RNA–Protein interactions for RNA: ENST00000216211.8

UPK3A-201, Transcript of uroplakin 3A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UPK3A, Length 1,051 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-201ENST00000216211 ITGA6P23229 1130 aa19.13■□□□□ 0.65
UPK3A-201ENST00000216211 HUNKP57058 714 aa19.13■□□□□ 0.65
UPK3A-201ENST00000216211 ZNF280AP59817 542 aaPredicted RBP19.13■□□□□ 0.65
UPK3A-201ENST00000216211 FAM161AQ3B820 660 aa19.13■□□□□ 0.65
UPK3A-201ENST00000216211 USP17L1Q7RTZ2 530 aa19.13■□□□□ 0.65
UPK3A-201ENST00000216211 TSKSQ9UJT2 592 aa19.13■□□□□ 0.65
UPK3A-201ENST00000216211 F6X3S4 739 aa19.12■□□□□ 0.65
UPK3A-201ENST00000216211 GMLQ99445 158 aa19.12■□□□□ 0.65
UPK3A-201ENST00000216211 GBA2Q9HCG7 927 aaPredicted RBP19.12■□□□□ 0.65
UPK3A-201ENST00000216211 CSF1RP07333 972 aa19.11■□□□□ 0.65
UPK3A-201ENST00000216211 USP17L8P0C7I0 530 aa19.11■□□□□ 0.65
UPK3A-201ENST00000216211 SCARF1Q14162 830 aa19.11■□□□□ 0.65
UPK3A-201ENST00000216211 ANGEL2Q5VTE6 544 aaKnown RBP19.11■□□□□ 0.65
UPK3A-201ENST00000216211 TXNRD3Q86VQ6 643 aa19.11■□□□□ 0.65
UPK3A-201ENST00000216211 SULF1Q8IWU6 871 aa19.11■□□□□ 0.65
UPK3A-201ENST00000216211 C2orf69Q8N8R5 385 aa19.11■□□□□ 0.65
UPK3A-201ENST00000216211 FBXW7Q969H0 707 aa19.11■□□□□ 0.65
UPK3A-201ENST00000216211 MYOZ2Q9NPC6 264 aa19.11■□□□□ 0.65
UPK3A-201ENST00000216211 CASP8AP2Q9UKL3 1982 aa19.11■□□□□ 0.65
UPK3A-201ENST00000216211 ZIC5Q96T25 663 aa19.1■□□□□ 0.65
UPK3A-201ENST00000216211 MPHOSPH8Q99549 860 aa19.1■□□□□ 0.65
UPK3A-201ENST00000216211 MXD3Q9BW11 206 aa19.1■□□□□ 0.65
UPK3A-201ENST00000216211 LEMD3Q9Y2U8 911 aa19.1■□□□□ 0.65
UPK3A-201ENST00000216211 ZNF804BA4D1E1 1349 aa19.09■□□□□ 0.65
UPK3A-201ENST00000216211 BRPF1P55201 1214 aaPredicted RBP19.09■□□□□ 0.65
UPK3A-201ENST00000216211 CDCA5Q96FF9 252 aa19.09■□□□□ 0.65
UPK3A-201ENST00000216211 AKAP11Q9UKA4 1901 aa19.09■□□□□ 0.65
UPK3A-201ENST00000216211 ANKRD18BA2A2Z9 1011 aa19.08■□□□□ 0.64
UPK3A-201ENST00000216211 KLRK1P26718 216 aa19.08■□□□□ 0.64
UPK3A-201ENST00000216211 NOGQ13253 232 aa19.08■□□□□ 0.64
UPK3A-201ENST00000216211 DACT2Q5SW24 774 aa19.08■□□□□ 0.64
UPK3A-201ENST00000216211 BEND3Q5T5X7 828 aa19.08■□□□□ 0.64
UPK3A-201ENST00000216211 RGMBQ6NW40 437 aa19.08■□□□□ 0.64
UPK3A-201ENST00000216211 ANKRD2Q9GZV1 360 aa19.08■□□□□ 0.64
UPK3A-201ENST00000216211 COA1Q9GZY4 146 aa19.08■□□□□ 0.64
UPK3A-201ENST00000216211 SCAF8Q9UPN6 1271 aaKnown RBP19.08■□□□□ 0.64
UPK3A-201ENST00000216211 FOXO4P98177 505 aa19.07■□□□□ 0.64
UPK3A-201ENST00000216211 CHRNDQ07001 517 aa19.07■□□□□ 0.64
UPK3A-201ENST00000216211 CHMP3Q9Y3E7 222 aa19.07■□□□□ 0.64
UPK3A-201ENST00000216211 FAM155AB1AL88 458 aaPredicted RBP19.06■□□□□ 0.64
UPK3A-201ENST00000216211 STRIP1Q5VSL9 837 aa19.06■□□□□ 0.64
UPK3A-201ENST00000216211 MIER1Q8N108 512 aa19.06■□□□□ 0.64
UPK3A-201ENST00000216211 PAPPA2Q9BXP8 1791 aa19.06■□□□□ 0.64
UPK3A-201ENST00000216211 PITPNM2Q9BZ72 1349 aa19.05■□□□□ 0.64
UPK3A-201ENST00000216211 SNAP23O00161 211 aa19.05■□□□□ 0.64
UPK3A-201ENST00000216211 CA12O43570 354 aa19.05■□□□□ 0.64
UPK3A-201ENST00000216211 KCNJ4P48050 445 aa19.05■□□□□ 0.64
UPK3A-201ENST00000216211 ZNF157P51786 506 aaPredicted RBP19.05■□□□□ 0.64
UPK3A-201ENST00000216211 NBPF9Q3BBW0 867 aa19.05■□□□□ 0.64
UPK3A-201ENST00000216211 MYO3BQ8WXR4 1341 aa19.04■□□□□ 0.64
UPK3A-201ENST00000216211 TAF5LO75529 589 aa19.04■□□□□ 0.64
UPK3A-201ENST00000216211 IFIT5Q13325 482 aaKnown RBP19.04■□□□□ 0.64
UPK3A-201ENST00000216211 EPHA10Q5JZY3 1008 aa19.04■□□□□ 0.64
UPK3A-201ENST00000216211 TTLL5Q6EMB2 1281 aa19.04■□□□□ 0.64
UPK3A-201ENST00000216211 HELBQ8NG08 1087 aaPredicted RBP19.04■□□□□ 0.64
UPK3A-201ENST00000216211 ABHD8Q96I13 439 aa19.04■□□□□ 0.64
UPK3A-201ENST00000216211 ECM29Q5VYK3 1845 aa19.04■□□□□ 0.64
UPK3A-201ENST00000216211 GTF2IP78347 998 aa19.03■□□□□ 0.64
UPK3A-201ENST00000216211 LMBR1LQ6UX01 489 aa19.03■□□□□ 0.64
UPK3A-201ENST00000216211 OGFOD1Q8N543 542 aa19.03■□□□□ 0.64
UPK3A-201ENST00000216211 CCDC102AQ96A19 550 aa19.03■□□□□ 0.64
UPK3A-201ENST00000216211 GRM8O00222 908 aa19.02■□□□□ 0.64
UPK3A-201ENST00000216211 WNT10BO00744 389 aa19.02■□□□□ 0.64
UPK3A-201ENST00000216211 KIF23Q02241 960 aaPredicted RBP19.02■□□□□ 0.64
UPK3A-201ENST00000216211 PRAMEF18Q5VWM3 479 aa19.02■□□□□ 0.64
UPK3A-201ENST00000216211 SLC4A10Q6U841 1118 aa19.02■□□□□ 0.64
UPK3A-201ENST00000216211 ZNF594Q96JF6 807 aaPredicted RBP19.02■□□□□ 0.64
UPK3A-201ENST00000216211 CD209Q9NNX6 404 aa19.02■□□□□ 0.64
UPK3A-201ENST00000216211 ZNF521Q96K83 1311 aa19.01■□□□□ 0.63
UPK3A-201ENST00000216211 IRS2Q9Y4H2 1338 aa19.01■□□□□ 0.63
UPK3A-201ENST00000216211 SASH1O94885 1247 aa19.01■□□□□ 0.63
UPK3A-201ENST00000216211 SLC10A3P09131 477 aa19.01■□□□□ 0.63
UPK3A-201ENST00000216211 KIAA0825Q8IV33 1275 aa19.01■□□□□ 0.63
UPK3A-201ENST00000216211 C9orf78Q9NZ63 289 aaPredicted RBP19.01■□□□□ 0.63
UPK3A-201ENST00000216211 CCDC57Q2TAC2 916 aa19■□□□□ 0.63
UPK3A-201ENST00000216211 MOB2Q70IA6 237 aa19■□□□□ 0.63
UPK3A-201ENST00000216211 SRCIN1Q9C0H9 1055 aa19■□□□□ 0.63
UPK3A-201ENST00000216211 PLIN1O60240 522 aa18.99■□□□□ 0.63
UPK3A-201ENST00000216211 ALDH1L1O75891 902 aa18.99■□□□□ 0.63
UPK3A-201ENST00000216211 FKBP1BP68106 108 aa18.99■□□□□ 0.63
UPK3A-201ENST00000216211 TAF7LQ5H9L4 462 aa18.99■□□□□ 0.63
UPK3A-201ENST00000216211 LDHAL6AQ6ZMR3 332 aa18.99■□□□□ 0.63
UPK3A-201ENST00000216211 RASAL3Q86YV0 1011 aa18.99■□□□□ 0.63
UPK3A-201ENST00000216211 HDAC9Q9UKV0 1011 aa18.99■□□□□ 0.63
UPK3A-201ENST00000216211 MMP14P50281 582 aa18.98■□□□□ 0.63
UPK3A-201ENST00000216211 C15orf52Q6ZUT6 534 aaKnown RBP18.98■□□□□ 0.63
UPK3A-201ENST00000216211 CNNM1Q9NRU3 951 aa18.98■□□□□ 0.63
UPK3A-201ENST00000216211 ZNF804AQ7Z570 1209 aa18.97■□□□□ 0.63
UPK3A-201ENST00000216211 CERS5Q8N5B7 392 aa18.97■□□□□ 0.63
UPK3A-201ENST00000216211 SUCLG2Q96I99 432 aa18.97■□□□□ 0.63
UPK3A-201ENST00000216211 UBE2Q2LH0YL09 131 aa18.96■□□□□ 0.63
UPK3A-201ENST00000216211 TRPA1O75762 1119 aa18.96■□□□□ 0.63
UPK3A-201ENST00000216211 TTLL12Q14166 644 aaPredicted RBP18.96■□□□□ 0.63
UPK3A-201ENST00000216211 MRPL50Q8N5N7 158 aaKnown RBP18.96■□□□□ 0.63
UPK3A-201ENST00000216211 ZBED3Q96IU2 234 aaPredicted RBP18.96■□□□□ 0.63
UPK3A-201ENST00000216211 CSRNP1Q96S65 589 aa18.96■□□□□ 0.63
UPK3A-201ENST00000216211 MCOLN1Q9GZU1 580 aa18.96■□□□□ 0.63
UPK3A-201ENST00000216211 RNF186Q9NXI6 227 aa18.96■□□□□ 0.63
UPK3A-201ENST00000216211 SAGE1Q9NXZ1 904 aa18.96■□□□□ 0.63
UPK3A-201ENST00000216211 ARAP2Q8WZ64 1704 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms