RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 NBPF14Q5TI25 921 aa15.61■□□□□ 0.09
SRP54-201ENST00000216774 NBPF10Q6P3W6 841 aaKnown RBP15.61■□□□□ 0.09
SRP54-201ENST00000216774 CCDC73Q6ZRK6 1079 aa15.61■□□□□ 0.09
SRP54-201ENST00000216774 CCAR1Q8IX12 1150 aaKnown RBP15.61■□□□□ 0.09
SRP54-201ENST00000216774 NBPF15Q8N660 670 aa15.61■□□□□ 0.09
SRP54-201ENST00000216774 CLIP2Q9UDT6 1046 aa15.61■□□□□ 0.09
SRP54-201ENST00000216774 DCCP43146 1447 aa15.61■□□□□ 0.09
SRP54-201ENST00000216774 GOLGA6L19H0YKK7 550 aa15.6■□□□□ 0.09
SRP54-201ENST00000216774 EYA2O00167 538 aa15.6■□□□□ 0.09
SRP54-201ENST00000216774 RIOK3O14730 519 aaKnown RBP15.6■□□□□ 0.09
SRP54-201ENST00000216774 MRFAP1L1Q96HT8 127 aa15.6■□□□□ 0.09
SRP54-201ENST00000216774 MAST3O60307 1309 aa15.6■□□□□ 0.09
SRP54-201ENST00000216774 CTIFO43310 598 aaKnown RBP15.6■□□□□ 0.09
SRP54-201ENST00000216774 PDIA3P30101 505 aaKnown RBP15.6■□□□□ 0.09
SRP54-201ENST00000216774 EVCP57679 992 aa15.6■□□□□ 0.09
SRP54-201ENST00000216774 TIMM10P62072 90 aa15.6■□□□□ 0.09
SRP54-201ENST00000216774 FAM160A1Q05DH4 1040 aa15.6■□□□□ 0.09
SRP54-201ENST00000216774 SNW1Q13573 536 aaKnown RBP15.6■□□□□ 0.09
SRP54-201ENST00000216774 LRRFIP1Q32MZ4 808 aaKnown RBP15.6■□□□□ 0.09
SRP54-201ENST00000216774 CCDC191Q8NCU4 936 aa15.6■□□□□ 0.09
SRP54-201ENST00000216774 TSC1Q92574 1164 aa15.6■□□□□ 0.09
SRP54-201ENST00000216774 BCL2L12Q9HB09 334 aa15.6■□□□□ 0.09
SRP54-201ENST00000216774 CPDO75976 1380 aa15.6■□□□□ 0.09
SRP54-201ENST00000216774 KINO60870 393 aaKnown RBP15.59■□□□□ 0.09
SRP54-201ENST00000216774 IFIT1P09914 478 aaKnown RBP15.59■□□□□ 0.09
SRP54-201ENST00000216774 ATF3P18847 181 aa15.59■□□□□ 0.09
SRP54-201ENST00000216774 CEBPZQ03701 1054 aaKnown RBP15.59■□□□□ 0.09
SRP54-201ENST00000216774 ENGASEQ8NFI3 743 aa15.59■□□□□ 0.09
SRP54-201ENST00000216774 USP28Q96RU2 1077 aa15.59■□□□□ 0.09
SRP54-201ENST00000216774 NRBP1Q9UHY1 535 aa15.59■□□□□ 0.09
SRP54-201ENST00000216774 TNS3Q68CZ2 1445 aa15.59■□□□□ 0.09
SRP54-201ENST00000216774 NEMFO60524 1076 aa15.59■□□□□ 0.09
SRP54-201ENST00000216774 LRMPQ12912 555 aa15.59■□□□□ 0.09
SRP54-201ENST00000216774 GOLPH3LQ9H4A5 285 aa15.59■□□□□ 0.09
SRP54-201ENST00000216774 UBR2Q8IWV8 1755 aa15.58■□□□□ 0.09
SRP54-201ENST00000216774 SMAP1Q8IYB5 467 aaPredicted RBP15.58■□□□□ 0.08
SRP54-201ENST00000216774 CTNNA3Q9UI47 895 aa15.58■□□□□ 0.08
SRP54-201ENST00000216774 CCDC9Q9Y3X0 531 aaKnown RBP15.58■□□□□ 0.08
SRP54-201ENST00000216774 CARMIL3Q8ND23 1372 aa15.58■□□□□ 0.08
SRP54-201ENST00000216774 A0A1B0GUL7 405 aa15.57■□□□□ 0.08
SRP54-201ENST00000216774 CCT2P78371 535 aaKnown RBP15.57■□□□□ 0.08
SRP54-201ENST00000216774 TTLL7Q6ZT98 887 aa15.57■□□□□ 0.08
SRP54-201ENST00000216774 C11orf57Q6ZUT1 292 aaPredicted RBP15.57■□□□□ 0.08
SRP54-201ENST00000216774 ANO10Q9NW15 660 aa15.57■□□□□ 0.08
SRP54-201ENST00000216774 SLFNL1Q499Z3 407 aa15.57■□□□□ 0.08
SRP54-201ENST00000216774 ILDR1Q86SU0 546 aaPredicted RBP15.57■□□□□ 0.08
SRP54-201ENST00000216774 CACTINQ8WUQ7 758 aaKnown RBP15.57■□□□□ 0.08
SRP54-201ENST00000216774 ANKRD7Q92527 254 aa15.57■□□□□ 0.08
SRP54-201ENST00000216774 FTOQ9C0B1 505 aaKnown RBP eCLIP15.57■□□□□ 0.08
SRP54-201ENST00000216774 NCOA5Q9HCD5 579 aaKnown RBP15.57■□□□□ 0.08
SRP54-201ENST00000216774 FBXO3Q9UK99 471 aa15.57■□□□□ 0.08
SRP54-201ENST00000216774 PCDH11XQ9BZA7 1347 aa15.56■□□□□ 0.08
SRP54-201ENST00000216774 PCDH11YQ9BZA8 1340 aa15.56■□□□□ 0.08
SRP54-201ENST00000216774 SMTNL1A8MU46 457 aa15.56■□□□□ 0.08
SRP54-201ENST00000216774 ZFYP08048 801 aaPredicted RBP15.56■□□□□ 0.08
SRP54-201ENST00000216774 ME1P48163 572 aa15.56■□□□□ 0.08
SRP54-201ENST00000216774 CHRNA2Q15822 529 aa15.56■□□□□ 0.08
SRP54-201ENST00000216774 LRRC24Q50LG9 513 aa15.56■□□□□ 0.08
SRP54-201ENST00000216774 RTEL1Q9NZ71 1219 aa15.56■□□□□ 0.08
SRP54-201ENST00000216774 PAXBP1Q9Y5B6 917 aa15.56■□□□□ 0.08
SRP54-201ENST00000216774 A0A1W2PQ27 194 aa15.56■□□□□ 0.08
SRP54-201ENST00000216774 A0A1W2PQ64 194 aa15.56■□□□□ 0.08
SRP54-201ENST00000216774 A0A1W2PQD8 194 aa15.56■□□□□ 0.08
SRP54-201ENST00000216774 ERVV-2B6SEH9 535 aa15.56■□□□□ 0.08
SRP54-201ENST00000216774 M0R2C6 588 aa15.56■□□□□ 0.08
SRP54-201ENST00000216774 SYCP1Q15431 976 aa15.56■□□□□ 0.08
SRP54-201ENST00000216774 NAT10Q9H0A0 1025 aaKnown RBP15.56■□□□□ 0.08
SRP54-201ENST00000216774 KCPQ6ZWJ8 1503 aa15.56■□□□□ 0.08
SRP54-201ENST00000216774 BECN2A8MW95 431 aa15.55■□□□□ 0.08
SRP54-201ENST00000216774 CCDC144BQ3MJ40 725 aa15.55■□□□□ 0.08
SRP54-201ENST00000216774 CCDC144CPQ8IYA2 1237 aa15.55■□□□□ 0.08
SRP54-201ENST00000216774 CEP57L1Q8IYX8 460 aa15.55■□□□□ 0.08
SRP54-201ENST00000216774 FSIP1Q8NA03 581 aa15.55■□□□□ 0.08
SRP54-201ENST00000216774 CABLES1Q8TDN4 633 aa15.55■□□□□ 0.08
SRP54-201ENST00000216774 CEP126Q9P2H0 1117 aa15.55■□□□□ 0.08
SRP54-201ENST00000216774 PAPPAQ13219 1627 aa15.55■□□□□ 0.08
SRP54-201ENST00000216774 ABCC12Q96J65 1359 aa15.55■□□□□ 0.08
SRP54-201ENST00000216774 A0A0G2JLW4 131 aa15.55■□□□□ 0.08
SRP54-201ENST00000216774 DHX16O60231 1041 aaKnown RBP15.55■□□□□ 0.08
SRP54-201ENST00000216774 FOSBP53539 338 aa15.55■□□□□ 0.08
SRP54-201ENST00000216774 RBM6P78332 1123 aaKnown RBP15.55■□□□□ 0.08
SRP54-201ENST00000216774 ADALQ6DHV7 355 aa15.55■□□□□ 0.08
SRP54-201ENST00000216774 LRRC8AQ8IWT6 810 aa15.55■□□□□ 0.08
SRP54-201ENST00000216774 DHX40Q8IX18 779 aaKnown RBP15.55■□□□□ 0.08
SRP54-201ENST00000216774 MRPS27Q92552 414 aaKnown RBP15.55■□□□□ 0.08
SRP54-201ENST00000216774 C16orf45Q96MC5 204 aaPredicted RBP15.55■□□□□ 0.08
SRP54-201ENST00000216774 NAP1L2Q9ULW6 460 aaPredicted RBP15.55■□□□□ 0.08
SRP54-201ENST00000216774 AKAP2Q9Y2D5 859 aa15.55■□□□□ 0.08
SRP54-201ENST00000216774 FDPSP14324 419 aaKnown RBP15.54■□□□□ 0.08
SRP54-201ENST00000216774 IMMTQ16891 758 aaKnown RBP15.54■□□□□ 0.08
SRP54-201ENST00000216774 CCDC158Q5M9N0 1113 aa15.54■□□□□ 0.08
SRP54-201ENST00000216774 FMR1NBQ8N0W7 255 aaPredicted RBP15.54■□□□□ 0.08
SRP54-201ENST00000216774 RGS22Q8NE09 1264 aa15.54■□□□□ 0.08
SRP54-201ENST00000216774 DDX17Q92841 729 aaKnown RBP15.54■□□□□ 0.08
SRP54-201ENST00000216774 OSBP2Q969R2 916 aa15.54■□□□□ 0.08
SRP54-201ENST00000216774 ZNF594Q96JF6 807 aaPredicted RBP15.54■□□□□ 0.08
SRP54-201ENST00000216774 TNNT1P13805 278 aa15.54■□□□□ 0.08
SRP54-201ENST00000216774 PDCL2Q8N4E4 241 aa15.54■□□□□ 0.08
SRP54-201ENST00000216774 PCDHA7Q9UN72 937 aa15.54■□□□□ 0.08
SRP54-201ENST00000216774 SPATA31A3Q5VYP0 1347 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms