.4
TRMT1-201ENST00000221504 CNNM1Q9NRU3 951 aa17.54■□□□□ 0.4
TRMT1-201ENST00000221504 TRMT112Q9UI30 125 aaKnown RBP17.54■□□□□ 0.4
TRMT1-201ENST00000221504 CFAP45Q9UL16 551 aa17.54■□□□□ 0.4
TRMT1-201ENST00000221504 EXOC5O00471 708 aa17.53■□□□□ 0.4
TRMT1-201ENST00000221504 FGAP02671 866 aa17.53■□□□□ 0.4
TRMT1-201ENST00000221504 MCAMP43121 646 aa17.53■□□□□ 0.4
TRMT1-201ENST00000221504 EVCP57679 992 aa17.53■□□□□ 0.4
TRMT1-201ENST00000221504 CAMK4Q16566 473 aa17.53■□□□□ 0.4
TRMT1-201ENST00000221504 VGLL2Q8N8G2 317 aa17.53■□□□□ 0.4
TRMT1-201ENST00000221504 SYTL4Q96C24 671 aaPredicted RBP17.53■□□□□ 0.4
TRMT1-201ENST00000221504 ZNF512BQ96KM6 892 aaPredicted RBP17.53■□□□□ 0.4
TRMT1-201ENST00000221504 TNMDQ9H2S6 317 aa17.53■□□□□ 0.4
TRMT1-201ENST00000221504 NAP1L2Q9ULW6 460 aaPredicted RBP17.53■□□□□ 0.4
TRMT1-201ENST00000221504 COL16A1Q07092 1604 aaPredicted RBP17.53■□□□□ 0.4
TRMT1-201ENST00000221504 ERVV-1B6SEH8 477 aa17.53■□□□□ 0.4
TRMT1-201ENST00000221504 HAND2P61296 217 aa17.53■□□□□ 0.4
TRMT1-201ENST00000221504 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.53■□□□□ 0.41e-6■■■■■ 29.5
TRMT1-201ENST00000221504 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.53■□□□□ 0.4
TRMT1-201ENST00000221504 GPAA1O43292 621 aa17.52■□□□□ 0.4
TRMT1-201ENST00000221504 PDE8AO60658 829 aa17.52■□□□□ 0.4
TRMT1-201ENST00000221504 IL6STP40189 918 aaPredicted RBP17.52■□□□□ 0.4
TRMT1-201ENST00000221504 DZIP3Q86Y13 1208 aaKnown RBP17.52■□□□□ 0.4
TRMT1-201ENST00000221504 BICD2Q8TD16 824 aa17.52■□□□□ 0.4
TRMT1-201ENST00000221504 CLSTN2Q9H4D0 955 aa17.52■□□□□ 0.4
TRMT1-201ENST00000221504 DOT1LQ8TEK3 1739 aa17.52■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms