RNA–Protein interactions for RNA: ENST00000220562.8

EXTL3-201, Transcript of exostosin like glycosyltransferase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXTL3, Length 6,483 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3-201ENST00000220562 ZNF804AQ7Z570 1209 aa20.31■□□□□ 0.84
EXTL3-201ENST00000220562 TNRQ92752 1358 aa20.31■□□□□ 0.84
EXTL3-201ENST00000220562 GNAQP50148 359 aa20.31■□□□□ 0.84
EXTL3-201ENST00000220562 EIF4A2Q14240 407 aaKnown RBP20.31■□□□□ 0.84
EXTL3-201ENST00000220562 NIP7Q9Y221 180 aaKnown RBP eCLIP20.31■□□□□ 0.84
EXTL3-201ENST00000220562 PAIP2Q9BPZ3 127 aaKnown RBP20.3■□□□□ 0.84
EXTL3-201ENST00000220562 RASAL2Q9UJF2 1139 aa20.3■□□□□ 0.84
EXTL3-201ENST00000220562 RNF113AO15541 343 aaKnown RBP20.3■□□□□ 0.84
EXTL3-201ENST00000220562 FERP16591 822 aa20.3■□□□□ 0.84
EXTL3-201ENST00000220562 SPTLC2O15270 562 aa20.3■□□□□ 0.84
EXTL3-201ENST00000220562 SNX21Q969T3 373 aa20.3■□□□□ 0.84
EXTL3-201ENST00000220562 AK2P54819 239 aa20.3■□□□□ 0.84
EXTL3-201ENST00000220562 ARID5AQ03989 594 aa20.3■□□□□ 0.84
EXTL3-201ENST00000220562 SPAG1Q07617 926 aa20.3■□□□□ 0.84
EXTL3-201ENST00000220562 MAGEB6Q8N7X4 407 aa20.29■□□□□ 0.84
EXTL3-201ENST00000220562 MTHFSDQ2M296 383 aaKnown RBP20.29■□□□□ 0.84
EXTL3-201ENST00000220562 PLVAPQ9BX97 442 aa20.29■□□□□ 0.84
EXTL3-201ENST00000220562 TTC12Q9H892 705 aaPredicted RBP20.29■□□□□ 0.84
EXTL3-201ENST00000220562 USP37Q86T82 979 aa20.29■□□□□ 0.84
EXTL3-201ENST00000220562 PPM1EQ8WY54 764 aa20.29■□□□□ 0.84
EXTL3-201ENST00000220562 C6orf50Q9HD87 102 aa20.29■□□□□ 0.84
EXTL3-201ENST00000220562 TNNQ9UQP3 1299 aa20.29■□□□□ 0.84
EXTL3-201ENST00000220562 TERF1P54274 439 aa20.29■□□□□ 0.84
EXTL3-201ENST00000220562 GJC1P36383 396 aa20.28■□□□□ 0.84
EXTL3-201ENST00000220562 RRP36Q96EU6 259 aaKnown RBP20.28■□□□□ 0.84
EXTL3-201ENST00000220562 TTC41PQ6P2S7 1318 aa20.28■□□□□ 0.84
EXTL3-201ENST00000220562 CTAGE9A4FU28 777 aa20.28■□□□□ 0.84
EXTL3-201ENST00000220562 TFCP2Q12800 502 aa20.28■□□□□ 0.84
EXTL3-201ENST00000220562 CREB3L3Q68CJ9 461 aa20.28■□□□□ 0.84
EXTL3-201ENST00000220562 DDX12PQ92771 950 aa20.28■□□□□ 0.84
EXTL3-201ENST00000220562 NLRP3Q96P20 1036 aa20.28■□□□□ 0.84
EXTL3-201ENST00000220562 HDAC9Q9UKV0 1011 aa20.28■□□□□ 0.84
EXTL3-201ENST00000220562 C8orf34Q49A92 452 aa20.28■□□□□ 0.84
EXTL3-201ENST00000220562 TACC1O75410 805 aa20.28■□□□□ 0.84
EXTL3-201ENST00000220562 MIGA1Q8NAN2 632 aa20.28■□□□□ 0.84
EXTL3-201ENST00000220562 TTC16Q8NEE8 873 aa20.28■□□□□ 0.84
EXTL3-201ENST00000220562 MCM7P33993 719 aa20.28■□□□□ 0.84
EXTL3-201ENST00000220562 C6orf163Q5TEZ5 329 aa20.28■□□□□ 0.84
EXTL3-201ENST00000220562 ZRANB1Q9UGI0 708 aa20.28■□□□□ 0.84
EXTL3-201ENST00000220562 TRIM75PA6NK02 468 aa20.27■□□□□ 0.84
EXTL3-201ENST00000220562 TYRO3Q06418 890 aa20.27■□□□□ 0.84
EXTL3-201ENST00000220562 CEP85Q6P2H3 762 aa20.27■□□□□ 0.84
EXTL3-201ENST00000220562 CADPS2Q86UW7 1296 aa20.27■□□□□ 0.84
EXTL3-201ENST00000220562 LRRC59Q96AG4 307 aaKnown RBP20.27■□□□□ 0.84
EXTL3-201ENST00000220562 PABPN1LA6NDY0 278 aaKnown RBP20.27■□□□□ 0.84
EXTL3-201ENST00000220562 KRT222Q8N1A0 295 aa20.27■□□□□ 0.84
EXTL3-201ENST00000220562 SERPINA10Q9UK55 444 aa20.27■□□□□ 0.84
EXTL3-201ENST00000220562 GNAT2P19087 354 aa20.27■□□□□ 0.83
EXTL3-201ENST00000220562 UBXN1Q04323 297 aa20.27■□□□□ 0.83
EXTL3-201ENST00000220562 ZNF354CQ86Y25 554 aa20.27■□□□□ 0.83
EXTL3-201ENST00000220562 ZHX1Q9UKY1 873 aaPredicted RBP20.27■□□□□ 0.83
EXTL3-201ENST00000220562 MSH6P52701 1360 aa20.27■□□□□ 0.83
EXTL3-201ENST00000220562 LMOD1P29536 600 aaPredicted RBP20.26■□□□□ 0.83
EXTL3-201ENST00000220562 RUFY3Q7L099 469 aa20.26■□□□□ 0.83
EXTL3-201ENST00000220562 DZIP3Q86Y13 1208 aaKnown RBP20.26■□□□□ 0.83
EXTL3-201ENST00000220562 CAPZA3Q96KX2 299 aa20.26■□□□□ 0.83
EXTL3-201ENST00000220562 ARFGAP3Q9NP61 516 aa20.26■□□□□ 0.83
EXTL3-201ENST00000220562 PRIM1P49642 420 aaKnown RBP20.26■□□□□ 0.83
EXTL3-201ENST00000220562 CWF19L2Q2TBE0 894 aaKnown RBP20.26■□□□□ 0.83
EXTL3-201ENST00000220562 GSTA5Q7RTV2 222 aa20.26■□□□□ 0.83
EXTL3-201ENST00000220562 STX17P56962 302 aa20.25■□□□□ 0.83
EXTL3-201ENST00000220562 MCM6Q14566 821 aa20.25■□□□□ 0.83
EXTL3-201ENST00000220562 SIRT1Q96EB6 747 aa20.25■□□□□ 0.83
EXTL3-201ENST00000220562 XRCC6P12956 609 aaKnown RBP eCLIP20.25■□□□□ 0.83
EXTL3-201ENST00000220562 TRAF1Q13077 416 aa20.25■□□□□ 0.83
EXTL3-201ENST00000220562 RXRAP19793 462 aa20.25■□□□□ 0.83
EXTL3-201ENST00000220562 PTPDC1A2A3K4 754 aa20.25■□□□□ 0.83
EXTL3-201ENST00000220562 PRPHP41219 470 aa20.25■□□□□ 0.83
EXTL3-201ENST00000220562 KRT83P78385 493 aa20.25■□□□□ 0.83
EXTL3-201ENST00000220562 NSRP1Q9H0G5 558 aaKnown RBP20.24■□□□□ 0.83
EXTL3-201ENST00000220562 FAM13AO94988 1023 aa20.24■□□□□ 0.83
EXTL3-201ENST00000220562 KIF4AO95239 1232 aa20.24■□□□□ 0.83
EXTL3-201ENST00000220562 GOLGA1Q92805 767 aa20.24■□□□□ 0.83
EXTL3-201ENST00000220562 IQCGQ9H095 443 aaKnown RBP20.24■□□□□ 0.83
EXTL3-201ENST00000220562 MCM9Q9NXL9 1143 aa20.24■□□□□ 0.83
EXTL3-201ENST00000220562 EEF2P13639 858 aaKnown RBP20.24■□□□□ 0.83
EXTL3-201ENST00000220562 KARSQ15046 597 aaKnown RBP20.24■□□□□ 0.83
EXTL3-201ENST00000220562 NYXQ9GZU5 481 aa20.24■□□□□ 0.83
EXTL3-201ENST00000220562 TSPYL6Q8N831 410 aa20.23■□□□□ 0.83
EXTL3-201ENST00000220562 NFATC2IPQ8NCF5 419 aa20.23■□□□□ 0.83
EXTL3-201ENST00000220562 DUOX2Q9NRD8 1548 aa20.23■□□□□ 0.83
EXTL3-201ENST00000220562 BICDL2A1A5D9 508 aa20.23■□□□□ 0.83
EXTL3-201ENST00000220562 SPDYE3A6NKU9 549 aa20.23■□□□□ 0.83
EXTL3-201ENST00000220562 CA8P35219 290 aa20.23■□□□□ 0.83
EXTL3-201ENST00000220562 KRT79Q5XKE5 535 aa20.23■□□□□ 0.83
EXTL3-201ENST00000220562 HELBQ8NG08 1087 aaPredicted RBP20.23■□□□□ 0.83
EXTL3-201ENST00000220562 SREK1Q8WXA9 508 aaKnown RBP20.23■□□□□ 0.83
EXTL3-201ENST00000220562 TNNI2P48788 182 aa20.23■□□□□ 0.83
EXTL3-201ENST00000220562 CCDC50Q8IVM0 306 aa20.23■□□□□ 0.83
EXTL3-201ENST00000220562 LMBR1Q8WVP7 490 aa20.23■□□□□ 0.83
EXTL3-201ENST00000220562 PLIN2Q99541 437 aa20.23■□□□□ 0.83
EXTL3-201ENST00000220562 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.23■□□□□ 0.83
EXTL3-201ENST00000220562 V9GYY5 206 aaPredicted RBP20.23■□□□□ 0.83
EXTL3-201ENST00000220562 DPH6Q7L8W6 267 aa20.23■□□□□ 0.83
EXTL3-201ENST00000220562 GPATCH11Q8N954 259 aa20.23■□□□□ 0.83
EXTL3-201ENST00000220562 CALML3P27482 149 aa20.23■□□□□ 0.83
EXTL3-201ENST00000220562 NEK11Q8NG66 645 aa20.23■□□□□ 0.83
EXTL3-201ENST00000220562 MAP3K5Q99683 1374 aa20.23■□□□□ 0.83
EXTL3-201ENST00000220562 PLS1Q14651 629 aa20.22■□□□□ 0.83
EXTL3-201ENST00000220562 ITSN2Q9NZM3 1697 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms