RNA–Protein interactions for RNA: ENST00000216727.8

PABPN1-201, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PABPN1, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-201ENST00000216727 DDX49Q9Y6V7 483 aaKnown RBP35.38■■■■□ 3.25
PABPN1-201ENST00000216727 M0R2C6 588 aa35.37■■■■□ 3.25
PABPN1-201ENST00000216727 UQCRFS1P1P0C7P4 283 aa35.37■■■■□ 3.25
PABPN1-201ENST00000216727 ST3GAL1Q11201 340 aa35.37■■■■□ 3.25
PABPN1-201ENST00000216727 TTF1Q15361 905 aaPredicted RBP35.37■■■■□ 3.25
PABPN1-201ENST00000216727 SEC31BQ9NQW1 1179 aa35.37■■■■□ 3.25
PABPN1-201ENST00000216727 HMGB1P09429 215 aaKnown RBP35.36■■■■□ 3.25
PABPN1-201ENST00000216727 CCDC102BQ68D86 513 aa35.36■■■■□ 3.25
PABPN1-201ENST00000216727 APPBP2Q92624 585 aa35.36■■■■□ 3.25
PABPN1-201ENST00000216727 FOXD4L5Q5VV16 416 aaPredicted RBP35.35■■■■□ 3.25
PABPN1-201ENST00000216727 PI16Q6UXB8 463 aa35.35■■■■□ 3.25
PABPN1-201ENST00000216727 FOXD4L4Q8WXT5 416 aaPredicted RBP35.35■■■■□ 3.25
PABPN1-201ENST00000216727 GJD4Q96KN9 370 aaPredicted RBP35.35■■■■□ 3.25
PABPN1-201ENST00000216727 DDX24Q9GZR7 859 aaKnown RBP eCLIP35.35■■■■□ 3.251e-11■■□□□ 13.8
PABPN1-201ENST00000216727 ISY1Q9ULR0 285 aaKnown RBP35.35■■■■□ 3.25
PABPN1-201ENST00000216727 MYH7P12883 1935 aa35.35■■■■□ 3.25
PABPN1-201ENST00000216727 SCN7AQ01118 1682 aa35.35■■■■□ 3.25
PABPN1-201ENST00000216727 CERKQ8TCT0 537 aa35.35■■■■□ 3.25
PABPN1-201ENST00000216727 GOLGA6L3A6NEY3 463 aa35.34■■■■□ 3.25
PABPN1-201ENST00000216727 IGHMBP2P38935 993 aaKnown RBP35.34■■■■□ 3.25
PABPN1-201ENST00000216727 ZSCAN25Q6NSZ9 544 aa35.34■■■■□ 3.25
PABPN1-201ENST00000216727 SLC5A1P13866 664 aa35.33■■■■□ 3.25
PABPN1-201ENST00000216727 SYT1P21579 422 aa35.33■■■■□ 3.25
PABPN1-201ENST00000216727 TCEANC2Q96MN5 208 aa35.33■■■■□ 3.25
PABPN1-201ENST00000216727 STX6O43752 255 aa35.33■■■■□ 3.25
PABPN1-201ENST00000216727 RPS6KA4O75676 772 aa35.33■■■■□ 3.25
PABPN1-201ENST00000216727 KCNQ4P56696 695 aa35.33■■■■□ 3.25
PABPN1-201ENST00000216727 WASHC4Q2M389 1173 aa35.33■■■■□ 3.25
PABPN1-201ENST00000216727 PRPF40AO75400 957 aaKnown RBP35.32■■■■□ 3.25
PABPN1-201ENST00000216727 GJB2P29033 226 aa35.32■■■■□ 3.25
PABPN1-201ENST00000216727 PHKA1P46020 1223 aa35.32■■■■□ 3.25
PABPN1-201ENST00000216727 MEX3CQ5U5Q3 659 aaKnown RBP35.32■■■■□ 3.24
PABPN1-201ENST00000216727 STOX1Q6ZVD7 989 aa35.32■■■■□ 3.24
PABPN1-201ENST00000216727 HELBQ8NG08 1087 aaPredicted RBP35.32■■■■□ 3.24
PABPN1-201ENST00000216727 ZSCAN22P10073 491 aaPredicted RBP35.31■■■■□ 3.24
PABPN1-201ENST00000216727 PDIA4P13667 645 aaKnown RBP35.31■■■■□ 3.24
PABPN1-201ENST00000216727 ONECUT3O60422 494 aaPredicted RBP35.3■■■■□ 3.24
PABPN1-201ENST00000216727 NECAB1Q8N987 351 aa35.3■■■■□ 3.24
PABPN1-201ENST00000216727 NARFQ9UHQ1 456 aa35.3■■■■□ 3.24
PABPN1-201ENST00000216727 CTNNA3Q9UI47 895 aa35.3■■■■□ 3.24
PABPN1-201ENST00000216727 SF3B3Q15393 1217 aaKnown RBP35.29■■■■□ 3.24
PABPN1-201ENST00000216727 ADD2P35612 726 aa35.28■■■■□ 3.24
PABPN1-201ENST00000216727 DHX32Q7L7V1 743 aaKnown RBP35.28■■■■□ 3.24
PABPN1-201ENST00000216727 CDC5LQ99459 802 aaKnown RBP35.28■■■■□ 3.24
PABPN1-201ENST00000216727 BCL2L12Q9HB09 334 aa35.28■■■■□ 3.24
PABPN1-201ENST00000216727 ATRNO75882 1429 aa35.28■■■■□ 3.24
PABPN1-201ENST00000216727 PUS7LQ9H0K6 701 aaKnown RBP35.28■■■■□ 3.24
PABPN1-201ENST00000216727 CCNL1Q9UK58 526 aaPredicted RBP35.28■■■■□ 3.24
PABPN1-201ENST00000216727 ERFEQ4G0M1 354 aa35.27■■■■□ 3.24
PABPN1-201ENST00000216727 CHAMP1Q96JM3 812 aa35.27■■■■□ 3.24
PABPN1-201ENST00000216727 UBE3CQ15386 1083 aa35.27■■■■□ 3.24
PABPN1-201ENST00000216727 SLC10A5Q5PT55 438 aa35.27■■■■□ 3.24
PABPN1-201ENST00000216727 AFF2P51816 1311 aa35.26■■■■□ 3.24
PABPN1-201ENST00000216727 FOXP2O15409 715 aa35.26■■■■□ 3.23
PABPN1-201ENST00000216727 Q6ZUG5 572 aa35.26■■■■□ 3.23
PABPN1-201ENST00000216727 PIH1D3Q9NQM4 214 aaKnown RBP35.26■■■■□ 3.23
PABPN1-201ENST00000216727 LAMA4Q16363 1823 aa35.26■■■■□ 3.23
PABPN1-201ENST00000216727 E7EWF7 191 aa35.25■■■■□ 3.23
PABPN1-201ENST00000216727 LY75O60449 1722 aa35.25■■■■□ 3.23
PABPN1-201ENST00000216727 SLC9C2Q5TAH2 1124 aa35.24■■■■□ 3.23
PABPN1-201ENST00000216727 TBC1D9BQ66K14 1250 aa35.24■■■■□ 3.23
PABPN1-201ENST00000216727 GPAA1O43292 621 aa35.23■■■■□ 3.23
PABPN1-201ENST00000216727 HSPA1LP34931 641 aa35.23■■■■□ 3.23
PABPN1-201ENST00000216727 EXOSC10Q01780 885 aaKnown RBP35.23■■■■□ 3.23
PABPN1-201ENST00000216727 FAM182BQ5T319 152 aa35.23■■■■□ 3.23
PABPN1-201ENST00000216727 SPATA5Q8NB90 893 aa35.23■■■■□ 3.23
PABPN1-201ENST00000216727 AGXT2Q9BYV1 514 aa35.23■■■■□ 3.23
PABPN1-201ENST00000216727 ATP6V1DQ9Y5K8 247 aa35.23■■■■□ 3.23
PABPN1-201ENST00000216727 GNPATO15228 680 aa35.23■■■■□ 3.23
PABPN1-201ENST00000216727 F13A1P00488 732 aa35.23■■■■□ 3.23
PABPN1-201ENST00000216727 NYXQ9GZU5 481 aa35.23■■■■□ 3.23
PABPN1-201ENST00000216727 SBF2Q86WG5 1849 aa35.23■■■■□ 3.23
PABPN1-201ENST00000216727 CHRNDQ07001 517 aa35.22■■■■□ 3.23
PABPN1-201ENST00000216727 GPT2Q8TD30 523 aa35.22■■■■□ 3.23
PABPN1-201ENST00000216727 TRPC5Q9UL62 973 aaPredicted RBP35.22■■■■□ 3.23
PABPN1-201ENST00000216727 MTMR6Q9Y217 621 aa35.22■■■■□ 3.23
PABPN1-201ENST00000216727 GTF3C6Q969F1 213 aa35.22■■■■□ 3.23
PABPN1-201ENST00000216727 RTCBQ9Y3I0 505 aaKnown RBP35.22■■■■□ 3.23
PABPN1-201ENST00000216727 MBD3O95983 291 aa35.21■■■■□ 3.23
PABPN1-201ENST00000216727 PDCP20941 246 aa35.21■■■■□ 3.23
PABPN1-201ENST00000216727 IMMTQ16891 758 aaKnown RBP35.21■■■■□ 3.23
PABPN1-201ENST00000216727 COL24A1Q17RW2 1714 aa35.21■■■■□ 3.23
PABPN1-201ENST00000216727 ZPR1O75312 459 aa35.2■■■■□ 3.23
PABPN1-201ENST00000216727 IDH1O75874 414 aaKnown RBP35.2■■■■□ 3.23
PABPN1-201ENST00000216727 FGAP02671 866 aa35.2■■■■□ 3.23
PABPN1-201ENST00000216727 TTLL5Q6EMB2 1281 aa35.2■■■■□ 3.23
PABPN1-201ENST00000216727 TAF1LQ8IZX4 1826 aa35.2■■■■□ 3.23
PABPN1-201ENST00000216727 A0A0G2JLW4 131 aa35.2■■■■□ 3.22
PABPN1-201ENST00000216727 MRE11P49959 708 aa35.2■■■■□ 3.22
PABPN1-201ENST00000216727 RASGRF1Q13972 1273 aa35.2■■■■□ 3.22
PABPN1-201ENST00000216727 ANKRD18AQ8IVF6 992 aa35.2■■■■□ 3.22
PABPN1-201ENST00000216727 PDE6AP16499 860 aa35.19■■■■□ 3.22
PABPN1-201ENST00000216727 C3orf67Q6ZVT6 689 aa35.19■■■■□ 3.22
PABPN1-201ENST00000216727 FBXL16Q8N461 479 aa35.19■■■■□ 3.22
PABPN1-201ENST00000216727 TMEM87AQ8NBN3 555 aa35.19■■■■□ 3.22
PABPN1-201ENST00000216727 SETDB2Q96T68 719 aa35.19■■■■□ 3.22
PABPN1-201ENST00000216727 SNAP23O00161 211 aa35.18■■■■□ 3.22
PABPN1-201ENST00000216727 BICDL1Q6ZP65 573 aa35.18■■■■□ 3.22
PABPN1-201ENST00000216727 BRF1Q92994 677 aa35.18■■■■□ 3.22
PABPN1-201ENST00000216727 BSDC1Q9NW68 430 aaPredicted RBP35.18■■■■□ 3.22
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms