RNA–Protein interactions for RNA: ENST00000002596.5

HS3ST1-201, Transcript of heparan sulfate-glucosamine 3-sulfotransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HS3ST1, Length 8,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HS3ST1-201ENST00000002596 ATP2A1O14983 1001 aa13.97□□□□□ -0.17
HS3ST1-201ENST00000002596 PCK1P35558 622 aa13.97□□□□□ -0.17
HS3ST1-201ENST00000002596 EXOC5O00471 708 aa13.97□□□□□ -0.17
HS3ST1-201ENST00000002596 MAP7Q14244 749 aa13.97□□□□□ -0.17
HS3ST1-201ENST00000002596 MFSD6Q6ZSS7 791 aa13.97□□□□□ -0.17
HS3ST1-201ENST00000002596 STMN4Q9H169 189 aaPredicted RBP13.97□□□□□ -0.17
HS3ST1-201ENST00000002596 RPAP2Q8IXW5 612 aaPredicted RBP13.97□□□□□ -0.17
HS3ST1-201ENST00000002596 GIPC1O14908 333 aa13.97□□□□□ -0.17
HS3ST1-201ENST00000002596 TTLL3Q9Y4R7 772 aa13.97□□□□□ -0.17
HS3ST1-201ENST00000002596 RPGRIP1LQ68CZ1 1315 aa13.97□□□□□ -0.17
HS3ST1-201ENST00000002596 TMEM67Q5HYA8 995 aa13.97□□□□□ -0.17
HS3ST1-201ENST00000002596 CCDC110Q8TBZ0 833 aa13.97□□□□□ -0.17
HS3ST1-201ENST00000002596 GDPD2Q9HCC8 539 aa13.97□□□□□ -0.17
HS3ST1-201ENST00000002596 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.97□□□□□ -0.17
HS3ST1-201ENST00000002596 TFIP11Q9UBB9 837 aaKnown RBP13.96□□□□□ -0.17
HS3ST1-201ENST00000002596 SYF2O95926 243 aaKnown RBP13.96□□□□□ -0.17
HS3ST1-201ENST00000002596 VCX3BQ9H321 246 aa13.96□□□□□ -0.17
HS3ST1-201ENST00000002596 GRIN2BQ13224 1484 aa13.96□□□□□ -0.17
HS3ST1-201ENST00000002596 LRRC9Q6ZRR7 1453 aa13.96□□□□□ -0.17
HS3ST1-201ENST00000002596 IL1RL1Q01638 556 aa13.96□□□□□ -0.17
HS3ST1-201ENST00000002596 NCOA2Q15596 1464 aa13.96□□□□□ -0.17
HS3ST1-201ENST00000002596 TLDC2A0PJX2 215 aa13.96□□□□□ -0.17
HS3ST1-201ENST00000002596 CALCOCO2Q13137 446 aa13.96□□□□□ -0.17
HS3ST1-201ENST00000002596 TAF7Q15545 349 aaPredicted RBP13.96□□□□□ -0.18
HS3ST1-201ENST00000002596 MCM10Q7L590 875 aa13.96□□□□□ -0.18
HS3ST1-201ENST00000002596 SPECC1L-ADORA2AF8WAN1 911 aa13.96□□□□□ -0.18
HS3ST1-201ENST00000002596 PPFIA3O75145 1194 aa13.96□□□□□ -0.18
HS3ST1-201ENST00000002596 FAM180AQ6UWF9 173 aa13.96□□□□□ -0.18
HS3ST1-201ENST00000002596 LIMCH1Q9UPQ0 1083 aa13.96□□□□□ -0.18
HS3ST1-201ENST00000002596 NFE2L2Q16236 605 aa13.95□□□□□ -0.18
HS3ST1-201ENST00000002596 E7EVH7 732 aa13.95□□□□□ -0.18
HS3ST1-201ENST00000002596 NEMFO60524 1076 aa13.95□□□□□ -0.18
HS3ST1-201ENST00000002596 IRAK4Q9NWZ3 460 aa13.95□□□□□ -0.18
HS3ST1-201ENST00000002596 TSPY3P0CV98 308 aa13.95□□□□□ -0.18
HS3ST1-201ENST00000002596 TSPY8P0CW00 308 aa13.95□□□□□ -0.18
HS3ST1-201ENST00000002596 PPFIA1Q13136 1202 aa13.95□□□□□ -0.18
HS3ST1-201ENST00000002596 KIFC2Q96AC6 838 aa13.95□□□□□ -0.18
HS3ST1-201ENST00000002596 HAUS2Q9NVX0 235 aa13.95□□□□□ -0.18
HS3ST1-201ENST00000002596 CPLX4Q7Z7G2 160 aa13.95□□□□□ -0.18
HS3ST1-201ENST00000002596 TMEM57Q8N5G2 664 aa13.95□□□□□ -0.18
HS3ST1-201ENST00000002596 CAPZA3Q96KX2 299 aa13.94□□□□□ -0.18
HS3ST1-201ENST00000002596 TRIM47Q96LD4 638 aa13.94□□□□□ -0.18
HS3ST1-201ENST00000002596 MX1P20591 662 aa13.94□□□□□ -0.18
HS3ST1-201ENST00000002596 ARHGEF2Q92974 986 aaKnown RBP13.94□□□□□ -0.18
HS3ST1-201ENST00000002596 ZBTB21Q9ULJ3 1066 aa13.94□□□□□ -0.18
HS3ST1-201ENST00000002596 EFCAB5A4FU69 1503 aa13.94□□□□□ -0.18
HS3ST1-201ENST00000002596 SLC4A1P02730 911 aa13.94□□□□□ -0.18
HS3ST1-201ENST00000002596 NEDD9Q14511 834 aa13.94□□□□□ -0.18
HS3ST1-201ENST00000002596 C4orf50Q6ZRC1 276 aa13.94□□□□□ -0.18
HS3ST1-201ENST00000002596 NBPF7P0C2Y1 421 aaPredicted RBP13.94□□□□□ -0.18
HS3ST1-201ENST00000002596 RAB3IPQ96QF0 476 aaPredicted RBP13.94□□□□□ -0.18
HS3ST1-201ENST00000002596 DUSP27Q5VZP5 1158 aa13.94□□□□□ -0.18
HS3ST1-201ENST00000002596 NACA2Q9H009 215 aa13.94□□□□□ -0.18
HS3ST1-201ENST00000002596 BLVRAP53004 296 aa13.94□□□□□ -0.18
HS3ST1-201ENST00000002596 TSTA3Q13630 321 aaPredicted RBP13.94□□□□□ -0.18
HS3ST1-201ENST00000002596 TTC30BQ8N4P2 665 aa13.94□□□□□ -0.18
HS3ST1-201ENST00000002596 RSRC1Q96IZ7 334 aaKnown RBP13.94□□□□□ -0.18
HS3ST1-201ENST00000002596 ZNF131P52739 623 aa13.94□□□□□ -0.18
HS3ST1-201ENST00000002596 CCDC152Q4G0S7 254 aa13.94□□□□□ -0.18
HS3ST1-201ENST00000002596 ANKRD35Q8N283 1001 aa13.94□□□□□ -0.18
HS3ST1-201ENST00000002596 BZW2Q9Y6E2 419 aaKnown RBP13.94□□□□□ -0.18
HS3ST1-201ENST00000002596 PPP1R7Q15435 360 aa13.93□□□□□ -0.18
HS3ST1-201ENST00000002596 IFT81Q8WYA0 676 aa13.93□□□□□ -0.18
HS3ST1-201ENST00000002596 GTF3C6Q969F1 213 aa13.93□□□□□ -0.18
HS3ST1-201ENST00000002596 SPAG5Q96R06 1193 aa13.93□□□□□ -0.18
HS3ST1-201ENST00000002596 ARFGAP3Q9NP61 516 aa13.93□□□□□ -0.18
HS3ST1-201ENST00000002596 CCDC141Q6ZP82 1450 aa13.93□□□□□ -0.18
HS3ST1-201ENST00000002596 ATP2A2P16615 1042 aaKnown RBP13.93□□□□□ -0.18
HS3ST1-201ENST00000002596 UBASH3AP57075 661 aa13.93□□□□□ -0.18
HS3ST1-201ENST00000002596 ATP11AP98196 1134 aa13.93□□□□□ -0.18
HS3ST1-201ENST00000002596 CCDC8Q9H0W5 538 aaPredicted RBP13.93□□□□□ -0.18
HS3ST1-201ENST00000002596 VCXQ9H320 206 aa13.93□□□□□ -0.18
HS3ST1-201ENST00000002596 SPDYE16A6NNV3 312 aaPredicted RBP13.93□□□□□ -0.18
HS3ST1-201ENST00000002596 GJB2P29033 226 aa13.93□□□□□ -0.18
HS3ST1-201ENST00000002596 SPDYE2Q495Y8 402 aa13.93□□□□□ -0.18
HS3ST1-201ENST00000002596 ACBD5Q5T8D3 534 aaPredicted RBP13.93□□□□□ -0.18
HS3ST1-201ENST00000002596 JAKMIP2Q96AA8 810 aa13.93□□□□□ -0.18
HS3ST1-201ENST00000002596 AGTPBP1Q9UPW5 1226 aa13.93□□□□□ -0.18
HS3ST1-201ENST00000002596 PAXBP1Q9Y5B6 917 aa13.93□□□□□ -0.18
HS3ST1-201ENST00000002596 LMOD1P29536 600 aaPredicted RBP13.93□□□□□ -0.18
HS3ST1-201ENST00000002596 HMGB1P1B2RPK0 211 aaPredicted RBP13.93□□□□□ -0.18
HS3ST1-201ENST00000002596 STAT6P42226 847 aa13.93□□□□□ -0.18
HS3ST1-201ENST00000002596 SLC12A5Q9H2X9 1139 aa13.93□□□□□ -0.18
HS3ST1-201ENST00000002596 AK9Q5TCS8 1911 aa13.93□□□□□ -0.18
HS3ST1-201ENST00000002596 N4BP3O15049 544 aa13.92□□□□□ -0.18
HS3ST1-201ENST00000002596 SP4Q02446 784 aa13.92□□□□□ -0.18
HS3ST1-201ENST00000002596 CSPG5O95196 566 aa13.92□□□□□ -0.18
HS3ST1-201ENST00000002596 KRT9P35527 623 aa13.92□□□□□ -0.18
HS3ST1-201ENST00000002596 CCDC77Q9BR77 488 aa13.92□□□□□ -0.18
HS3ST1-201ENST00000002596 C6orf50Q9HD87 102 aa13.92□□□□□ -0.18
HS3ST1-201ENST00000002596 METAP2P50579 478 aaKnown RBP eCLIP13.92□□□□□ -0.18
HS3ST1-201ENST00000002596 RAB11FIP4Q86YS3 637 aa13.92□□□□□ -0.18
HS3ST1-201ENST00000002596 CTAGE1Q96RT6 745 aa13.92□□□□□ -0.18
HS3ST1-201ENST00000002596 RBM27Q9P2N5 1060 aaKnown RBP13.92□□□□□ -0.18
HS3ST1-201ENST00000002596 INTS8Q75QN2 995 aaKnown RBP13.92□□□□□ -0.18
HS3ST1-201ENST00000002596 IVLP07476 585 aa13.92□□□□□ -0.18
HS3ST1-201ENST00000002596 AFMP43652 599 aa13.92□□□□□ -0.18
HS3ST1-201ENST00000002596 IFIT1BQ5T764 474 aaKnown RBP13.92□□□□□ -0.18
HS3ST1-201ENST00000002596 CCDC61Q9Y6R9 512 aa13.92□□□□□ -0.18
HS3ST1-201ENST00000002596 SSFA2P28290 1259 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms