RNA–Protein interactions for RNA: ENST00000218348.7

USP11-201, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USP11, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-201ENST00000218348 LMBRD1Q9NUN5 540 aa11.9□□□□□ -0.5
USP11-201ENST00000218348 COL15A1P39059 1388 aa11.9□□□□□ -0.5
USP11-201ENST00000218348 DLEC1Q9Y238 1755 aa11.9□□□□□ -0.5
USP11-201ENST00000218348 IL6STP40189 918 aaPredicted RBP11.9□□□□□ -0.5
USP11-201ENST00000218348 EN1Q05925 392 aaPredicted RBP11.9□□□□□ -0.5
USP11-201ENST00000218348 DEFB132Q7Z7B7 95 aa11.9□□□□□ -0.5
USP11-201ENST00000218348 CCDC87Q9NVE4 849 aa11.9□□□□□ -0.5
USP11-201ENST00000218348 SMC3Q9UQE7 1217 aa11.9□□□□□ -0.5
USP11-201ENST00000218348 A0A1B0GUL6 1792 aa11.9□□□□□ -0.51
USP11-201ENST00000218348 SLC27A2O14975 620 aa11.89□□□□□ -0.51
USP11-201ENST00000218348 RGL2O15211 777 aa11.89□□□□□ -0.51
USP11-201ENST00000218348 TCIRG1Q13488 830 aa11.89□□□□□ -0.51
USP11-201ENST00000218348 L1TD1Q5T7N2 865 aaKnown RBP11.89□□□□□ -0.51
USP11-201ENST00000218348 FAM173BQ6P4H8 233 aa11.89□□□□□ -0.51
USP11-201ENST00000218348 GRPEL1Q9HAV7 217 aa11.89□□□□□ -0.51
USP11-201ENST00000218348 TRMT112Q9UI30 125 aaKnown RBP11.89□□□□□ -0.51
USP11-201ENST00000218348 RABL6Q3YEC7 729 aaPredicted RBP11.89□□□□□ -0.51
USP11-201ENST00000218348 CEP126Q9P2H0 1117 aa11.89□□□□□ -0.51
USP11-201ENST00000218348 LIMCH1Q9UPQ0 1083 aa11.89□□□□□ -0.51
USP11-201ENST00000218348 PNPLA7Q6ZV29 1317 aa11.89□□□□□ -0.51
USP11-201ENST00000218348 CYP2E1P05181 493 aaPredicted RBP11.89□□□□□ -0.51
USP11-201ENST00000218348 IFIT1P09914 478 aaKnown RBP11.89□□□□□ -0.51
USP11-201ENST00000218348 HCLS1P14317 486 aaPredicted RBP11.89□□□□□ -0.51
USP11-201ENST00000218348 CCDC191Q8NCU4 936 aa11.89□□□□□ -0.51
USP11-201ENST00000218348 GPT2Q8TD30 523 aa11.89□□□□□ -0.51
USP11-201ENST00000218348 MYH3P11055 1940 aa11.89□□□□□ -0.51
USP11-201ENST00000218348 USP42Q9H9J4 1324 aaKnown RBP11.89□□□□□ -0.51
USP11-201ENST00000218348 FIBPO43427 364 aa11.88□□□□□ -0.51
USP11-201ENST00000218348 GADD45BO75293 160 aaPredicted RBP11.88□□□□□ -0.51
USP11-201ENST00000218348 CAMTA2O94983 1202 aa11.88□□□□□ -0.51
USP11-201ENST00000218348 MCM2P49736 904 aa11.88□□□□□ -0.51
USP11-201ENST00000218348 ME3Q16798 604 aa11.88□□□□□ -0.51
USP11-201ENST00000218348 WASHC4Q2M389 1173 aa11.88□□□□□ -0.51
USP11-201ENST00000218348 RNF214Q8ND24 703 aa11.88□□□□□ -0.51
USP11-201ENST00000218348 EYA2O00167 538 aa11.88□□□□□ -0.51
USP11-201ENST00000218348 RPS6KA4O75676 772 aa11.88□□□□□ -0.51
USP11-201ENST00000218348 HSP90B1P14625 803 aaKnown RBP11.88□□□□□ -0.51
USP11-201ENST00000218348 HAND2P61296 217 aa11.88□□□□□ -0.51
USP11-201ENST00000218348 NECTIN1Q15223 517 aa11.88□□□□□ -0.51
USP11-201ENST00000218348 GREM2Q9H772 168 aa11.88□□□□□ -0.51
USP11-201ENST00000218348 ATP5JP18859 108 aa11.88□□□□□ -0.51
USP11-201ENST00000218348 GJB2P29033 226 aa11.88□□□□□ -0.51
USP11-201ENST00000218348 TTC14Q96N46 770 aa11.88□□□□□ -0.51
USP11-201ENST00000218348 CNNM1Q9NRU3 951 aa11.88□□□□□ -0.51
USP11-201ENST00000218348 TPCN1Q9ULQ1 816 aa11.88□□□□□ -0.51
USP11-201ENST00000218348 CNPY2Q9Y2B0 182 aa11.88□□□□□ -0.51
USP11-201ENST00000218348 COL11A2P13942 1736 aaPredicted RBP11.88□□□□□ -0.51
USP11-201ENST00000218348 LRP5O75197 1615 aa11.87□□□□□ -0.51
USP11-201ENST00000218348 SYCE3A1L190 88 aa11.87□□□□□ -0.51
USP11-201ENST00000218348 KDM4AO75164 1064 aa11.87□□□□□ -0.51
USP11-201ENST00000218348 IFIT5Q13325 482 aaKnown RBP11.87□□□□□ -0.51
USP11-201ENST00000218348 CUL4AQ13619 759 aa11.87□□□□□ -0.51
USP11-201ENST00000218348 SCARF1Q14162 830 aa11.87□□□□□ -0.51
USP11-201ENST00000218348 BLOC1S2Q6QNY1 142 aa11.87□□□□□ -0.51
USP11-201ENST00000218348 LDHAL6AQ6ZMR3 332 aa11.87□□□□□ -0.51
USP11-201ENST00000218348 BICDL1Q6ZP65 573 aa11.87□□□□□ -0.51
USP11-201ENST00000218348 RAB11FIP4Q86YS3 637 aa11.87□□□□□ -0.51
USP11-201ENST00000218348 DDX11Q96FC9 970 aa11.87□□□□□ -0.51
USP11-201ENST00000218348 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.87□□□□□ -0.51
USP11-201ENST00000218348 TAF5LO75529 589 aa11.87□□□□□ -0.51
USP11-201ENST00000218348 METTL24Q5JXM2 366 aa11.87□□□□□ -0.51
USP11-201ENST00000218348 PPP4R3BQ5MIZ7 849 aa11.87□□□□□ -0.51
USP11-201ENST00000218348 TTLL5Q6EMB2 1281 aa11.87□□□□□ -0.51
USP11-201ENST00000218348 DZIP3Q86Y13 1208 aaKnown RBP11.87□□□□□ -0.51
USP11-201ENST00000218348 MAP4K1Q92918 833 aa11.87□□□□□ -0.51
USP11-201ENST00000218348 PAG1Q9NWQ8 432 aa11.87□□□□□ -0.51
USP11-201ENST00000218348 FAM13BQ9NYF5 915 aa11.87□□□□□ -0.51
USP11-201ENST00000218348 SRCAPQ6ZRS2 3230 aa11.87□□□□□ -0.51
USP11-201ENST00000218348 BRCA1P38398 1863 aaKnown RBP11.87□□□□□ -0.51
USP11-201ENST00000218348 SYT1P21579 422 aa11.86□□□□□ -0.51
USP11-201ENST00000218348 STK11IPQ8N1F8 1099 aa11.86□□□□□ -0.51
USP11-201ENST00000218348 CCDC24Q8N4L8 307 aa11.86□□□□□ -0.51
USP11-201ENST00000218348 BRD1O95696 1058 aa11.86□□□□□ -0.51
USP11-201ENST00000218348 CLCN1P35523 988 aa11.86□□□□□ -0.51
USP11-201ENST00000218348 SKOR2Q2VWA4 1001 aaPredicted RBP11.86□□□□□ -0.51
USP11-201ENST00000218348 TTC39AQ5SRH9 613 aa11.86□□□□□ -0.51
USP11-201ENST00000218348 ITGA6P23229 1130 aa11.86□□□□□ -0.51
USP11-201ENST00000218348 MPNDQ8N594 471 aa11.86□□□□□ -0.51
USP11-201ENST00000218348 FSD2A1L4K1 749 aa11.85□□□□□ -0.51
USP11-201ENST00000218348 IRS4O14654 1257 aaPredicted RBP11.85□□□□□ -0.51
USP11-201ENST00000218348 IL15P40933 162 aaPredicted RBP11.85□□□□□ -0.51
USP11-201ENST00000218348 KLHL40Q2TBA0 621 aa11.85□□□□□ -0.51
USP11-201ENST00000218348 ZSCAN23Q3MJ62 389 aa11.85□□□□□ -0.51
USP11-201ENST00000218348 TMEM63CQ9P1W3 806 aa11.85□□□□□ -0.51
USP11-201ENST00000218348 IQSEC3Q9UPP2 1182 aaPredicted RBP11.85□□□□□ -0.51
USP11-201ENST00000218348 XAGE2Q96GT9 111 aa11.85□□□□□ -0.51
USP11-201ENST00000218348 MAP3K15Q6ZN16 1313 aa11.85□□□□□ -0.51
USP11-201ENST00000218348 ERVV-1B6SEH8 477 aa11.85□□□□□ -0.51
USP11-201ENST00000218348 HIP1O00291 1037 aa11.85□□□□□ -0.51
USP11-201ENST00000218348 USP48Q86UV5 1035 aa11.85□□□□□ -0.51
USP11-201ENST00000218348 ARHGEF1Q92888 912 aaKnown RBP11.85□□□□□ -0.51
USP11-201ENST00000218348 HAUS7Q99871 368 aa11.85□□□□□ -0.51
USP11-201ENST00000218348 ISCA1Q9BUE6 129 aa11.85□□□□□ -0.51
USP11-201ENST00000218348 UBN2Q6ZU65 1347 aa11.84□□□□□ -0.51
USP11-201ENST00000218348 STX6O43752 255 aa11.84□□□□□ -0.51
USP11-201ENST00000218348 CYP21A2P08686 494 aa11.84□□□□□ -0.51
USP11-201ENST00000218348 ADRA2BP18089 450 aa11.84□□□□□ -0.51
USP11-201ENST00000218348 CDK11BP21127 795 aaKnown RBP11.84□□□□□ -0.51
USP11-201ENST00000218348 ZAP70P43403 619 aa11.84□□□□□ -0.51
USP11-201ENST00000218348 RNF20Q5VTR2 975 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms