RNA–Protein interactions for RNA: ENST00000172853.14

NEB-201, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEB, Length 20,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-201ENST00000172853 RBM17Q96I25 401 aaKnown RBP3.89□□□□□ -1.79
NEB-201ENST00000172853 TRIM56Q9BRZ2 755 aaKnown RBP3.89□□□□□ -1.79
NEB-201ENST00000172853 CARD10Q9BWT7 1032 aa3.89□□□□□ -1.79
NEB-201ENST00000172853 AZI2Q9H6S1 392 aa3.89□□□□□ -1.79
NEB-201ENST00000172853 ARHGEF37A1IGU5 675 aa3.89□□□□□ -1.79
NEB-201ENST00000172853 RNF8O76064 485 aa3.89□□□□□ -1.79
NEB-201ENST00000172853 STK3Q13188 491 aa3.89□□□□□ -1.79
NEB-201ENST00000172853 PPP2R5DQ14738 602 aa3.89□□□□□ -1.79
NEB-201ENST00000172853 CCDC65Q8IXS2 484 aa3.89□□□□□ -1.79
NEB-201ENST00000172853 SMCR8Q8TEV9 937 aaPredicted RBP3.89□□□□□ -1.79
NEB-201ENST00000172853 TSPY26PQ9H489 355 aa3.89□□□□□ -1.79
NEB-201ENST00000172853 SPINK5Q9NQ38 1064 aaPredicted RBP3.89□□□□□ -1.79
NEB-201ENST00000172853 ABT1Q9ULW3 272 aaKnown RBP3.89□□□□□ -1.79
NEB-201ENST00000172853 STRN3Q13033 797 aa3.89□□□□□ -1.79
NEB-201ENST00000172853 PDCD2Q16342 344 aaPredicted RBP3.89□□□□□ -1.79
NEB-201ENST00000172853 ADALQ6DHV7 355 aa3.89□□□□□ -1.79
NEB-201ENST00000172853 C4orf50Q6ZRC1 276 aa3.89□□□□□ -1.79
NEB-201ENST00000172853 DACT3Q96B18 629 aaPredicted RBP3.89□□□□□ -1.79
NEB-201ENST00000172853 CWC25Q9NXE8 425 aaPredicted RBP3.89□□□□□ -1.79
NEB-201ENST00000172853 WDR44Q5JSH3 913 aa3.89□□□□□ -1.79
NEB-201ENST00000172853 FNBP1Q96RU3 617 aa3.89□□□□□ -1.79
NEB-201ENST00000172853 FAM107BQ9H098 131 aa3.89□□□□□ -1.79
NEB-201ENST00000172853 SIL1Q9H173 461 aa3.89□□□□□ -1.79
NEB-201ENST00000172853 MMRN2Q9H8L6 949 aa3.89□□□□□ -1.79
NEB-201ENST00000172853 EXOC7Q9UPT5 735 aa3.89□□□□□ -1.79
NEB-201ENST00000172853 RAB11FIP4Q86YS3 637 aa3.89□□□□□ -1.79
NEB-201ENST00000172853 SPDYE1Q8NFV5 336 aaPredicted RBP3.89□□□□□ -1.79
NEB-201ENST00000172853 EDEM3Q9BZQ6 932 aa3.89□□□□□ -1.79
NEB-201ENST00000172853 ELF1P32519 619 aa3.89□□□□□ -1.79
NEB-201ENST00000172853 TAF11Q15544 211 aa3.89□□□□□ -1.79
NEB-201ENST00000172853 ELMOD1Q8N336 334 aa3.89□□□□□ -1.79
NEB-201ENST00000172853 MICAL1Q8TDZ2 1067 aa3.89□□□□□ -1.79
NEB-201ENST00000172853 CCPG1Q9ULG6 757 aa3.89□□□□□ -1.79
NEB-201ENST00000172853 P4HA1P13674 534 aa3.89□□□□□ -1.79
NEB-201ENST00000172853 IFNA8P32881 189 aa3.89□□□□□ -1.79
NEB-201ENST00000172853 DCPSQ96C86 337 aaKnown RBP3.89□□□□□ -1.79
NEB-201ENST00000172853 UPF3BQ9BZI7 483 aaKnown RBP3.89□□□□□ -1.79
NEB-201ENST00000172853 FAM95CA0A1B0GW59 222 aa3.89□□□□□ -1.79
NEB-201ENST00000172853 FAM47CQ5HY64 1035 aa3.89□□□□□ -1.79
NEB-201ENST00000172853 NDUFAF2Q8N183 169 aa3.89□□□□□ -1.79
NEB-201ENST00000172853 FAM43AQ8N2R8 423 aa3.89□□□□□ -1.79
NEB-201ENST00000172853 ABL1P00519 1130 aa3.88□□□□□ -1.79
NEB-201ENST00000172853 IRX3P78415 501 aaPredicted RBP3.88□□□□□ -1.79
NEB-201ENST00000172853 KIFAP3Q92845 792 aa3.88□□□□□ -1.79
NEB-201ENST00000172853 ARHGEF1Q92888 912 aaKnown RBP3.88□□□□□ -1.79
NEB-201ENST00000172853 CDK19Q9BWU1 502 aa3.88□□□□□ -1.79
NEB-201ENST00000172853 TRIM35Q9UPQ4 493 aa3.88□□□□□ -1.79
NEB-201ENST00000172853 CCDC160A6NGH7 325 aa3.88□□□□□ -1.79
NEB-201ENST00000172853 OCM2P0CE71 109 aa3.88□□□□□ -1.79
NEB-201ENST00000172853 OCMP0CE72 109 aaPredicted RBP3.88□□□□□ -1.79
NEB-201ENST00000172853 TMTC1Q8IUR5 882 aa3.88□□□□□ -1.79
NEB-201ENST00000172853 RTCBQ9Y3I0 505 aaKnown RBP3.88□□□□□ -1.79
NEB-201ENST00000172853 CSADQ9Y600 493 aa3.88□□□□□ -1.79
NEB-201ENST00000172853 SLC12A7Q9Y666 1083 aa3.88□□□□□ -1.79
NEB-201ENST00000172853 IDEP14735 1019 aa3.88□□□□□ -1.79
NEB-201ENST00000172853 FAM177A1Q8N128 213 aaPredicted RBP3.88□□□□□ -1.79
NEB-201ENST00000172853 ZSCAN32Q9NX65 697 aa3.88□□□□□ -1.79
NEB-201ENST00000172853 DPYSL4O14531 572 aa3.88□□□□□ -1.79
NEB-201ENST00000172853 TACC1O75410 805 aa3.88□□□□□ -1.79
NEB-201ENST00000172853 CCDC38Q502W7 563 aa3.88□□□□□ -1.79
NEB-201ENST00000172853 YAF2Q8IY57 180 aa3.88□□□□□ -1.79
NEB-201ENST00000172853 NEUROG2Q9H2A3 272 aa3.88□□□□□ -1.79
NEB-201ENST00000172853 SYNDIG1Q9H7V2 258 aa3.88□□□□□ -1.79
NEB-201ENST00000172853 MAP10Q9P2G4 905 aa3.88□□□□□ -1.79
NEB-201ENST00000172853 CASQ2O14958 399 aaPredicted RBP3.88□□□□□ -1.79
NEB-201ENST00000172853 UQCRFS1P1P0C7P4 283 aa3.88□□□□□ -1.79
NEB-201ENST00000172853 ARHGAP25P42331 645 aa3.88□□□□□ -1.79
NEB-201ENST00000172853 RETREG2Q8NC44 543 aa3.88□□□□□ -1.79
NEB-201ENST00000172853 LBHD1Q9BQE6 289 aaPredicted RBP3.88□□□□□ -1.79
NEB-201ENST00000172853 TRAIPQ9BWF2 469 aa3.88□□□□□ -1.79
NEB-201ENST00000172853 CASQ1P31415 396 aa3.88□□□□□ -1.79
NEB-201ENST00000172853 PTGDRQ13258 359 aa3.88□□□□□ -1.79
NEB-201ENST00000172853 HLTFQ14527 1009 aaKnown RBP eCLIP3.88□□□□□ -1.79
NEB-201ENST00000172853 NUTM1Q86Y26 1132 aa3.88□□□□□ -1.79
NEB-201ENST00000172853 CHMP6Q96FZ7 201 aa3.88□□□□□ -1.79
NEB-201ENST00000172853 PTPRGP23470 1445 aa3.88□□□□□ -1.79
NEB-201ENST00000172853 CCDC50Q8IVM0 306 aa3.88□□□□□ -1.79
NEB-201ENST00000172853 CCDC170Q8IYT3 715 aa3.88□□□□□ -1.79
NEB-201ENST00000172853 PANK3Q9H999 370 aa3.88□□□□□ -1.79
NEB-201ENST00000172853 HNRNPCL2B2RXH8 293 aa3.88□□□□□ -1.79
NEB-201ENST00000172853 HNRNPCL1O60812 293 aaKnown RBP3.88□□□□□ -1.79
NEB-201ENST00000172853 PLCB3Q01970 1234 aa3.88□□□□□ -1.79
NEB-201ENST00000172853 INF2Q27J81 1249 aa3.88□□□□□ -1.79
NEB-201ENST00000172853 TTC22Q5TAA0 569 aa3.88□□□□□ -1.79
NEB-201ENST00000172853 MORC4Q8TE76 937 aa3.88□□□□□ -1.79
NEB-201ENST00000172853 NUP88Q99567 741 aaPredicted RBP3.88□□□□□ -1.79
NEB-201ENST00000172853 NUF2Q9BZD4 464 aa3.88□□□□□ -1.79
NEB-201ENST00000172853 RMND1Q9NWS8 449 aa3.88□□□□□ -1.79
NEB-201ENST00000172853 MYBBP1AQ9BQG0 1328 aaKnown RBP3.88□□□□□ -1.79
NEB-201ENST00000172853 H0YIN7 160 aa3.88□□□□□ -1.79
NEB-201ENST00000172853 ITIH3Q06033 890 aa3.88□□□□□ -1.79
NEB-201ENST00000172853 MED10Q9BTT4 135 aa3.88□□□□□ -1.79
NEB-201ENST00000172853 SYNJ1O43426 1573 aa3.88□□□□□ -1.79
NEB-201ENST00000172853 SPDYE2BA6NHP3 402 aa3.88□□□□□ -1.79
NEB-201ENST00000172853 SLC4A2P04920 1241 aa3.88□□□□□ -1.79
NEB-201ENST00000172853 SPDYE6P0CI01 402 aa3.88□□□□□ -1.79
NEB-201ENST00000172853 ZNF772Q68DY9 489 aaPredicted RBP3.88□□□□□ -1.79
NEB-201ENST00000172853 ARHGAP27Q6ZUM4 889 aa3.88□□□□□ -1.79
NEB-201ENST00000172853 IFIT3O14879 490 aaKnown RBP3.88□□□□□ -1.79
NEB-201ENST00000172853 SLC4A8Q2Y0W8 1093 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms