RNA–Protein interactions for RNA: ENSMUST00000113717.7

Sptan1-204, Transcript of Spectrin alpha chain, non-erythrocytic 1, mousemouse

TSL 1 (best) BASIC

Gene Sptan1, Length 7,958 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sptan1-204ENSMUST00000113717 Gtf3c5Q8R2T8 520 aa12.28□□□□□ -0.44
Sptan1-204ENSMUST00000113717 Spocd1B1ASB6 936 aa12.27□□□□□ -0.44
Sptan1-204ENSMUST00000113717 SsbP32067 415 aaKnown RBP12.27□□□□□ -0.44
Sptan1-204ENSMUST00000113717 Tcerg1lQ3B807 590 aa12.27□□□□□ -0.44
Sptan1-204ENSMUST00000113717 Zmym3Q9JLM4 1370 aa12.27□□□□□ -0.44
Sptan1-204ENSMUST00000113717 Frat1P70339 274 aa12.27□□□□□ -0.44
Sptan1-204ENSMUST00000113717 Jade3Q6IE82 823 aa12.27□□□□□ -0.44
Sptan1-204ENSMUST00000113717 Ankrd26Q811D2 1581 aa12.27□□□□□ -0.45
Sptan1-204ENSMUST00000113717 Map3k9Q3U1V8 1077 aa12.27□□□□□ -0.45
Sptan1-204ENSMUST00000113717 Kiaa1211Q5PR69 1207 aa12.27□□□□□ -0.45
Sptan1-204ENSMUST00000113717 EsrrbQ61539 433 aa12.27□□□□□ -0.45
Sptan1-204ENSMUST00000113717 BrapQ99MP8 591 aa12.27□□□□□ -0.45
Sptan1-204ENSMUST00000113717 Sh2d4bA6X942 431 aa12.27□□□□□ -0.45
Sptan1-204ENSMUST00000113717 Gadd45bP22339 160 aa12.27□□□□□ -0.45
Sptan1-204ENSMUST00000113717 Atp8b2P98199 1209 aa12.27□□□□□ -0.45
Sptan1-204ENSMUST00000113717 Eif2aQ8BJW6 581 aaKnown RBP12.27□□□□□ -0.45
Sptan1-204ENSMUST00000113717 F2rP30558 430 aa12.27□□□□□ -0.45
Sptan1-204ENSMUST00000113717 Slc4a4O88343 1079 aa12.26□□□□□ -0.45
Sptan1-204ENSMUST00000113717 Eef2P58252 858 aaKnown RBP12.26□□□□□ -0.45
Sptan1-204ENSMUST00000113717 FerP70451 823 aa12.26□□□□□ -0.45
Sptan1-204ENSMUST00000113717 Dzip1lQ499E4 774 aa12.26□□□□□ -0.45
Sptan1-204ENSMUST00000113717 Fam135bQ9DAI6 1403 aa12.26□□□□□ -0.45
Sptan1-204ENSMUST00000113717 Gm10563F6WIE4 79 aa12.26□□□□□ -0.45
Sptan1-204ENSMUST00000113717 Gsta4P24472 222 aa12.26□□□□□ -0.45
Sptan1-204ENSMUST00000113717 P4ha1Q60715 534 aa12.26□□□□□ -0.45
Sptan1-204ENSMUST00000113717 Ccdc82Q6PG04 518 aa12.26□□□□□ -0.45
Sptan1-204ENSMUST00000113717 Haus1Q8BHX1 278 aa12.26□□□□□ -0.45
Sptan1-204ENSMUST00000113717 Dclk3Q8BWQ5 790 aa12.26□□□□□ -0.45
Sptan1-204ENSMUST00000113717 Tsnaxip1Q99P25 704 aa12.26□□□□□ -0.45
Sptan1-204ENSMUST00000113717 Rdm1Q9CQK3 281 aa12.26□□□□□ -0.45
Sptan1-204ENSMUST00000113717 Nop56Q9D6Z1 580 aaKnown RBP12.26□□□□□ -0.45
Sptan1-204ENSMUST00000113717 Tex13c2A0A0G2JGA3 530 aa12.26□□□□□ -0.45
Sptan1-204ENSMUST00000113717 Calm1P0DP26 149 aaKnown RBP12.26□□□□□ -0.45
Sptan1-204ENSMUST00000113717 Calm2P0DP27 149 aaKnown RBP12.26□□□□□ -0.45
Sptan1-204ENSMUST00000113717 Calm3P0DP28 149 aaKnown RBP12.26□□□□□ -0.45
Sptan1-204ENSMUST00000113717 Ccdc129Q14B48 1034 aa12.26□□□□□ -0.45
Sptan1-204ENSMUST00000113717 Ifit2Q64112 472 aa12.26□□□□□ -0.45
Sptan1-204ENSMUST00000113717 Kdm1aQ6ZQ88 853 aa12.26□□□□□ -0.45
Sptan1-204ENSMUST00000113717 Ndufab1Q9CR21 156 aa12.26□□□□□ -0.45
Sptan1-204ENSMUST00000113717 TrdnE9Q9K5 693 aa12.26□□□□□ -0.45
Sptan1-204ENSMUST00000113717 Myo1bP46735 1107 aa12.26□□□□□ -0.45
Sptan1-204ENSMUST00000113717 Psmb7P70195 277 aa12.26□□□□□ -0.45
Sptan1-204ENSMUST00000113717 SkiQ60698 725 aa12.26□□□□□ -0.45
Sptan1-204ENSMUST00000113717 IqcdQ9D3V1 458 aa12.26□□□□□ -0.45
Sptan1-204ENSMUST00000113717 Cavin2Q63918 418 aaKnown RBP12.25□□□□□ -0.45
Sptan1-204ENSMUST00000113717 4933428M09RikQ9D3X3 192 aa12.25□□□□□ -0.45
Sptan1-204ENSMUST00000113717 Gdpd2Q9ESM6 539 aa12.25□□□□□ -0.45
Sptan1-204ENSMUST00000113717 Ifit1bl2Q3U687 466 aa12.25□□□□□ -0.45
Sptan1-204ENSMUST00000113717 NapgQ9CWZ7 312 aa12.25□□□□□ -0.45
Sptan1-204ENSMUST00000113717 Dpf1Q9QX66 387 aa12.25□□□□□ -0.45
Sptan1-204ENSMUST00000113717 Micall1Q8BGT6 870 aa12.25□□□□□ -0.45
Sptan1-204ENSMUST00000113717 Atp2b3Q0VF55 1220 aa12.25□□□□□ -0.45
Sptan1-204ENSMUST00000113717 Ccdc157Q5SPX1 718 aa12.25□□□□□ -0.45
Sptan1-204ENSMUST00000113717 Chmp6P0C0A3 200 aa12.25□□□□□ -0.45
Sptan1-204ENSMUST00000113717 Gnat2P50149 354 aa12.25□□□□□ -0.45
Sptan1-204ENSMUST00000113717 Atp1a2Q6PIE5 1020 aa12.25□□□□□ -0.45
Sptan1-204ENSMUST00000113717 Ak2Q9WTP6 239 aa12.25□□□□□ -0.45
Sptan1-204ENSMUST00000113717 Tti2Q8BGV4 512 aa12.24□□□□□ -0.45
Sptan1-204ENSMUST00000113717 Synpo2Q91YE8 1087 aaKnown RBP12.24□□□□□ -0.45
Sptan1-204ENSMUST00000113717 Ccdc89Q9DA73 370 aa12.24□□□□□ -0.45
Sptan1-204ENSMUST00000113717 Capn12Q9ER56 720 aa12.24□□□□□ -0.45
Sptan1-204ENSMUST00000113717 Zkscan5Q9Z1D8 819 aa12.24□□□□□ -0.45
Sptan1-204ENSMUST00000113717 Ppip5k1A2ARP1 1436 aa12.24□□□□□ -0.45
Sptan1-204ENSMUST00000113717 Speer4f2E9Q366 295 aa12.24□□□□□ -0.45
Sptan1-204ENSMUST00000113717 Ccdc57Q6PHN1 1016 aa12.24□□□□□ -0.45
Sptan1-204ENSMUST00000113717 Depdc1bQ8BH88 529 aa12.24□□□□□ -0.45
Sptan1-204ENSMUST00000113717 Arhgap24Q8C4V1 747 aa12.24□□□□□ -0.45
Sptan1-204ENSMUST00000113717 Plcd3Q8K2J0 785 aa12.24□□□□□ -0.45
Sptan1-204ENSMUST00000113717 Golga5Q9QYE6 729 aa12.24□□□□□ -0.45
Sptan1-204ENSMUST00000113717 Epb41l2O70318 988 aaKnown RBP12.24□□□□□ -0.45
Sptan1-204ENSMUST00000113717 Nbr1P97432 988 aa12.24□□□□□ -0.45
Sptan1-204ENSMUST00000113717 Pdzrn3Q69ZS0 1063 aa12.24□□□□□ -0.45
Sptan1-204ENSMUST00000113717 Snd1Q78PY7 910 aaKnown RBP12.24□□□□□ -0.45
Sptan1-204ENSMUST00000113717 Plcd1Q8R3B1 756 aa12.24□□□□□ -0.45
Sptan1-204ENSMUST00000113717 Kif17Q99PW8 1038 aa12.24□□□□□ -0.45
Sptan1-204ENSMUST00000113717 Mcur1Q9CXD6 340 aa12.24□□□□□ -0.45
Sptan1-204ENSMUST00000113717 Mx2Q9WVP9 655 aa12.24□□□□□ -0.45
Sptan1-204ENSMUST00000113717 Atf7ipQ7TT18 1306 aa12.24□□□□□ -0.45
Sptan1-204ENSMUST00000113717 Gapvd1Q6PAR5 1458 aa12.24□□□□□ -0.45
Sptan1-204ENSMUST00000113717 U2af2P26369 475 aaKnown RBP12.24□□□□□ -0.45
Sptan1-204ENSMUST00000113717 Cers3Q1A3B0 383 aa12.24□□□□□ -0.45
Sptan1-204ENSMUST00000113717 Ints8Q80V86 995 aa12.24□□□□□ -0.45
Sptan1-204ENSMUST00000113717 MthfsQ9D110 203 aa12.24□□□□□ -0.45
Sptan1-204ENSMUST00000113717 Lmbr1lQ9D1E5 489 aa12.24□□□□□ -0.45
Sptan1-204ENSMUST00000113717 Kdm2bQ6P1G2 1309 aa12.24□□□□□ -0.45
Sptan1-204ENSMUST00000113717 Hoxb7P09024 217 aa12.24□□□□□ -0.45
Sptan1-204ENSMUST00000113717 Atp6v0a2P15920 856 aa12.24□□□□□ -0.45
Sptan1-204ENSMUST00000113717 Ccdc14Q8K2J4 934 aa12.24□□□□□ -0.45
Sptan1-204ENSMUST00000113717 AI481877A2ALV5 1481 aa12.23□□□□□ -0.45
Sptan1-204ENSMUST00000113717 Ccdc105Q9D4K7 499 aa12.23□□□□□ -0.45
Sptan1-204ENSMUST00000113717 Trim6Q8BGE7 488 aa12.23□□□□□ -0.45
Sptan1-204ENSMUST00000113717 Maip1Q8BHE8 291 aa12.23□□□□□ -0.45
Sptan1-204ENSMUST00000113717 JmyQ9QXM1 983 aa12.23□□□□□ -0.45
Sptan1-204ENSMUST00000113717 Ncf1Q09014 390 aa12.23□□□□□ -0.45
Sptan1-204ENSMUST00000113717 RestQ8VIG1 1082 aa12.23□□□□□ -0.45
Sptan1-204ENSMUST00000113717 Ankrd35E9Q9D8 996 aa12.23□□□□□ -0.45
Sptan1-204ENSMUST00000113717 Capn2O08529 700 aa12.23□□□□□ -0.45
Sptan1-204ENSMUST00000113717 Eps15P42567 897 aa12.23□□□□□ -0.45
Sptan1-204ENSMUST00000113717 Ddx49Q4FZF3 480 aaKnown RBP12.23□□□□□ -0.45
Sptan1-204ENSMUST00000113717 Ift20Q61025 132 aa12.23□□□□□ -0.45
Retrieved 100 of 22,080 RNA–protein pairs in 14 ms