RNA–Protein interactions for RNA: ENST00000215743.7

MMP11-201, Transcript of matrix metallopeptidase 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MMP11, Length 2,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11-201ENST00000215743 SCRN1Q12765 414 aa23.46■■□□□ 1.35
MMP11-201ENST00000215743 CSPP1Q1MSJ5 1256 aa23.46■■□□□ 1.35
MMP11-201ENST00000215743 NAP1L2Q9ULW6 460 aaPredicted RBP23.46■■□□□ 1.35
MMP11-201ENST00000215743 DDB1Q16531 1140 aa23.45■■□□□ 1.35
MMP11-201ENST00000215743 NUP98P52948 1817 aa23.45■■□□□ 1.35
MMP11-201ENST00000215743 NUTM2BA6NNL0 878 aaPredicted RBP23.45■■□□□ 1.34
MMP11-201ENST00000215743 NUTM2EB1AL46 878 aaPredicted RBP23.45■■□□□ 1.34
MMP11-201ENST00000215743 HMGB1P09429 215 aaKnown RBP23.45■■□□□ 1.34
MMP11-201ENST00000215743 NUTM2AQ8IVF1 878 aaPredicted RBP23.45■■□□□ 1.34
MMP11-201ENST00000215743 MCAMP43121 646 aa23.44■■□□□ 1.34
MMP11-201ENST00000215743 HAND2P61296 217 aa23.44■■□□□ 1.34
MMP11-201ENST00000215743 PDE8AO60658 829 aa23.44■■□□□ 1.34
MMP11-201ENST00000215743 FOSBP53539 338 aa23.44■■□□□ 1.34
MMP11-201ENST00000215743 KRT85P78386 507 aa23.44■■□□□ 1.34
MMP11-201ENST00000215743 TTC6Q86TZ1 520 aa23.44■■□□□ 1.34
MMP11-201ENST00000215743 SPATA31A1Q5TZJ5 1347 aa23.43■■□□□ 1.34
MMP11-201ENST00000215743 CLCN1P35523 988 aa23.43■■□□□ 1.34
MMP11-201ENST00000215743 PUS7LQ9H0K6 701 aaKnown RBP23.43■■□□□ 1.34
MMP11-201ENST00000215743 ERVV-1B6SEH8 477 aa23.43■■□□□ 1.34
MMP11-201ENST00000215743 PPFIA3O75145 1194 aa23.43■■□□□ 1.34
MMP11-201ENST00000215743 ATP6V1AP38606 617 aa23.43■■□□□ 1.34
MMP11-201ENST00000215743 CCT2P78371 535 aaKnown RBP23.43■■□□□ 1.34
MMP11-201ENST00000215743 LRRFIP1Q32MZ4 808 aaKnown RBP23.43■■□□□ 1.34
MMP11-201ENST00000215743 SLIT2O94813 1529 aa23.42■■□□□ 1.34
MMP11-201ENST00000215743 MYH3P11055 1940 aa23.42■■□□□ 1.34
MMP11-201ENST00000215743 FOXP2O15409 715 aa23.42■■□□□ 1.34
MMP11-201ENST00000215743 TICAM2Q86XR7 235 aa23.42■■□□□ 1.34
MMP11-201ENST00000215743 HELBQ8NG08 1087 aaPredicted RBP23.42■■□□□ 1.34
MMP11-201ENST00000215743 TFIP11Q9UBB9 837 aaKnown RBP23.42■■□□□ 1.34
MMP11-201ENST00000215743 HCLS1P14317 486 aaPredicted RBP23.42■■□□□ 1.34
MMP11-201ENST00000215743 EXOSC10Q01780 885 aaKnown RBP23.42■■□□□ 1.34
MMP11-201ENST00000215743 ZNF34Q8IZ26 560 aa23.42■■□□□ 1.34
MMP11-201ENST00000215743 ZFYP08048 801 aaPredicted RBP23.41■■□□□ 1.34
MMP11-201ENST00000215743 VGLL2Q8N8G2 317 aa23.41■■□□□ 1.34
MMP11-201ENST00000215743 FAM184AQ8NB25 1140 aa23.41■■□□□ 1.34
MMP11-201ENST00000215743 APPBP2Q92624 585 aa23.41■■□□□ 1.34
MMP11-201ENST00000215743 PFKFB2O60825 505 aa23.4■■□□□ 1.34
MMP11-201ENST00000215743 CRKLP46109 303 aaKnown RBP23.4■■□□□ 1.34
MMP11-201ENST00000215743 INTS5Q6P9B9 1019 aaKnown RBP23.4■■□□□ 1.34
MMP11-201ENST00000215743 NCOA5Q9HCD5 579 aaKnown RBP23.4■■□□□ 1.34
MMP11-201ENST00000215743 H3BQV1 296 aa23.4■■□□□ 1.34
MMP11-201ENST00000215743 PDIA4P13667 645 aaKnown RBP23.4■■□□□ 1.34
MMP11-201ENST00000215743 IFFO2Q5TF58 517 aa23.4■■□□□ 1.34
MMP11-201ENST00000215743 SUSD4Q5VX71 490 aa23.4■■□□□ 1.34
MMP11-201ENST00000215743 GIMAP6Q6P9H5 292 aa23.4■■□□□ 1.34
MMP11-201ENST00000215743 MARCH10Q8NA82 808 aaPredicted RBP23.4■■□□□ 1.34
MMP11-201ENST00000215743 PDLIM2Q96JY6 352 aa23.4■■□□□ 1.34
MMP11-201ENST00000215743 CCDC87Q9NVE4 849 aa23.4■■□□□ 1.34
MMP11-201ENST00000215743 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.4■■□□□ 1.34
MMP11-201ENST00000215743 PDE8BO95263 885 aa23.39■■□□□ 1.34
MMP11-201ENST00000215743 EIF5P55010 431 aaKnown RBP23.39■■□□□ 1.34
MMP11-201ENST00000215743 NSUN7Q8NE18 718 aaKnown RBP23.39■■□□□ 1.33
MMP11-201ENST00000215743 GPHNQ9NQX3 736 aaPredicted RBP23.39■■□□□ 1.33
MMP11-201ENST00000215743 GPAA1O43292 621 aa23.38■■□□□ 1.33
MMP11-201ENST00000215743 FGAP02671 866 aa23.38■■□□□ 1.33
MMP11-201ENST00000215743 PHKA1P46020 1223 aa23.38■■□□□ 1.33
MMP11-201ENST00000215743 CDCA7Q9BWT1 371 aaPredicted RBP23.38■■□□□ 1.33
MMP11-201ENST00000215743 NWD2Q9ULI1 1742 aa23.38■■□□□ 1.33
MMP11-201ENST00000215743 PTPDC1A2A3K4 754 aa23.38■■□□□ 1.33
MMP11-201ENST00000215743 CTDNEP1O95476 244 aa23.38■■□□□ 1.33
MMP11-201ENST00000215743 IMMTQ16891 758 aaKnown RBP23.38■■□□□ 1.33
MMP11-201ENST00000215743 NRAPQ86VF7 1730 aa23.37■■□□□ 1.33
MMP11-201ENST00000215743 LOC102724428A0A0B4J2F2 783 aa23.37■■□□□ 1.33
MMP11-201ENST00000215743 IDH1O75874 414 aaKnown RBP23.37■■□□□ 1.33
MMP11-201ENST00000215743 SIK1P57059 783 aa23.37■■□□□ 1.33
MMP11-201ENST00000215743 ITPK1Q13572 414 aa23.37■■□□□ 1.33
MMP11-201ENST00000215743 CCDC102BQ68D86 513 aa23.37■■□□□ 1.33
MMP11-201ENST00000215743 SPATA32Q96LK8 384 aa23.37■■□□□ 1.33
MMP11-201ENST00000215743 PIH1D3Q9NQM4 214 aaKnown RBP23.37■■□□□ 1.33
MMP11-201ENST00000215743 ABCC12Q96J65 1359 aa23.36■■□□□ 1.33
MMP11-201ENST00000215743 SNAP23O00161 211 aa23.36■■□□□ 1.33
MMP11-201ENST00000215743 SLC9C2Q5TAH2 1124 aa23.36■■□□□ 1.33
MMP11-201ENST00000215743 SMARCC2Q8TAQ2 1214 aa23.36■■□□□ 1.33
MMP11-201ENST00000215743 AGXT2Q9BYV1 514 aa23.36■■□□□ 1.33
MMP11-201ENST00000215743 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.36■■□□□ 1.33
MMP11-201ENST00000215743 CTNNA3Q9UI47 895 aa23.36■■□□□ 1.33
MMP11-201ENST00000215743 PHLPP1O60346 1717 aa23.36■■□□□ 1.33
MMP11-201ENST00000215743 LETM1O95202 739 aaPredicted RBP23.36■■□□□ 1.33
MMP11-201ENST00000215743 RESTQ13127 1097 aa23.36■■□□□ 1.33
MMP11-201ENST00000215743 SEC31BQ9NQW1 1179 aa23.35■■□□□ 1.33
MMP11-201ENST00000215743 THRAP3Q9Y2W1 955 aaKnown RBP23.35■■□□□ 1.33
MMP11-201ENST00000215743 AKAP11Q9UKA4 1901 aa23.35■■□□□ 1.33
MMP11-201ENST00000215743 LIG1P18858 919 aa23.35■■□□□ 1.33
MMP11-201ENST00000215743 PDIA3P30101 505 aaKnown RBP23.35■■□□□ 1.33
MMP11-201ENST00000215743 ADD2P35612 726 aa23.35■■□□□ 1.33
MMP11-201ENST00000215743 ZSCAN30Q86W11 494 aa23.35■■□□□ 1.33
MMP11-201ENST00000215743 MYH7P12883 1935 aa23.34■■□□□ 1.33
MMP11-201ENST00000215743 LEO1Q8WVC0 666 aaPredicted RBP23.34■■□□□ 1.33
MMP11-201ENST00000215743 LLPHQ9BRT6 129 aaKnown RBP23.34■■□□□ 1.33
MMP11-201ENST00000215743 PIP4K2BP78356 416 aa23.34■■□□□ 1.33
MMP11-201ENST00000215743 PUM3Q15397 648 aaKnown RBP23.34■■□□□ 1.33
MMP11-201ENST00000215743 AEBP2Q6ZN18 517 aaPredicted RBP23.34■■□□□ 1.33
MMP11-201ENST00000215743 UTP14AQ9BVJ6 771 aaKnown RBP23.34■■□□□ 1.33
MMP11-201ENST00000215743 SCAND2PQ9GZW5 306 aaPredicted RBP23.34■■□□□ 1.33
MMP11-201ENST00000215743 ELP1O95163 1332 aa23.34■■□□□ 1.33
MMP11-201ENST00000215743 CAMTA2O94983 1202 aa23.33■■□□□ 1.33
MMP11-201ENST00000215743 GOLGA6L4A6NEF3 574 aa23.33■■□□□ 1.32
MMP11-201ENST00000215743 KCNQ2O43526 872 aa23.33■■□□□ 1.32
MMP11-201ENST00000215743 RAB11FIP4Q86YS3 637 aa23.33■■□□□ 1.32
MMP11-201ENST00000215743 SPATA31A5Q5VU36 1347 aa23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms