RNA–Protein interactions for RNA: ENST00000011898.9

TSPAN9-201, Transcript of tetraspanin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN9, Length 4,323 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-201ENST00000011898 ANKRD13DQ6ZTN6 518 aa14.04□□□□□ -0.16
TSPAN9-201ENST00000011898 CCDC47Q96A33 483 aaKnown RBP14.04□□□□□ -0.16
TSPAN9-201ENST00000011898 ANTXR1Q9H6X2 564 aa14.04□□□□□ -0.16
TSPAN9-201ENST00000011898 CRB1P82279 1406 aa14.04□□□□□ -0.16
TSPAN9-201ENST00000011898 PCDH11XQ9BZA7 1347 aa14.03□□□□□ -0.16
TSPAN9-201ENST00000011898 PCDH11YQ9BZA8 1340 aa14.03□□□□□ -0.16
TSPAN9-201ENST00000011898 SMARCC1Q92922 1105 aaPredicted RBP14.03□□□□□ -0.16
TSPAN9-201ENST00000011898 EXOC5O00471 708 aa14.03□□□□□ -0.16
TSPAN9-201ENST00000011898 ALDH1L1O75891 902 aa14.03□□□□□ -0.16
TSPAN9-201ENST00000011898 CWF19L2Q2TBE0 894 aaKnown RBP14.03□□□□□ -0.16
TSPAN9-201ENST00000011898 MYCBPQ99417 103 aaPredicted RBP14.03□□□□□ -0.16
TSPAN9-201ENST00000011898 ANO10Q9NW15 660 aa14.03□□□□□ -0.16
TSPAN9-201ENST00000011898 BRPF1P55201 1214 aaPredicted RBP14.03□□□□□ -0.16
TSPAN9-201ENST00000011898 NAP1L1P55209 391 aaKnown RBP14.03□□□□□ -0.16
TSPAN9-201ENST00000011898 SLC39A6Q13433 755 aa14.03□□□□□ -0.16
TSPAN9-201ENST00000011898 MCM6Q14566 821 aa14.03□□□□□ -0.16
TSPAN9-201ENST00000011898 BRF1Q92994 677 aa14.03□□□□□ -0.16
TSPAN9-201ENST00000011898 MPHOSPH8Q99549 860 aa14.03□□□□□ -0.16
TSPAN9-201ENST00000011898 NACAP1Q9BZK3 213 aa14.03□□□□□ -0.16
TSPAN9-201ENST00000011898 ZSWIM4Q9H7M6 989 aa14.03□□□□□ -0.16
TSPAN9-201ENST00000011898 MTMR7Q9Y216 660 aa14.03□□□□□ -0.16
TSPAN9-201ENST00000011898 CPA1P15085 419 aa14.02□□□□□ -0.16
TSPAN9-201ENST00000011898 DDX46Q7L014 1031 aaKnown RBP14.02□□□□□ -0.16
TSPAN9-201ENST00000011898 COPS6Q7L5N1 327 aa14.02□□□□□ -0.16
TSPAN9-201ENST00000011898 C8orf76Q96K31 380 aa14.02□□□□□ -0.16
TSPAN9-201ENST00000011898 CDKL5O76039 1030 aa14.02□□□□□ -0.16
TSPAN9-201ENST00000011898 SARNPP82979 210 aaKnown RBP14.02□□□□□ -0.16
TSPAN9-201ENST00000011898 LINS1Q8NG48 757 aa14.02□□□□□ -0.16
TSPAN9-201ENST00000011898 NUP133Q8WUM0 1156 aa14.02□□□□□ -0.16
TSPAN9-201ENST00000011898 HMG20BQ9P0W2 317 aa14.02□□□□□ -0.16
TSPAN9-201ENST00000011898 CCDC69A6NI79 296 aa14.02□□□□□ -0.17
TSPAN9-201ENST00000011898 SYT1P21579 422 aa14.02□□□□□ -0.17
TSPAN9-201ENST00000011898 METTL24Q5JXM2 366 aa14.02□□□□□ -0.17
TSPAN9-201ENST00000011898 USP21Q9UK80 565 aa14.02□□□□□ -0.17
TSPAN9-201ENST00000011898 MARF1Q9Y4F3 1742 aaKnown RBP14.02□□□□□ -0.17
TSPAN9-201ENST00000011898 COL16A1Q07092 1604 aaPredicted RBP14.02□□□□□ -0.17
TSPAN9-201ENST00000011898 COL5A2P05997 1499 aaPredicted RBP14.02□□□□□ -0.17
TSPAN9-201ENST00000011898 CLSTN1O94985 981 aa14.01□□□□□ -0.17
TSPAN9-201ENST00000011898 LRRC2Q9BYS8 371 aa14.01□□□□□ -0.17
TSPAN9-201ENST00000011898 ZBTB3Q9H5J0 574 aa14.01□□□□□ -0.17
TSPAN9-201ENST00000011898 SNW1Q13573 536 aaKnown RBP14.01□□□□□ -0.17
TSPAN9-201ENST00000011898 XAGE3Q8WTP9 111 aa14.01□□□□□ -0.17
TSPAN9-201ENST00000011898 SNRKQ9NRH2 765 aa14.01□□□□□ -0.17
TSPAN9-201ENST00000011898 UNC5CLQ8IV45 518 aa14.01□□□□□ -0.17
TSPAN9-201ENST00000011898 AKAP2Q9Y2D5 859 aa14.01□□□□□ -0.17
TSPAN9-201ENST00000011898 VPS53Q5VIR6 699 aa14.01□□□□□ -0.17
TSPAN9-201ENST00000011898 ARFGAP3Q9NP61 516 aa14.01□□□□□ -0.17
TSPAN9-201ENST00000011898 DACT1Q9NYF0 836 aa14.01□□□□□ -0.17
TSPAN9-201ENST00000011898 TTC41PQ6P2S7 1318 aa14□□□□□ -0.17
TSPAN9-201ENST00000011898 GOLGA6L7A0A1B0GV03 622 aa14□□□□□ -0.17
TSPAN9-201ENST00000011898 SLU7O95391 586 aaKnown RBP14□□□□□ -0.17
TSPAN9-201ENST00000011898 GBP2P32456 591 aaPredicted RBP14□□□□□ -0.17
TSPAN9-201ENST00000011898 FSIP1Q8NA03 581 aa14□□□□□ -0.17
TSPAN9-201ENST00000011898 LMBRD1Q9NUN5 540 aa14□□□□□ -0.17
TSPAN9-201ENST00000011898 CFAP100Q494V2 611 aa14□□□□□ -0.17
TSPAN9-201ENST00000011898 FILIP1LQ4L180 1135 aa14□□□□□ -0.17
TSPAN9-201ENST00000011898 GBP3Q9H0R5 595 aa14□□□□□ -0.17
TSPAN9-201ENST00000011898 THRAP3Q9Y2W1 955 aaKnown RBP14□□□□□ -0.17
TSPAN9-201ENST00000011898 COL14A1Q05707 1796 aaKnown RBP14□□□□□ -0.17
TSPAN9-201ENST00000011898 CTAGE5O15320 804 aa14□□□□□ -0.17
TSPAN9-201ENST00000011898 DHX8Q14562 1220 aaKnown RBP14□□□□□ -0.17
TSPAN9-201ENST00000011898 GAS2L3Q86XJ1 694 aa14□□□□□ -0.17
TSPAN9-201ENST00000011898 GBP6Q6ZN66 633 aa13.99□□□□□ -0.17
TSPAN9-201ENST00000011898 AIDAQ96BJ3 306 aa13.99□□□□□ -0.17
TSPAN9-201ENST00000011898 RAD21O60216 631 aa13.99□□□□□ -0.17
TSPAN9-201ENST00000011898 SNRPA1P09661 255 aaKnown RBP13.99□□□□□ -0.17
TSPAN9-201ENST00000011898 CEP57Q86XR8 500 aa13.99□□□□□ -0.17
TSPAN9-201ENST00000011898 DCAF5Q96JK2 942 aa13.99□□□□□ -0.17
TSPAN9-201ENST00000011898 SMTNL1A8MU46 457 aa13.99□□□□□ -0.17
TSPAN9-201ENST00000011898 ZBTB22O15209 634 aa13.99□□□□□ -0.17
TSPAN9-201ENST00000011898 ZNF445P59923 1031 aa13.99□□□□□ -0.17
TSPAN9-201ENST00000011898 NMIQ13287 307 aaPredicted RBP13.99□□□□□ -0.17
TSPAN9-201ENST00000011898 RNMTO43148 476 aaKnown RBP13.99□□□□□ -0.17
TSPAN9-201ENST00000011898 CD2BP2O95400 341 aaKnown RBP13.99□□□□□ -0.17
TSPAN9-201ENST00000011898 HAND2P61296 217 aa13.99□□□□□ -0.17
TSPAN9-201ENST00000011898 PLEKHG2Q9H7P9 1386 aa13.99□□□□□ -0.17
TSPAN9-201ENST00000011898 NCAPD2Q15021 1401 aa13.98□□□□□ -0.17
TSPAN9-201ENST00000011898 FAM208AQ9UK61 1670 aaKnown RBP13.98□□□□□ -0.17
TSPAN9-201ENST00000011898 CAMTA1Q9Y6Y1 1673 aa13.98□□□□□ -0.17
TSPAN9-201ENST00000011898 ZNF213O14771 459 aa13.98□□□□□ -0.17
TSPAN9-201ENST00000011898 PIP4K2AP48426 406 aaPredicted RBP13.98□□□□□ -0.17
TSPAN9-201ENST00000011898 IFIT5Q13325 482 aaKnown RBP13.98□□□□□ -0.17
TSPAN9-201ENST00000011898 PKP1Q13835 747 aa13.98□□□□□ -0.17
TSPAN9-201ENST00000011898 DDB1Q16531 1140 aa13.98□□□□□ -0.17
TSPAN9-201ENST00000011898 ARHGAP29Q52LW3 1261 aa13.98□□□□□ -0.17
TSPAN9-201ENST00000011898 FAM200AQ8TCP9 573 aa13.98□□□□□ -0.17
TSPAN9-201ENST00000011898 BABAM1Q9NWV8 329 aa13.98□□□□□ -0.17
TSPAN9-201ENST00000011898 NBPF7P0C2Y1 421 aaPredicted RBP13.98□□□□□ -0.17
TSPAN9-201ENST00000011898 PIBF1Q8WXW3 757 aa13.98□□□□□ -0.17
TSPAN9-201ENST00000011898 ZNF500O60304 480 aaPredicted RBP13.98□□□□□ -0.17
TSPAN9-201ENST00000011898 PHACTR2O75167 634 aa13.97□□□□□ -0.17
TSPAN9-201ENST00000011898 POLR3DP05423 398 aaPredicted RBP13.97□□□□□ -0.17
TSPAN9-201ENST00000011898 CREB3L3Q68CJ9 461 aa13.97□□□□□ -0.17
TSPAN9-201ENST00000011898 CCDC82Q8N4S0 544 aa13.97□□□□□ -0.17
TSPAN9-201ENST00000011898 COL22A1Q8NFW1 1626 aaPredicted RBP13.97□□□□□ -0.17
TSPAN9-201ENST00000011898 GOLGA8BA8MQT2 603 aa13.97□□□□□ -0.17
TSPAN9-201ENST00000011898 CBFA2T2O43439 604 aa13.97□□□□□ -0.17
TSPAN9-201ENST00000011898 DTNBO60941 627 aa13.97□□□□□ -0.17
TSPAN9-201ENST00000011898 STARD3NLO95772 234 aa13.97□□□□□ -0.17
TSPAN9-201ENST00000011898 PHKG2P15735 406 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms