RNA–Protein interactions for RNA: ENST00000217133.1

TUBB1-201, Transcript of tubulin beta 1 class VI, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB1, Length 3,496 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB1-201ENST00000217133 SCRN1Q12765 414 aa11.26□□□□□ -0.61
TUBB1-201ENST00000217133 NAA16Q6N069 864 aaPredicted RBP11.26□□□□□ -0.61
TUBB1-201ENST00000217133 MRPS27Q92552 414 aaKnown RBP11.26□□□□□ -0.61
TUBB1-201ENST00000217133 OSBPL5Q9H0X9 879 aaPredicted RBP11.26□□□□□ -0.61
TUBB1-201ENST00000217133 LTBP4Q8N2S1 1624 aa11.25□□□□□ -0.61
TUBB1-201ENST00000217133 PTPDC1A2A3K4 754 aa11.25□□□□□ -0.61
TUBB1-201ENST00000217133 URI1O94763 535 aaPredicted RBP11.25□□□□□ -0.61
TUBB1-201ENST00000217133 PNMA6AP0CW24 399 aaPredicted RBP11.25□□□□□ -0.61
TUBB1-201ENST00000217133 H2AFXP16104 143 aaPredicted RBP11.25□□□□□ -0.61
TUBB1-201ENST00000217133 STK38Q15208 465 aa11.25□□□□□ -0.61
TUBB1-201ENST00000217133 SUCLG2Q96I99 432 aa11.25□□□□□ -0.61
TUBB1-201ENST00000217133 BICC1Q9H694 974 aaKnown RBP11.25□□□□□ -0.61
TUBB1-201ENST00000217133 A0A1B0GVL5 298 aa11.25□□□□□ -0.61
TUBB1-201ENST00000217133 GRM8O00222 908 aa11.25□□□□□ -0.61
TUBB1-201ENST00000217133 CCP110O43303 1012 aa11.25□□□□□ -0.61
TUBB1-201ENST00000217133 KSR2Q6VAB6 950 aa11.25□□□□□ -0.61
TUBB1-201ENST00000217133 CCDC129Q6ZRS4 1044 aa11.25□□□□□ -0.61
TUBB1-201ENST00000217133 L2HGDHQ9H9P8 463 aa11.25□□□□□ -0.61
TUBB1-201ENST00000217133 CCDC9Q9Y3X0 531 aaKnown RBP11.25□□□□□ -0.61
TUBB1-201ENST00000217133 ADCY9O60503 1353 aa11.25□□□□□ -0.61
TUBB1-201ENST00000217133 PSDA5PKW4 1024 aaPredicted RBP11.25□□□□□ -0.61
TUBB1-201ENST00000217133 GNL2Q13823 731 aaKnown RBP11.25□□□□□ -0.61
TUBB1-201ENST00000217133 DHX8Q14562 1220 aaKnown RBP11.25□□□□□ -0.61
TUBB1-201ENST00000217133 TSGA10IPQ3SY00 556 aa11.25□□□□□ -0.61
TUBB1-201ENST00000217133 KLHDC4Q8TBB5 520 aa11.25□□□□□ -0.61
TUBB1-201ENST00000217133 FAM53CQ9NYF3 392 aa11.25□□□□□ -0.61
TUBB1-201ENST00000217133 SOS2Q07890 1332 aaPredicted RBP11.25□□□□□ -0.61
TUBB1-201ENST00000217133 FAM208AQ9UK61 1670 aaKnown RBP11.24□□□□□ -0.61
TUBB1-201ENST00000217133 HNRNPH2P55795 449 aaKnown RBP11.24□□□□□ -0.61
TUBB1-201ENST00000217133 LRRN4CLQ8ND94 238 aa11.24□□□□□ -0.61
TUBB1-201ENST00000217133 LLPHQ9BRT6 129 aaKnown RBP11.24□□□□□ -0.61
TUBB1-201ENST00000217133 MED23Q9ULK4 1368 aa11.24□□□□□ -0.61
TUBB1-201ENST00000217133 PIK3C2AO00443 1686 aa11.24□□□□□ -0.61
TUBB1-201ENST00000217133 DDX58O95786 925 aaKnown RBP11.24□□□□□ -0.61
TUBB1-201ENST00000217133 TUBB4AP04350 444 aa11.24□□□□□ -0.61
TUBB1-201ENST00000217133 CYP2C19P33261 490 aa11.24□□□□□ -0.61
TUBB1-201ENST00000217133 APOBRQ0VD83 1088 aa11.24□□□□□ -0.61
TUBB1-201ENST00000217133 ARHGEF25Q86VW2 580 aa11.24□□□□□ -0.61
TUBB1-201ENST00000217133 CERKQ8TCT0 537 aa11.24□□□□□ -0.61
TUBB1-201ENST00000217133 FHOD1Q9Y613 1164 aa11.24□□□□□ -0.61
TUBB1-201ENST00000217133 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.24□□□□□ -0.61
TUBB1-201ENST00000217133 AKAP12Q02952 1782 aa11.24□□□□□ -0.61
TUBB1-201ENST00000217133 ETF1P62495 437 aaKnown RBP11.23□□□□□ -0.61
TUBB1-201ENST00000217133 GPS2Q13227 327 aa11.23□□□□□ -0.61
TUBB1-201ENST00000217133 DPCR1Q3MIW9 517 aa11.23□□□□□ -0.61
TUBB1-201ENST00000217133 NBPF6Q5VWK0 638 aa11.23□□□□□ -0.61
TUBB1-201ENST00000217133 ATL3Q6DD88 541 aa11.23□□□□□ -0.61
TUBB1-201ENST00000217133 ARMCX5Q6P1M9 558 aa11.23□□□□□ -0.61
TUBB1-201ENST00000217133 FAM177A1Q8N128 213 aaPredicted RBP11.23□□□□□ -0.61
TUBB1-201ENST00000217133 KCNH5Q8NCM2 988 aa11.23□□□□□ -0.61
TUBB1-201ENST00000217133 NSUN7Q8NE18 718 aaKnown RBP11.23□□□□□ -0.61
TUBB1-201ENST00000217133 NBPF4Q96M43 638 aa11.23□□□□□ -0.61
TUBB1-201ENST00000217133 PRDM11Q9NQV5 511 aa11.23□□□□□ -0.61
TUBB1-201ENST00000217133 SNRKQ9NRH2 765 aa11.23□□□□□ -0.61
TUBB1-201ENST00000217133 ERBB3P21860 1342 aa11.23□□□□□ -0.61
TUBB1-201ENST00000217133 PFKFB2O60825 505 aa11.23□□□□□ -0.61
TUBB1-201ENST00000217133 SLC3A2P08195 630 aaKnown RBP11.23□□□□□ -0.61
TUBB1-201ENST00000217133 LMOD1P29536 600 aaPredicted RBP11.23□□□□□ -0.61
TUBB1-201ENST00000217133 ADD1P35611 737 aaKnown RBP11.23□□□□□ -0.61
TUBB1-201ENST00000217133 ZNF530Q6P9A1 599 aaPredicted RBP11.23□□□□□ -0.61
TUBB1-201ENST00000217133 MPRIPQ6WCQ1 1025 aa11.23□□□□□ -0.61
TUBB1-201ENST00000217133 NBPF11Q86T75 865 aa11.23□□□□□ -0.61
TUBB1-201ENST00000217133 LINS1Q8NG48 757 aa11.23□□□□□ -0.61
TUBB1-201ENST00000217133 STRN4Q9NRL3 753 aa11.23□□□□□ -0.61
TUBB1-201ENST00000217133 NDUFB9Q9Y6M9 179 aa11.23□□□□□ -0.61
TUBB1-201ENST00000217133 CYP21A2P08686 494 aa11.23□□□□□ -0.61
TUBB1-201ENST00000217133 RGPD1P0DJD0 1748 aa11.23□□□□□ -0.61
TUBB1-201ENST00000217133 CSB-PGBD3P0DP91 1061 aa11.23□□□□□ -0.61
TUBB1-201ENST00000217133 ENGASEQ8NFI3 743 aa11.23□□□□□ -0.61
TUBB1-201ENST00000217133 SEC62Q99442 399 aaKnown RBP11.23□□□□□ -0.61
TUBB1-201ENST00000217133 NCOA5Q9HCD5 579 aaKnown RBP11.23□□□□□ -0.61
TUBB1-201ENST00000217133 KCND1Q9NSA2 647 aa11.23□□□□□ -0.61
TUBB1-201ENST00000217133 PCDHA7Q9UN72 937 aa11.23□□□□□ -0.61
TUBB1-201ENST00000217133 PROSER3Q2NL68 480 aa11.22□□□□□ -0.61
TUBB1-201ENST00000217133 RIC3Q7Z5B4 369 aa11.22□□□□□ -0.61
TUBB1-201ENST00000217133 SMARCC2Q8TAQ2 1214 aa11.22□□□□□ -0.61
TUBB1-201ENST00000217133 KIAA1468Q9P260 1216 aa11.22□□□□□ -0.61
TUBB1-201ENST00000217133 HMGB1P09429 215 aaKnown RBP11.22□□□□□ -0.61
TUBB1-201ENST00000217133 PDE4CQ08493 712 aa11.22□□□□□ -0.61
TUBB1-201ENST00000217133 ISM2Q6H9L7 571 aa11.22□□□□□ -0.61
TUBB1-201ENST00000217133 DHX32Q7L7V1 743 aaKnown RBP11.22□□□□□ -0.61
TUBB1-201ENST00000217133 NEK11Q8NG66 645 aa11.22□□□□□ -0.61
TUBB1-201ENST00000217133 CARD6Q9BX69 1037 aa11.22□□□□□ -0.61
TUBB1-201ENST00000217133 TSPYL1Q9H0U9 437 aa11.22□□□□□ -0.61
TUBB1-201ENST00000217133 TAOK2Q9UL54 1235 aa11.22□□□□□ -0.61
TUBB1-201ENST00000217133 SERPINC1P01008 464 aa11.22□□□□□ -0.61
TUBB1-201ENST00000217133 PLA2G4AP47712 749 aa11.22□□□□□ -0.61
TUBB1-201ENST00000217133 USPL1Q5W0Q7 1092 aa11.22□□□□□ -0.61
TUBB1-201ENST00000217133 SRRTQ9BXP5 876 aaKnown RBP11.22□□□□□ -0.61
TUBB1-201ENST00000217133 NLRP2Q9NX02 1062 aa11.22□□□□□ -0.61
TUBB1-201ENST00000217133 ORC3Q9UBD5 711 aaPredicted RBP11.22□□□□□ -0.61
TUBB1-201ENST00000217133 POLR3DP05423 398 aaPredicted RBP11.21□□□□□ -0.61
TUBB1-201ENST00000217133 TPM1P09493 284 aa11.21□□□□□ -0.61
TUBB1-201ENST00000217133 TNNT3P45378 269 aaPredicted RBP11.21□□□□□ -0.61
TUBB1-201ENST00000217133 NDUFA8P51970 172 aa11.21□□□□□ -0.61
TUBB1-201ENST00000217133 NEXNQ0ZGT2 675 aa11.21□□□□□ -0.61
TUBB1-201ENST00000217133 MCMDC2Q4G0Z9 681 aa11.21□□□□□ -0.61
TUBB1-201ENST00000217133 TXLNBQ8N3L3 684 aa11.21□□□□□ -0.61
TUBB1-201ENST00000217133 ANKRD24Q8TF21 1146 aa11.21□□□□□ -0.61
TUBB1-201ENST00000217133 IP6K1Q92551 441 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms