RNA–Protein interactions for RNA: ENST00000191018.9

CTSA-201, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-201ENST00000191018 BICDL1Q6ZP65 573 aa22.27■■□□□ 1.16
CTSA-201ENST00000191018 C3orf67Q6ZVT6 689 aa22.27■■□□□ 1.16
CTSA-201ENST00000191018 SETDB2Q96T68 719 aa22.27■■□□□ 1.16
CTSA-201ENST00000191018 CDC5LQ99459 802 aaKnown RBP22.27■■□□□ 1.16
CTSA-201ENST00000191018 CYP46A1Q9Y6A2 500 aa22.27■■□□□ 1.16
CTSA-201ENST00000191018 TAF1P21675 1872 aa22.27■■□□□ 1.16
CTSA-201ENST00000191018 MAST3O60307 1309 aa22.27■■□□□ 1.16
CTSA-201ENST00000191018 CPA1P15085 419 aa22.26■■□□□ 1.15
CTSA-201ENST00000191018 PI16Q6UXB8 463 aa22.26■■□□□ 1.15
CTSA-201ENST00000191018 CLEC17AQ6ZS10 378 aa22.26■■□□□ 1.15
CTSA-201ENST00000191018 NOL8Q76FK4 1167 aaKnown RBP22.26■■□□□ 1.15
CTSA-201ENST00000191018 KRT27Q7Z3Y8 459 aa22.26■■□□□ 1.15
CTSA-201ENST00000191018 DSCC1Q9BVC3 393 aa22.26■■□□□ 1.15
CTSA-201ENST00000191018 MYO5AQ9Y4I1 1855 aaKnown RBP22.26■■□□□ 1.15
CTSA-201ENST00000191018 UQCRFS1P1P0C7P4 283 aa22.26■■□□□ 1.15
CTSA-201ENST00000191018 PSMA5P28066 241 aa22.26■■□□□ 1.15
CTSA-201ENST00000191018 PHKA1P46020 1223 aa22.26■■□□□ 1.15
CTSA-201ENST00000191018 LIMCH1Q9UPQ0 1083 aa22.26■■□□□ 1.15
CTSA-201ENST00000191018 SLC5A1P13866 664 aa22.25■■□□□ 1.15
CTSA-201ENST00000191018 PDRG1Q9NUG6 133 aa22.25■■□□□ 1.15
CTSA-201ENST00000191018 TAF6LQ9Y6J9 622 aa22.25■■□□□ 1.15
CTSA-201ENST00000191018 TRAPPC3LQ5T215 181 aa22.24■■□□□ 1.15
CTSA-201ENST00000191018 OSBP2Q969R2 916 aa22.24■■□□□ 1.15
CTSA-201ENST00000191018 DOCK2Q92608 1830 aa22.24■■□□□ 1.15
CTSA-201ENST00000191018 ADRA2BP18089 450 aa22.23■■□□□ 1.15
CTSA-201ENST00000191018 GTF2E1P29083 439 aaPredicted RBP22.23■■□□□ 1.15
CTSA-201ENST00000191018 CHRNDQ07001 517 aa22.23■■□□□ 1.15
CTSA-201ENST00000191018 KRT32Q14532 448 aa22.23■■□□□ 1.15
CTSA-201ENST00000191018 TTF1Q15361 905 aaPredicted RBP22.23■■□□□ 1.15
CTSA-201ENST00000191018 GBP4Q96PP9 640 aa22.23■■□□□ 1.15
CTSA-201ENST00000191018 ALDH8A1Q9H2A2 487 aaPredicted RBP22.23■■□□□ 1.15
CTSA-201ENST00000191018 M0R2C6 588 aa22.22■■□□□ 1.15
CTSA-201ENST00000191018 RFC4P35249 363 aa22.22■■□□□ 1.15
CTSA-201ENST00000191018 PKP1Q13835 747 aa22.22■■□□□ 1.15
CTSA-201ENST00000191018 SLC27A3Q5K4L6 730 aa22.22■■□□□ 1.15
CTSA-201ENST00000191018 NBPF5PQ86XG9 351 aaPredicted RBP22.22■■□□□ 1.15
CTSA-201ENST00000191018 ANKRD18AQ8IVF6 992 aa22.22■■□□□ 1.15
CTSA-201ENST00000191018 LAMA4Q16363 1823 aa22.22■■□□□ 1.15
CTSA-201ENST00000191018 DDX11L8A8MPP1 907 aa22.22■■□□□ 1.15
CTSA-201ENST00000191018 SNAP23O00161 211 aa22.22■■□□□ 1.15
CTSA-201ENST00000191018 CYP21A2P08686 494 aa22.22■■□□□ 1.15
CTSA-201ENST00000191018 HSPD1P10809 573 aaKnown RBP22.22■■□□□ 1.15
CTSA-201ENST00000191018 COL9A3Q14050 684 aaPredicted RBP22.22■■□□□ 1.15
CTSA-201ENST00000191018 TPTE2Q6XPS3 522 aa22.22■■□□□ 1.15
CTSA-201ENST00000191018 APPBP2Q92624 585 aa22.22■■□□□ 1.15
CTSA-201ENST00000191018 BSDC1Q9NW68 430 aaPredicted RBP22.22■■□□□ 1.15
CTSA-201ENST00000191018 RPS6KB1P23443 525 aa22.21■■□□□ 1.15
CTSA-201ENST00000191018 BLOC1S2Q6QNY1 142 aa22.21■■□□□ 1.15
CTSA-201ENST00000191018 EP400Q96L91 3159 aa22.21■■□□□ 1.15
CTSA-201ENST00000191018 ZSCAN31Q96LW9 406 aaPredicted RBP22.2■■□□□ 1.14
CTSA-201ENST00000191018 NLRP3Q96P20 1036 aa22.2■■□□□ 1.14
CTSA-201ENST00000191018 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.2■■□□□ 1.143e-6■■□□□ 12.8
CTSA-201ENST00000191018 ZDHHC9Q9Y397 364 aa22.2■■□□□ 1.14
CTSA-201ENST00000191018 PHF14O94880 888 aa22.2■■□□□ 1.14
CTSA-201ENST00000191018 ADD2P35612 726 aa22.2■■□□□ 1.14
CTSA-201ENST00000191018 ZSCAN25Q6NSZ9 544 aa22.2■■□□□ 1.14
CTSA-201ENST00000191018 TNRC6CQ9HCJ0 1690 aaKnown RBP22.2■■□□□ 1.14
CTSA-201ENST00000191018 PIH1D3Q9NQM4 214 aaKnown RBP22.2■■□□□ 1.14
CTSA-201ENST00000191018 CARMIL3Q8ND23 1372 aa22.18■■□□□ 1.14
CTSA-201ENST00000191018 TRIM37O94972 964 aa22.18■■□□□ 1.14
CTSA-201ENST00000191018 WASHC4Q2M389 1173 aa22.18■■□□□ 1.14
CTSA-201ENST00000191018 SH2B1Q9NRF2 756 aaPredicted RBP22.18■■□□□ 1.14
CTSA-201ENST00000191018 FOXP2O15409 715 aa22.17■■□□□ 1.14
CTSA-201ENST00000191018 LARGE1O95461 756 aa22.17■■□□□ 1.14
CTSA-201ENST00000191018 RBM6P78332 1123 aaKnown RBP22.17■■□□□ 1.14
CTSA-201ENST00000191018 RASGRF1Q13972 1273 aa22.17■■□□□ 1.14
CTSA-201ENST00000191018 SPATA5Q8NB90 893 aa22.17■■□□□ 1.14
CTSA-201ENST00000191018 CELF1Q92879 486 aaKnown RBP22.17■■□□□ 1.14
CTSA-201ENST00000191018 NEK1Q96PY6 1258 aa22.17■■□□□ 1.14
CTSA-201ENST00000191018 LARP6Q9BRS8 491 aaKnown RBP22.17■■□□□ 1.14
CTSA-201ENST00000191018 PUS7LQ9H0K6 701 aaKnown RBP22.17■■□□□ 1.14
CTSA-201ENST00000191018 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.17■■□□□ 1.14
CTSA-201ENST00000191018 UBE3CQ15386 1083 aa22.17■■□□□ 1.14
CTSA-201ENST00000191018 ZNF772Q68DY9 489 aaPredicted RBP22.17■■□□□ 1.14
CTSA-201ENST00000191018 BAG4O95429 457 aaKnown RBP22.16■■□□□ 1.14
CTSA-201ENST00000191018 DEKP35659 375 aaKnown RBP22.16■■□□□ 1.14
CTSA-201ENST00000191018 UBE4AQ14139 1066 aa22.16■■□□□ 1.14
CTSA-201ENST00000191018 NFIXQ14938 502 aa22.16■■□□□ 1.14
CTSA-201ENST00000191018 ANKRD1Q15327 319 aa22.16■■□□□ 1.14
CTSA-201ENST00000191018 MINPP1Q9UNW1 487 aa22.16■■□□□ 1.14
CTSA-201ENST00000191018 ZNF804BA4D1E1 1349 aa22.16■■□□□ 1.14
CTSA-201ENST00000191018 BCAMP50895 628 aa22.15■■□□□ 1.14
CTSA-201ENST00000191018 STOX1Q6ZVD7 989 aa22.15■■□□□ 1.14
CTSA-201ENST00000191018 BRD1O95696 1058 aa22.15■■□□□ 1.14
CTSA-201ENST00000191018 TM4SF1P30408 202 aa22.15■■□□□ 1.14
CTSA-201ENST00000191018 TOB2Q14106 344 aaPredicted RBP22.15■■□□□ 1.14
CTSA-201ENST00000191018 GSE1Q14687 1217 aa22.15■■□□□ 1.14
CTSA-201ENST00000191018 ME3Q16798 604 aa22.15■■□□□ 1.14
CTSA-201ENST00000191018 SLC9C2Q5TAH2 1124 aa22.15■■□□□ 1.14
CTSA-201ENST00000191018 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.15■■□□□ 1.14
CTSA-201ENST00000191018 TCRBV5S4A2TA0A5A2 114 aa22.14■■□□□ 1.13
CTSA-201ENST00000191018 RPS8P62241 208 aaKnown RBP22.14■■□□□ 1.13
CTSA-201ENST00000191018 TPCN1Q9ULQ1 816 aa22.14■■□□□ 1.13
CTSA-201ENST00000191018 GPAA1O43292 621 aa22.13■■□□□ 1.13
CTSA-201ENST00000191018 IDH1O75874 414 aaKnown RBP22.13■■□□□ 1.13
CTSA-201ENST00000191018 ST3GAL1Q11201 340 aa22.13■■□□□ 1.13
CTSA-201ENST00000191018 HMGB1P09429 215 aaKnown RBP22.13■■□□□ 1.13
CTSA-201ENST00000191018 PDE6AP16499 860 aa22.13■■□□□ 1.13
CTSA-201ENST00000191018 PTMSP20962 102 aa22.13■■□□□ 1.13
CTSA-201ENST00000191018 PROM2Q8N271 834 aa22.13■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms