RNA–Protein interactions for RNA: ENST00000219084.10

CHD9-201, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 8,739 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-201ENST00000219084 NUCKS1Q9H1E3 243 aaKnown RBP5.01□□□□□ -1.61
CHD9-201ENST00000219084 KIF4AO95239 1232 aa5.01□□□□□ -1.61
CHD9-201ENST00000219084 LMAN1P49257 510 aa5.01□□□□□ -1.61
CHD9-201ENST00000219084 KIF5AQ12840 1032 aa5.01□□□□□ -1.61
CHD9-201ENST00000219084 RHPN1Q8TCX5 695 aa5.01□□□□□ -1.61
CHD9-201ENST00000219084 PIBF1Q8WXW3 757 aa5.01□□□□□ -1.61
CHD9-201ENST00000219084 MAP3K2Q9Y2U5 619 aa5.01□□□□□ -1.61
CHD9-201ENST00000219084 DISP1Q96F81 1524 aa5.01□□□□□ -1.61
CHD9-201ENST00000219084 ARHGAP25P42331 645 aa5.01□□□□□ -1.61
CHD9-201ENST00000219084 NLRP5P59047 1200 aa5.01□□□□□ -1.61
CHD9-201ENST00000219084 MCM10Q7L590 875 aa5.01□□□□□ -1.61
CHD9-201ENST00000219084 CKAP2LQ8IYA6 745 aa5.01□□□□□ -1.61
CHD9-201ENST00000219084 ZNF444Q8N0Y2 327 aaPredicted RBP5.01□□□□□ -1.61
CHD9-201ENST00000219084 YTHDC2Q9H6S0 1430 aaKnown RBP5.01□□□□□ -1.61
CHD9-201ENST00000219084 N4BP3O15049 544 aa5.01□□□□□ -1.61
CHD9-201ENST00000219084 ZBTB43O43298 467 aa5.01□□□□□ -1.61
CHD9-201ENST00000219084 IGHDP01880 384 aa5.01□□□□□ -1.61
CHD9-201ENST00000219084 TNNC1P63316 161 aa5.01□□□□□ -1.61
CHD9-201ENST00000219084 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.01□□□□□ -1.61
CHD9-201ENST00000219084 ORC3Q9UBD5 711 aaPredicted RBP5.01□□□□□ -1.61
CHD9-201ENST00000219084 SPATA31E1Q6ZUB1 1445 aa5.01□□□□□ -1.61
CHD9-201ENST00000219084 HCLS1P14317 486 aaPredicted RBP5.01□□□□□ -1.61
CHD9-201ENST00000219084 WTAPQ15007 396 aa5.01□□□□□ -1.61
CHD9-201ENST00000219084 BOLA2Q9H3K6 86 aa5.01□□□□□ -1.61
CHD9-201ENST00000219084 USP16Q9Y5T5 823 aa5.01□□□□□ -1.61
CHD9-201ENST00000219084 GRM8O00222 908 aa5.01□□□□□ -1.61
CHD9-201ENST00000219084 SPTLC2O15270 562 aa5.01□□□□□ -1.61
CHD9-201ENST00000219084 ATP2A2P16615 1042 aaKnown RBP5.01□□□□□ -1.61
CHD9-201ENST00000219084 CCDC96Q2M329 555 aa5.01□□□□□ -1.61
CHD9-201ENST00000219084 TTC31Q49AM3 519 aaPredicted RBP5.01□□□□□ -1.61
CHD9-201ENST00000219084 CYB5RLQ6IPT4 315 aa5.01□□□□□ -1.61
CHD9-201ENST00000219084 TSNARE1Q96NA8 513 aa5.01□□□□□ -1.61
CHD9-201ENST00000219084 RBM42Q9BTD8 480 aaKnown RBP5.01□□□□□ -1.61
CHD9-201ENST00000219084 KAT14Q9H8E8 782 aa5.01□□□□□ -1.61
CHD9-201ENST00000219084 PRDM11Q9NQV5 511 aa5.01□□□□□ -1.61
CHD9-201ENST00000219084 ALDH3A1P30838 453 aa5.01□□□□□ -1.61
CHD9-201ENST00000219084 RTN1Q16799 776 aa5.01□□□□□ -1.61
CHD9-201ENST00000219084 CCDC121Q6ZUS5 278 aa5.01□□□□□ -1.61
CHD9-201ENST00000219084 DDX46Q7L014 1031 aaKnown RBP5.01□□□□□ -1.61
CHD9-201ENST00000219084 MSANTD4Q8NCY6 345 aa5.01□□□□□ -1.61
CHD9-201ENST00000219084 FAM76AQ8TAV0 307 aa5.01□□□□□ -1.61
CHD9-201ENST00000219084 CCDC51Q96ER9 411 aa5.01□□□□□ -1.61
CHD9-201ENST00000219084 USP26Q9BXU7 913 aa5.01□□□□□ -1.61
CHD9-201ENST00000219084 ZHX3Q9H4I2 956 aa5.01□□□□□ -1.61
CHD9-201ENST00000219084 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.01□□□□□ -1.61
CHD9-201ENST00000219084 ADGRF5Q8IZF2 1346 aa5□□□□□ -1.61
CHD9-201ENST00000219084 SBNO1A3KN83 1393 aa5□□□□□ -1.61
CHD9-201ENST00000219084 HLTFQ14527 1009 aaKnown RBP eCLIP5□□□□□ -1.613e-7■■□□□ 11.9
CHD9-201ENST00000219084 CCDC152Q4G0S7 254 aa5□□□□□ -1.61
CHD9-201ENST00000219084 CCDC40Q4G0X9 1142 aa5□□□□□ -1.61
CHD9-201ENST00000219084 SPECC1Q5M775 1068 aa5□□□□□ -1.61
CHD9-201ENST00000219084 C10orf67Q8IYJ2 551 aa5□□□□□ -1.61
CHD9-201ENST00000219084 IFNL2Q8IZJ0 200 aa5□□□□□ -1.61
CHD9-201ENST00000219084 PLCB1Q9NQ66 1216 aa5□□□□□ -1.61
CHD9-201ENST00000219084 ZPR1O75312 459 aa5□□□□□ -1.61
CHD9-201ENST00000219084 GTF2A1P52655 376 aaPredicted RBP5□□□□□ -1.61
CHD9-201ENST00000219084 TDRD12Q587J7 1177 aaKnown RBP5□□□□□ -1.61
CHD9-201ENST00000219084 KSR2Q6VAB6 950 aa5□□□□□ -1.61
CHD9-201ENST00000219084 RSRC1Q96IZ7 334 aaKnown RBP5□□□□□ -1.61
CHD9-201ENST00000219084 TRIM47Q96LD4 638 aa5□□□□□ -1.61
CHD9-201ENST00000219084 CFAP57Q96MR6 1250 aa5□□□□□ -1.61
CHD9-201ENST00000219084 PLCD4Q9BRC7 762 aa5□□□□□ -1.61
CHD9-201ENST00000219084 CDC42BPGQ6DT37 1551 aa5□□□□□ -1.61
CHD9-201ENST00000219084 CDC25BP30305 580 aa5□□□□□ -1.61
CHD9-201ENST00000219084 GBP1P32455 592 aa5□□□□□ -1.61
CHD9-201ENST00000219084 ACTN2P35609 894 aa5□□□□□ -1.61
CHD9-201ENST00000219084 KRT2P35908 639 aa5□□□□□ -1.61
CHD9-201ENST00000219084 AKAP4Q5JQC9 854 aa5□□□□□ -1.61
CHD9-201ENST00000219084 MAATS1Q7Z4T9 603 aa5□□□□□ -1.61
CHD9-201ENST00000219084 LZTS2Q9BRK4 669 aa5□□□□□ -1.61
CHD9-201ENST00000219084 GOPCQ9HD26 462 aa5□□□□□ -1.61
CHD9-201ENST00000219084 MTRF1LQ9UGC7 380 aaKnown RBP5□□□□□ -1.61
CHD9-201ENST00000219084 TSPOAP1O95153 1857 aa5□□□□□ -1.61
CHD9-201ENST00000219084 TBCAO75347 108 aaKnown RBP5□□□□□ -1.61
CHD9-201ENST00000219084 POLR3DP05423 398 aaPredicted RBP5□□□□□ -1.61
CHD9-201ENST00000219084 HLA-DOAP06340 250 aa5□□□□□ -1.61
CHD9-201ENST00000219084 GNA11P29992 359 aa5□□□□□ -1.61
CHD9-201ENST00000219084 KLHL10Q6JEL2 608 aa5□□□□□ -1.61
CHD9-201ENST00000219084 CSRNP2Q9H175 543 aa5□□□□□ -1.61
CHD9-201ENST00000219084 FERP16591 822 aa5□□□□□ -1.61
CHD9-201ENST00000219084 MNAT1P51948 309 aa5□□□□□ -1.61
CHD9-201ENST00000219084 RILPL1Q5EBL4 403 aa5□□□□□ -1.61
CHD9-201ENST00000219084 RNF187Q5TA31 235 aaPredicted RBP5□□□□□ -1.61
CHD9-201ENST00000219084 NAA16Q6N069 864 aaPredicted RBP5□□□□□ -1.61
CHD9-201ENST00000219084 CYP26C1Q6V0L0 522 aa5□□□□□ -1.61
CHD9-201ENST00000219084 DHX32Q7L7V1 743 aaKnown RBP5□□□□□ -1.61
CHD9-201ENST00000219084 CNPY2Q9Y2B0 182 aa5□□□□□ -1.61
CHD9-201ENST00000219084 A0A1B0GUL7 405 aa5□□□□□ -1.61
CHD9-201ENST00000219084 ZNF500O60304 480 aaPredicted RBP5□□□□□ -1.61
CHD9-201ENST00000219084 NT5C2P49902 561 aa5□□□□□ -1.61
CHD9-201ENST00000219084 MYD88Q99836 296 aa5□□□□□ -1.61
CHD9-201ENST00000219084 TM6SF1Q9BZW5 370 aa5□□□□□ -1.61
CHD9-201ENST00000219084 NEBLO76041 1014 aa4.99□□□□□ -1.61
CHD9-201ENST00000219084 GTF2F1P35269 517 aaKnown RBP eCLIP4.99□□□□□ -1.61
CHD9-201ENST00000219084 DNAJC21Q5F1R6 531 aaKnown RBP4.99□□□□□ -1.61
CHD9-201ENST00000219084 CEP85Q6P2H3 762 aa4.99□□□□□ -1.61
CHD9-201ENST00000219084 FERMT3Q86UX7 667 aa4.99□□□□□ -1.61
CHD9-201ENST00000219084 PLEKHM2Q8IWE5 1019 aa4.99□□□□□ -1.61
CHD9-201ENST00000219084 KRI1Q8N9T8 703 aaKnown RBP4.99□□□□□ -1.61
CHD9-201ENST00000219084 CCDC26Q8TAB7 109 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms