RNA–Protein interactions for RNA: ENSMUST00000209979.1

Ptpre-204, Transcript of Receptor-type tyrosine-protein phosphatase epsilon, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Ptpre, Length 4,959 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptpre-204ENSMUST00000209979 Nlrp4cQ3TKR3 982 aa10.23□□□□□ -0.77
Ptpre-204ENSMUST00000209979 LgsnQ8CIX8 563 aa10.23□□□□□ -0.77
Ptpre-204ENSMUST00000209979 Flad1Q8R123 492 aa10.23□□□□□ -0.77
Ptpre-204ENSMUST00000209979 TrdnE9Q9K5 693 aa10.23□□□□□ -0.77
Ptpre-204ENSMUST00000209979 IkbkgO88522 412 aa10.23□□□□□ -0.77
Ptpre-204ENSMUST00000209979 Mier3Q3UHF3 551 aa10.23□□□□□ -0.77
Ptpre-204ENSMUST00000209979 Fam204aQ8C6C7 236 aa10.23□□□□□ -0.77
Ptpre-204ENSMUST00000209979 Trim68Q8K243 485 aa10.23□□□□□ -0.77
Ptpre-204ENSMUST00000209979 Osbpl1aQ91XL9 950 aa10.23□□□□□ -0.77
Ptpre-204ENSMUST00000209979 Bcar3Q9QZK2 820 aa10.23□□□□□ -0.77
Ptpre-204ENSMUST00000209979 Cetn3O35648 167 aa10.23□□□□□ -0.77
Ptpre-204ENSMUST00000209979 EmbP21995 330 aa10.23□□□□□ -0.77
Ptpre-204ENSMUST00000209979 Surf6P70279 355 aaKnown RBP10.23□□□□□ -0.77
Ptpre-204ENSMUST00000209979 MpripP97434 1024 aa10.23□□□□□ -0.77
Ptpre-204ENSMUST00000209979 Lrriq3Q14DL3 633 aa10.23□□□□□ -0.77
Ptpre-204ENSMUST00000209979 Soga3Q6NZL0 945 aa10.23□□□□□ -0.77
Ptpre-204ENSMUST00000209979 Matr3Q8K310 846 aaKnown RBP10.23□□□□□ -0.77
Ptpre-204ENSMUST00000209979 Bmp2kQ91Z96 1138 aa10.23□□□□□ -0.77
Ptpre-204ENSMUST00000209979 Rufy3Q9D394 469 aa10.23□□□□□ -0.77
Ptpre-204ENSMUST00000209979 PrxO55103 1391 aa10.23□□□□□ -0.77
Ptpre-204ENSMUST00000209979 S100bP50114 92 aa10.23□□□□□ -0.77
Ptpre-204ENSMUST00000209979 Kmt5bQ3U8K7 883 aa10.23□□□□□ -0.77
Ptpre-204ENSMUST00000209979 Ptpn14Q62130 1189 aa10.23□□□□□ -0.77
Ptpre-204ENSMUST00000209979 U2af1l4Q8BGJ9 220 aa10.23□□□□□ -0.77
Ptpre-204ENSMUST00000209979 Cul5Q9D5V5 780 aa10.23□□□□□ -0.77
Ptpre-204ENSMUST00000209979 Ccdc13D3YV10 709 aa10.22□□□□□ -0.77
Ptpre-204ENSMUST00000209979 PrphP15331 475 aa10.22□□□□□ -0.77
Ptpre-204ENSMUST00000209979 Ppp2r5eQ61151 467 aa10.22□□□□□ -0.77
Ptpre-204ENSMUST00000209979 Tmem87bQ8BKU8 555 aa10.22□□□□□ -0.77
Ptpre-204ENSMUST00000209979 Kdm4cQ8VCD7 1054 aa10.22□□□□□ -0.77
Ptpre-204ENSMUST00000209979 Il16O54824 1322 aa10.22□□□□□ -0.77
Ptpre-204ENSMUST00000209979 Cep85lA0A1W2P884 806 aa10.22□□□□□ -0.77
Ptpre-204ENSMUST00000209979 Slc7a3P70423 618 aa10.22□□□□□ -0.77
Ptpre-204ENSMUST00000209979 KaznQ69ZS8 779 aa10.22□□□□□ -0.77
Ptpre-204ENSMUST00000209979 Aldh8a1Q8BH00 487 aa10.22□□□□□ -0.77
Ptpre-204ENSMUST00000209979 Ccdc113Q8C5T8 377 aa10.22□□□□□ -0.77
Ptpre-204ENSMUST00000209979 SsbP32067 415 aaKnown RBP10.22□□□□□ -0.77
Ptpre-204ENSMUST00000209979 Rrp1P56183 494 aaKnown RBP10.22□□□□□ -0.77
Ptpre-204ENSMUST00000209979 Gm21985Q6P6P5 1106 aa10.22□□□□□ -0.77
Ptpre-204ENSMUST00000209979 Actr5Q80US4 605 aaKnown RBP10.22□□□□□ -0.77
Ptpre-204ENSMUST00000209979 Daam1Q8BPM0 1077 aa10.22□□□□□ -0.77
Ptpre-204ENSMUST00000209979 Lonp1Q8CGK3 949 aaKnown RBP10.22□□□□□ -0.77
Ptpre-204ENSMUST00000209979 Satb2Q8VI24 733 aa10.22□□□□□ -0.77
Ptpre-204ENSMUST00000209979 Arhgef5E9Q7D5 1581 aa10.22□□□□□ -0.77
Ptpre-204ENSMUST00000209979 Proca1B0QZF7 307 aa10.22□□□□□ -0.77
Ptpre-204ENSMUST00000209979 Taf4bG5E8Z2 855 aa10.22□□□□□ -0.77
Ptpre-204ENSMUST00000209979 Tnni2P13412 182 aa10.22□□□□□ -0.77
Ptpre-204ENSMUST00000209979 Nucb1Q02819 459 aaKnown RBP10.22□□□□□ -0.77
Ptpre-204ENSMUST00000209979 Nlrp4fQ66X05 959 aa10.22□□□□□ -0.77
Ptpre-204ENSMUST00000209979 HhatQ8BMT9 499 aa10.22□□□□□ -0.77
Ptpre-204ENSMUST00000209979 Ccdc28aQ8CEI3 192 aa10.22□□□□□ -0.77
Ptpre-204ENSMUST00000209979 Pde3aQ9Z0X4 1141 aa10.22□□□□□ -0.77
Ptpre-204ENSMUST00000209979 Bicdl1A0JNT9 577 aa10.21□□□□□ -0.77
Ptpre-204ENSMUST00000209979 Speer4f2E9Q366 295 aa10.21□□□□□ -0.77
Ptpre-204ENSMUST00000209979 Ubash3aQ3V3E1 624 aa10.21□□□□□ -0.77
Ptpre-204ENSMUST00000209979 Ano1Q8BHY3 960 aa10.21□□□□□ -0.77
Ptpre-204ENSMUST00000209979 Tsr2Q8C8T8 191 aa10.21□□□□□ -0.77
Ptpre-204ENSMUST00000209979 Slc4a8Q8JZR6 1089 aa10.21□□□□□ -0.77
Ptpre-204ENSMUST00000209979 Sh2b1Q91ZM2 756 aa10.21□□□□□ -0.77
Ptpre-204ENSMUST00000209979 Tekt2Q922G7 430 aa10.21□□□□□ -0.77
Ptpre-204ENSMUST00000209979 Znf394Q9Z1D9 521 aa10.21□□□□□ -0.77
Ptpre-204ENSMUST00000209979 Samd15F6XZJ7 620 aa10.21□□□□□ -0.77
Ptpre-204ENSMUST00000209979 Fam163aQ8CAA5 168 aa10.21□□□□□ -0.77
Ptpre-204ENSMUST00000209979 Xab2Q9DCD2 855 aaKnown RBP10.21□□□□□ -0.77
Ptpre-204ENSMUST00000209979 PalmQ9Z0P4 383 aa10.21□□□□□ -0.77
Ptpre-204ENSMUST00000209979 Gm5935Q497S0 212 aa10.21□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Wdr44Q6NVE8 915 aa10.21□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Hook2Q7TMK6 716 aa10.21□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Usp8Q80U87 1080 aa10.21□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Tmx1Q8VBT0 278 aa10.21□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Vps16Q920Q4 839 aa10.21□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Tsnaxip1Q99P25 704 aa10.21□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Zbtb12Q9Z150 459 aa10.21□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Ubn2Q80WC1 1314 aa10.21□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Asxl1P59598 1514 aa10.21□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Gm45015A0A140LII9 184 aa10.21□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Tldc2A2ACG1 198 aa10.21□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Q3UPC7 1272 aa10.21□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Cyp4f39Q8BGU0 532 aa10.21□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Trim7Q923T7 510 aa10.21□□□□□ -0.78
Ptpre-204ENSMUST00000209979 ByslO54825 436 aaKnown RBP10.2□□□□□ -0.78
Ptpre-204ENSMUST00000209979 S100a5P63084 93 aa10.2□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Wdr93Q402B2 695 aa10.2□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Igf2bp2Q5SF07 592 aaKnown RBP10.2□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Cnot10Q8BH15 744 aa10.2□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Cep57Q8CEE0 500 aa10.2□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Msantd4Q91YU3 345 aa10.2□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Kdm2bQ6P1G2 1309 aa10.2□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Ano9P86044 747 aa10.2□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Pank2Q3U4S0 443 aa10.2□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Zranb3Q6NZP1 1069 aa10.2□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Fchsd1Q6PFY1 688 aa10.2□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Klhdc4Q921I2 584 aa10.2□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Psmd6Q99JI4 389 aa10.2□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Trim34aQ99PP6 485 aa10.2□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Zmym3Q9JLM4 1370 aa10.2□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Bach2P97303 839 aa10.2□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Igsf3Q6ZQA6 1194 aa10.2□□□□□ -0.78
Ptpre-204ENSMUST00000209979 Ttc19Q8CC21 365 aa10.2□□□□□ -0.78
Ptpre-204ENSMUST00000209979 TkfcQ8VC30 578 aa10.2□□□□□ -0.78
Retrieved 100 of 22,080 RNA–protein pairs in 27.5 ms