RNA–Protein interactions for RNA: ENST00000219689.11

USP31-201, Transcript of ubiquitin specific peptidase 31, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP31, Length 10,699 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP31-201ENST00000219689 AKR1B15C9JRZ8 316 aaPredicted RBP12.5□□□□□ -0.41
USP31-201ENST00000219689 KIF1CO43896 1103 aaKnown RBP12.5□□□□□ -0.41
USP31-201ENST00000219689 KANK3Q6NY19 840 aa12.5□□□□□ -0.41
USP31-201ENST00000219689 LONRF3Q496Y0 759 aa12.5□□□□□ -0.41
USP31-201ENST00000219689 EPSTI1Q96J88 318 aa12.5□□□□□ -0.41
USP31-201ENST00000219689 CBX8Q9HC52 389 aa12.5□□□□□ -0.41
USP31-201ENST00000219689 KRT83P78385 493 aa12.49□□□□□ -0.41
USP31-201ENST00000219689 CAPS2Q9BXY5 557 aa12.49□□□□□ -0.41
USP31-201ENST00000219689 AEBP2Q6ZN18 517 aaPredicted RBP12.49□□□□□ -0.41
USP31-201ENST00000219689 CCDC122Q5T0U0 273 aa12.49□□□□□ -0.41
USP31-201ENST00000219689 RASIP1Q5U651 963 aa12.49□□□□□ -0.41
USP31-201ENST00000219689 SPATS2Q86XZ4 545 aaKnown RBP12.49□□□□□ -0.41
USP31-201ENST00000219689 SAMM50Q9Y512 469 aa12.49□□□□□ -0.41
USP31-201ENST00000219689 HNRNPH2P55795 449 aaKnown RBP12.49□□□□□ -0.41
USP31-201ENST00000219689 POLE2P56282 527 aa12.49□□□□□ -0.41
USP31-201ENST00000219689 NUF2Q9BZD4 464 aa12.49□□□□□ -0.41
USP31-201ENST00000219689 RAD50Q92878 1312 aa12.49□□□□□ -0.41
USP31-201ENST00000219689 IDEP14735 1019 aa12.49□□□□□ -0.41
USP31-201ENST00000219689 PDE6BP35913 854 aa12.49□□□□□ -0.41
USP31-201ENST00000219689 CCT6AP40227 531 aaKnown RBP12.49□□□□□ -0.41
USP31-201ENST00000219689 PPFIA1Q13136 1202 aa12.49□□□□□ -0.41
USP31-201ENST00000219689 TRIM27P14373 513 aa12.49□□□□□ -0.41
USP31-201ENST00000219689 CCDC92Q53HC0 331 aaPredicted RBP12.49□□□□□ -0.41
USP31-201ENST00000219689 TSNARE1Q96NA8 513 aa12.48□□□□□ -0.41
USP31-201ENST00000219689 CCDC77Q9BR77 488 aa12.48□□□□□ -0.41
USP31-201ENST00000219689 SEC31AO94979 1220 aaKnown RBP12.48□□□□□ -0.41
USP31-201ENST00000219689 RRAGBQ5VZM2 374 aa12.48□□□□□ -0.41
USP31-201ENST00000219689 GSTA5Q7RTV2 222 aa12.48□□□□□ -0.41
USP31-201ENST00000219689 CFAP157Q5JU67 520 aa12.48□□□□□ -0.41
USP31-201ENST00000219689 IFT20Q8IY31 132 aa12.48□□□□□ -0.41
USP31-201ENST00000219689 MRPS27Q92552 414 aaKnown RBP12.48□□□□□ -0.41
USP31-201ENST00000219689 HIP1RO75146 1068 aa12.48□□□□□ -0.41
USP31-201ENST00000219689 IFT88Q13099 833 aa12.48□□□□□ -0.41
USP31-201ENST00000219689 COMMD10Q9Y6G5 202 aa12.48□□□□□ -0.41
USP31-201ENST00000219689 ARID1BQ8NFD5 2236 aaPredicted RBP12.48□□□□□ -0.41
USP31-201ENST00000219689 FYB2Q5VWT5 728 aa12.48□□□□□ -0.41
USP31-201ENST00000219689 SDSP20132 328 aa12.48□□□□□ -0.41
USP31-201ENST00000219689 CXorf38Q8TB03 319 aa12.48□□□□□ -0.41
USP31-201ENST00000219689 KIF1BPQ96EK5 621 aa12.48□□□□□ -0.41
USP31-201ENST00000219689 TSC22D3Q99576 134 aa12.48□□□□□ -0.41
USP31-201ENST00000219689 CNNM1Q9NRU3 951 aa12.48□□□□□ -0.41
USP31-201ENST00000219689 ZNF215Q9UL58 517 aaPredicted RBP12.48□□□□□ -0.41
USP31-201ENST00000219689 RPGRIP1LQ68CZ1 1315 aa12.48□□□□□ -0.41
USP31-201ENST00000219689 HDGFL1Q5TGJ6 251 aa12.48□□□□□ -0.41
USP31-201ENST00000219689 GLRX3O76003 335 aaKnown RBP12.47□□□□□ -0.41
USP31-201ENST00000219689 KLHDC4Q8TBB5 520 aa12.47□□□□□ -0.41
USP31-201ENST00000219689 BAG2O95816 211 aa12.47□□□□□ -0.41
USP31-201ENST00000219689 TTC16Q8NEE8 873 aa12.47□□□□□ -0.41
USP31-201ENST00000219689 MMRN2Q9H8L6 949 aa12.47□□□□□ -0.41
USP31-201ENST00000219689 EXOC1Q9NV70 894 aa12.47□□□□□ -0.41
USP31-201ENST00000219689 GNL3LQ9NVN8 582 aaKnown RBP12.47□□□□□ -0.41
USP31-201ENST00000219689 RAD51AP2Q09MP3 1159 aa12.47□□□□□ -0.41
USP31-201ENST00000219689 LRRC45Q96CN5 670 aa12.47□□□□□ -0.41
USP31-201ENST00000219689 RP1P56715 2156 aa12.47□□□□□ -0.41
USP31-201ENST00000219689 FAM71BQ8TC56 605 aa12.47□□□□□ -0.41
USP31-201ENST00000219689 KCNG4Q8TDN1 519 aa12.47□□□□□ -0.41
USP31-201ENST00000219689 GADD45BO75293 160 aaPredicted RBP12.47□□□□□ -0.41
USP31-201ENST00000219689 TMPOP42166 694 aaKnown RBP12.47□□□□□ -0.41
USP31-201ENST00000219689 ATICP31939 592 aa12.46□□□□□ -0.41
USP31-201ENST00000219689 ZSCAN25Q6NSZ9 544 aa12.46□□□□□ -0.41
USP31-201ENST00000219689 C8orf74Q6P047 294 aa12.46□□□□□ -0.41
USP31-201ENST00000219689 SEC63Q9UGP8 760 aaKnown RBP12.46□□□□□ -0.41
USP31-201ENST00000219689 UTP11Q9Y3A2 253 aaKnown RBP12.46□□□□□ -0.41
USP31-201ENST00000219689 IQCA1Q86XH1 822 aa12.46□□□□□ -0.41
USP31-201ENST00000219689 BRD3Q15059 726 aa12.46□□□□□ -0.41
USP31-201ENST00000219689 VPS52Q8N1B4 723 aa12.46□□□□□ -0.41
USP31-201ENST00000219689 MYH3P11055 1940 aa12.46□□□□□ -0.41
USP31-201ENST00000219689 ICE1Q9Y2F5 2266 aa12.46□□□□□ -0.41
USP31-201ENST00000219689 ATP5DP30049 168 aa12.46□□□□□ -0.41
USP31-201ENST00000219689 PCDHB15Q9Y5E8 787 aa12.46□□□□□ -0.41
USP31-201ENST00000219689 MAGEA9P43362 315 aa12.46□□□□□ -0.41
USP31-201ENST00000219689 VSIG1Q86XK7 387 aa12.46□□□□□ -0.41
USP31-201ENST00000219689 CCDC65Q8IXS2 484 aa12.46□□□□□ -0.41
USP31-201ENST00000219689 BCAS4Q8TDM0 211 aa12.46□□□□□ -0.41
USP31-201ENST00000219689 PLVAPQ9BX97 442 aa12.46□□□□□ -0.41
USP31-201ENST00000219689 TNNC1P63316 161 aa12.46□□□□□ -0.42
USP31-201ENST00000219689 TCERG1LQ5VWI1 586 aa12.46□□□□□ -0.42
USP31-201ENST00000219689 TBC1D5Q92609 795 aa12.46□□□□□ -0.42
USP31-201ENST00000219689 FAM212AQ96EL1 285 aa12.46□□□□□ -0.42
USP31-201ENST00000219689 MYOM3Q5VTT5 1437 aa12.46□□□□□ -0.42
USP31-201ENST00000219689 USP5P45974 858 aa12.46□□□□□ -0.42
USP31-201ENST00000219689 PSMD6Q15008 389 aa12.46□□□□□ -0.42
USP31-201ENST00000219689 ERCC5P28715 1186 aaPredicted RBP12.45□□□□□ -0.42
USP31-201ENST00000219689 FAM204AQ9H8W3 233 aa12.45□□□□□ -0.42
USP31-201ENST00000219689 GUCY2FP51841 1108 aa12.45□□□□□ -0.42
USP31-201ENST00000219689 SLC12A7Q9Y666 1083 aa12.45□□□□□ -0.42
USP31-201ENST00000219689 RASSF2P50749 326 aa12.45□□□□□ -0.42
USP31-201ENST00000219689 TUBB2AQ13885 445 aa12.45□□□□□ -0.42
USP31-201ENST00000219689 TUBB2BQ9BVA1 445 aa12.45□□□□□ -0.42
USP31-201ENST00000219689 LRRC2Q9BYS8 371 aa12.45□□□□□ -0.42
USP31-201ENST00000219689 MTRF1LQ9UGC7 380 aaKnown RBP12.45□□□□□ -0.42
USP31-201ENST00000219689 GIGYF1O75420 1035 aaPredicted RBP12.45□□□□□ -0.42
USP31-201ENST00000219689 CCDC110Q8TBZ0 833 aa12.45□□□□□ -0.42
USP31-201ENST00000219689 hCG_2014768A0A024R1R8 64 aa12.45□□□□□ -0.42
USP31-201ENST00000219689 RGS22Q8NE09 1264 aa12.45□□□□□ -0.42
USP31-201ENST00000219689 LMBRD1Q9NUN5 540 aa12.45□□□□□ -0.42
USP31-201ENST00000219689 BICC1Q9H694 974 aaKnown RBP12.45□□□□□ -0.42
USP31-201ENST00000219689 UAP1Q16222 522 aaPredicted RBP12.44□□□□□ -0.42
USP31-201ENST00000219689 SND1Q7KZF4 910 aaKnown RBP eCLIP12.44□□□□□ -0.42
USP31-201ENST00000219689 ACTN2P35609 894 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms