RNA–Protein interactions for RNA: ENST00000220509.9

VPS18-201, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS18, Length 3,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-201ENST00000220509 KINO60870 393 aaKnown RBP12.27□□□□□ -0.45
VPS18-201ENST00000220509 DNM1Q05193 864 aaKnown RBP12.27□□□□□ -0.45
VPS18-201ENST00000220509 DHX16O60231 1041 aaKnown RBP12.27□□□□□ -0.45
VPS18-201ENST00000220509 STK38Q15208 465 aa12.27□□□□□ -0.45
VPS18-201ENST00000220509 NBPF10Q6P3W6 841 aaKnown RBP12.27□□□□□ -0.45
VPS18-201ENST00000220509 SUCLG2Q96I99 432 aa12.27□□□□□ -0.45
VPS18-201ENST00000220509 BABAM1Q9NWV8 329 aa12.27□□□□□ -0.45
VPS18-201ENST00000220509 KIF20BQ96Q89 1820 aa12.27□□□□□ -0.45
VPS18-201ENST00000220509 RGPD8O14715 1765 aaPredicted RBP12.26□□□□□ -0.45
VPS18-201ENST00000220509 RAD21O60216 631 aa12.26□□□□□ -0.45
VPS18-201ENST00000220509 SAFBQ15424 915 aaKnown RBP eCLIP12.26□□□□□ -0.45
VPS18-201ENST00000220509 RAB11FIP4Q86YS3 637 aa12.26□□□□□ -0.45
VPS18-201ENST00000220509 TNMDQ9H2S6 317 aa12.26□□□□□ -0.45
VPS18-201ENST00000220509 SH2B1Q9NRF2 756 aaPredicted RBP12.26□□□□□ -0.45
VPS18-201ENST00000220509 CCAR2Q8N163 923 aaKnown RBP12.26□□□□□ -0.45
VPS18-201ENST00000220509 U3KPZ7 1027 aaPredicted RBP12.26□□□□□ -0.45
VPS18-201ENST00000220509 AK2P54819 239 aa12.26□□□□□ -0.45
VPS18-201ENST00000220509 TFCP2Q12800 502 aa12.26□□□□□ -0.45
VPS18-201ENST00000220509 MNS1Q8NEH6 495 aa12.26□□□□□ -0.45
VPS18-201ENST00000220509 AKAP2Q9Y2D5 859 aa12.26□□□□□ -0.45
VPS18-201ENST00000220509 IBTKQ9P2D0 1353 aaPredicted RBP12.26□□□□□ -0.45
VPS18-201ENST00000220509 SHPRHQ149N8 1683 aa12.25□□□□□ -0.45
VPS18-201ENST00000220509 HOXB7P09629 217 aa12.25□□□□□ -0.45
VPS18-201ENST00000220509 LRP2BPQ9P2M1 347 aa12.25□□□□□ -0.45
VPS18-201ENST00000220509 CTNNA3Q9UI47 895 aa12.25□□□□□ -0.45
VPS18-201ENST00000220509 POLR3GO15318 223 aaPredicted RBP12.25□□□□□ -0.45
VPS18-201ENST00000220509 TOM1O60784 492 aa12.25□□□□□ -0.45
VPS18-201ENST00000220509 TIMM10P62072 90 aa12.25□□□□□ -0.45
VPS18-201ENST00000220509 IMMTQ16891 758 aaKnown RBP12.25□□□□□ -0.45
VPS18-201ENST00000220509 FAM182BQ5T319 152 aa12.25□□□□□ -0.45
VPS18-201ENST00000220509 SART3Q15020 963 aaKnown RBP12.25□□□□□ -0.45
VPS18-201ENST00000220509 MFSD4BQ5TF39 518 aa12.25□□□□□ -0.45
VPS18-201ENST00000220509 C10orf67Q8IYJ2 551 aa12.25□□□□□ -0.45
VPS18-201ENST00000220509 DONSONQ9NYP3 566 aa12.25□□□□□ -0.45
VPS18-201ENST00000220509 PES1O00541 588 aaKnown RBP12.24□□□□□ -0.45
VPS18-201ENST00000220509 RPAINQ86UA6 219 aa12.24□□□□□ -0.45
VPS18-201ENST00000220509 BRF1Q92994 677 aa12.24□□□□□ -0.45
VPS18-201ENST00000220509 AIDAQ96BJ3 306 aa12.24□□□□□ -0.45
VPS18-201ENST00000220509 BRD1O95696 1058 aa12.24□□□□□ -0.45
VPS18-201ENST00000220509 GABPB1Q06547 395 aaPredicted RBP12.24□□□□□ -0.45
VPS18-201ENST00000220509 HOMER1Q86YM7 354 aa12.24□□□□□ -0.45
VPS18-201ENST00000220509 PRPF38AQ8NAV1 312 aaKnown RBP12.24□□□□□ -0.45
VPS18-201ENST00000220509 NUP133Q8WUM0 1156 aa12.24□□□□□ -0.45
VPS18-201ENST00000220509 NEK1Q96PY6 1258 aa12.24□□□□□ -0.45
VPS18-201ENST00000220509 ASAP1Q9ULH1 1129 aa12.24□□□□□ -0.45
VPS18-201ENST00000220509 NCOA3Q9Y6Q9 1424 aa12.24□□□□□ -0.45
VPS18-201ENST00000220509 TTC41PQ6P2S7 1318 aa12.24□□□□□ -0.45
VPS18-201ENST00000220509 GTF2F1P35269 517 aaKnown RBP eCLIP12.24□□□□□ -0.45
VPS18-201ENST00000220509 DDB1Q16531 1140 aa12.24□□□□□ -0.45
VPS18-201ENST00000220509 UNC5CLQ8IV45 518 aa12.24□□□□□ -0.45
VPS18-201ENST00000220509 CCDC82Q8N4S0 544 aa12.24□□□□□ -0.45
VPS18-201ENST00000220509 EDC3Q96F86 508 aaKnown RBP12.24□□□□□ -0.45
VPS18-201ENST00000220509 FAM227BQ96M60 508 aa12.24□□□□□ -0.45
VPS18-201ENST00000220509 CRB1P82279 1406 aa12.24□□□□□ -0.45
VPS18-201ENST00000220509 PCDH11XQ9BZA7 1347 aa12.23□□□□□ -0.45
VPS18-201ENST00000220509 PCDH11YQ9BZA8 1340 aa12.23□□□□□ -0.45
VPS18-201ENST00000220509 KCNQ4P56696 695 aa12.23□□□□□ -0.45
VPS18-201ENST00000220509 SKIDA1Q1XH10 827 aa12.23□□□□□ -0.45
VPS18-201ENST00000220509 SSH3Q8TE77 659 aa12.23□□□□□ -0.45
VPS18-201ENST00000220509 NUP62CLQ9H1M0 184 aa12.23□□□□□ -0.45
VPS18-201ENST00000220509 KDRP35968 1356 aa12.23□□□□□ -0.45
VPS18-201ENST00000220509 ANKRD18BA2A2Z9 1011 aa12.23□□□□□ -0.45
VPS18-201ENST00000220509 IGHMBP2P38935 993 aaKnown RBP12.23□□□□□ -0.45
VPS18-201ENST00000220509 BEND3Q5T5X7 828 aa12.23□□□□□ -0.45
VPS18-201ENST00000220509 TTLL7Q6ZT98 887 aa12.23□□□□□ -0.45
VPS18-201ENST00000220509 DNAJC10Q8IXB1 793 aa12.23□□□□□ -0.45
VPS18-201ENST00000220509 ZSCAN25Q6NSZ9 544 aa12.23□□□□□ -0.45
VPS18-201ENST00000220509 ZNF396Q96N95 335 aaPredicted RBP12.23□□□□□ -0.45
VPS18-201ENST00000220509 NRBP1Q9UHY1 535 aa12.23□□□□□ -0.45
VPS18-201ENST00000220509 RBM5P52756 815 aaKnown RBP eCLIP12.22□□□□□ -0.45
VPS18-201ENST00000220509 FAM89AQ96GI7 184 aa12.22□□□□□ -0.45
VPS18-201ENST00000220509 DBNDD2Q9BQY9 259 aa12.22□□□□□ -0.45
VPS18-201ENST00000220509 METTL22Q9BUU2 404 aaPredicted RBP12.22□□□□□ -0.45
VPS18-201ENST00000220509 USP32Q8NFA0 1604 aa12.22□□□□□ -0.45
VPS18-201ENST00000220509 TPM3P06753 285 aa12.22□□□□□ -0.45
VPS18-201ENST00000220509 UBE2HP62256 183 aa12.22□□□□□ -0.45
VPS18-201ENST00000220509 ZKSCAN8Q15776 578 aaPredicted RBP12.22□□□□□ -0.45
VPS18-201ENST00000220509 FAM98CQ17RN3 349 aaKnown RBP12.22□□□□□ -0.45
VPS18-201ENST00000220509 CHST3Q7LGC8 479 aa12.22□□□□□ -0.45
VPS18-201ENST00000220509 NACAP1Q9BZK3 213 aa12.22□□□□□ -0.45
VPS18-201ENST00000220509 SGSM2O43147 1006 aa12.22□□□□□ -0.45
VPS18-201ENST00000220509 GCKRQ14397 625 aa12.22□□□□□ -0.45
VPS18-201ENST00000220509 MAP3K11Q16584 847 aa12.22□□□□□ -0.45
VPS18-201ENST00000220509 GTF3C6Q969F1 213 aa12.22□□□□□ -0.45
VPS18-201ENST00000220509 ZNF594Q96JF6 807 aaPredicted RBP12.22□□□□□ -0.45
VPS18-201ENST00000220509 CXorf56Q9H5V9 222 aa12.22□□□□□ -0.45
VPS18-201ENST00000220509 CLIP2Q9UDT6 1046 aa12.22□□□□□ -0.45
VPS18-201ENST00000220509 WDR17Q8IZU2 1322 aa12.22□□□□□ -0.45
VPS18-201ENST00000220509 SSH2Q76I76 1423 aa12.21□□□□□ -0.45
VPS18-201ENST00000220509 CYP2E1P05181 493 aaPredicted RBP12.21□□□□□ -0.45
VPS18-201ENST00000220509 CREB3L3Q68CJ9 461 aa12.21□□□□□ -0.45
VPS18-201ENST00000220509 AMOTL1Q8IY63 956 aa12.21□□□□□ -0.45
VPS18-201ENST00000220509 HELBQ8NG08 1087 aaPredicted RBP12.21□□□□□ -0.45
VPS18-201ENST00000220509 IRAK4Q9NWZ3 460 aa12.21□□□□□ -0.45
VPS18-201ENST00000220509 KIF24Q5T7B8 1368 aa12.21□□□□□ -0.45
VPS18-201ENST00000220509 ZSCAN22P10073 491 aaPredicted RBP12.21□□□□□ -0.45
VPS18-201ENST00000220509 SYT1P21579 422 aa12.21□□□□□ -0.45
VPS18-201ENST00000220509 CCDC96Q2M329 555 aa12.21□□□□□ -0.45
VPS18-201ENST00000220509 CCDC129Q6ZRS4 1044 aa12.21□□□□□ -0.45
VPS18-201ENST00000220509 CFAP45Q9UL16 551 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms