RNA–Protein interactions for RNA: ENSMUST00000047697.11

Trim17-201, Transcript of E3 ubiquitin-protein ligase TRIM17, mousemouse

TSL 2 BASIC

Gene Trim17, Length 3,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim17-201ENSMUST00000047697 XpcP51612 930 aa11.96□□□□□ -0.49
Trim17-201ENSMUST00000047697 Dnm3Q8BZ98 863 aa11.96□□□□□ -0.49
Trim17-201ENSMUST00000047697 Ptcd1Q8C2E4 695 aaKnown RBP11.96□□□□□ -0.49
Trim17-201ENSMUST00000047697 Tmem119Q8R138 280 aa11.96□□□□□ -0.49
Trim17-201ENSMUST00000047697 Lrrc2Q8VDB8 371 aa11.96□□□□□ -0.49
Trim17-201ENSMUST00000047697 Ktn1Q61595 1327 aaKnown RBP11.96□□□□□ -0.49
Trim17-201ENSMUST00000047697 Dnm1P39053 867 aa11.96□□□□□ -0.5
Trim17-201ENSMUST00000047697 Igfbp6P47880 238 aa11.96□□□□□ -0.5
Trim17-201ENSMUST00000047697 Gng11P61953 73 aa11.96□□□□□ -0.5
Trim17-201ENSMUST00000047697 Hspd1P63038 573 aaKnown RBP11.96□□□□□ -0.5
Trim17-201ENSMUST00000047697 Znf532Q6NXK2 1036 aa11.96□□□□□ -0.5
Trim17-201ENSMUST00000047697 Rad17Q6NXW6 688 aa11.96□□□□□ -0.5
Trim17-201ENSMUST00000047697 Dhx40Q6PE54 779 aaKnown RBP11.96□□□□□ -0.5
Trim17-201ENSMUST00000047697 Ehd2Q8BH64 543 aa11.96□□□□□ -0.5
Trim17-201ENSMUST00000047697 SnrkQ8VDU5 748 aa11.96□□□□□ -0.5
Trim17-201ENSMUST00000047697 Sult6b1P0CC03 303 aa11.96□□□□□ -0.5
Trim17-201ENSMUST00000047697 ThemisQ8BGW0 636 aa11.96□□□□□ -0.5
Trim17-201ENSMUST00000047697 Mb21d2Q8C525 428 aa11.96□□□□□ -0.5
Trim17-201ENSMUST00000047697 Fam76aQ922G2 307 aa11.96□□□□□ -0.5
Trim17-201ENSMUST00000047697 Gtpbp4Q99ME9 634 aaKnown RBP11.96□□□□□ -0.5
Trim17-201ENSMUST00000047697 Ccdc47Q9D024 483 aaKnown RBP11.96□□□□□ -0.5
Trim17-201ENSMUST00000047697 Sil1Q9EPK6 465 aa11.96□□□□□ -0.5
Trim17-201ENSMUST00000047697 Atp12aQ9Z1W8 1035 aa11.96□□□□□ -0.5
Trim17-201ENSMUST00000047697 Actn3O88990 900 aaKnown RBP11.95□□□□□ -0.5
Trim17-201ENSMUST00000047697 Trim56Q80VI1 734 aaKnown RBP11.95□□□□□ -0.5
Trim17-201ENSMUST00000047697 Mei4Q8BRM6 389 aa11.95□□□□□ -0.5
Trim17-201ENSMUST00000047697 DymQ8CHY3 669 aa11.95□□□□□ -0.5
Trim17-201ENSMUST00000047697 Diaph1O08808 1255 aa11.95□□□□□ -0.5
Trim17-201ENSMUST00000047697 Ankle2Q6P1H6 964 aa11.95□□□□□ -0.5
Trim17-201ENSMUST00000047697 Fez2Q6TYB5 348 aa11.95□□□□□ -0.5
Trim17-201ENSMUST00000047697 Tmem132aQ922P8 1018 aa11.95□□□□□ -0.5
Trim17-201ENSMUST00000047697 Kdm6aO70546 1401 aa11.95□□□□□ -0.5
Trim17-201ENSMUST00000047697 Prl3d3A0A0M6L0J6 224 aa11.95□□□□□ -0.5
Trim17-201ENSMUST00000047697 Nfatc2ipO09130 412 aa11.95□□□□□ -0.5
Trim17-201ENSMUST00000047697 Flad1Q8R123 492 aa11.95□□□□□ -0.5
Trim17-201ENSMUST00000047697 Nop2Q922K7 793 aaKnown RBP11.95□□□□□ -0.5
Trim17-201ENSMUST00000047697 Ankrd1Q9CR42 319 aa11.95□□□□□ -0.5
Trim17-201ENSMUST00000047697 Mrvi1Q9WUX5 899 aaKnown RBP11.95□□□□□ -0.5
Trim17-201ENSMUST00000047697 Myd88P22366 296 aa11.94□□□□□ -0.5
Trim17-201ENSMUST00000047697 Nbr1P97432 988 aa11.94□□□□□ -0.5
Trim17-201ENSMUST00000047697 Prdm1Q60636 856 aa11.94□□□□□ -0.5
Trim17-201ENSMUST00000047697 ImmtQ8CAQ8 757 aaKnown RBP11.94□□□□□ -0.5
Trim17-201ENSMUST00000047697 Cul9Q80TT8 1865 aa11.94□□□□□ -0.5
Trim17-201ENSMUST00000047697 Flt4P35917 1363 aa11.94□□□□□ -0.5
Trim17-201ENSMUST00000047697 Kif2aP28740 705 aa11.94□□□□□ -0.5
Trim17-201ENSMUST00000047697 Ano8Q6PB70 1060 aa11.94□□□□□ -0.5
Trim17-201ENSMUST00000047697 Stac3Q8BZ71 360 aa11.94□□□□□ -0.5
Trim17-201ENSMUST00000047697 CoblQ5NBX1 1337 aaKnown RBP11.94□□□□□ -0.5
Trim17-201ENSMUST00000047697 Pfkfb1P70266 471 aa11.93□□□□□ -0.5
Trim17-201ENSMUST00000047697 Znhit6Q3UFB2 460 aaKnown RBP11.93□□□□□ -0.5
Trim17-201ENSMUST00000047697 Abcf1Q6P542 837 aaKnown RBP11.93□□□□□ -0.5
Trim17-201ENSMUST00000047697 Klhl30Q8C3F7 581 aa11.93□□□□□ -0.5
Trim17-201ENSMUST00000047697 OptnQ8K3K8 584 aa11.93□□□□□ -0.5
Trim17-201ENSMUST00000047697 InsrrQ9WTL4 1300 aa11.93□□□□□ -0.5
Trim17-201ENSMUST00000047697 Slc1a4O35874 532 aa11.93□□□□□ -0.5
Trim17-201ENSMUST00000047697 Ppp4r3aQ6P2K6 820 aa11.93□□□□□ -0.5
Trim17-201ENSMUST00000047697 Trak2Q6P9N8 913 aa11.93□□□□□ -0.5
Trim17-201ENSMUST00000047697 MlecQ6ZQI3 291 aaKnown RBP11.93□□□□□ -0.5
Trim17-201ENSMUST00000047697 Usp44Q8C2S0 711 aa11.93□□□□□ -0.5
Trim17-201ENSMUST00000047697 Rreb1Q3UH06 1700 aaKnown RBP11.93□□□□□ -0.5
Trim17-201ENSMUST00000047697 Metap2O08663 478 aaKnown RBP11.93□□□□□ -0.5
Trim17-201ENSMUST00000047697 CrcpO35427 148 aa11.93□□□□□ -0.5
Trim17-201ENSMUST00000047697 Dapk3O54784 448 aa11.93□□□□□ -0.5
Trim17-201ENSMUST00000047697 Surf1P09925 306 aa11.93□□□□□ -0.5
Trim17-201ENSMUST00000047697 Ankrd40Q5SUE8 363 aa11.93□□□□□ -0.5
Trim17-201ENSMUST00000047697 Agtpbp1Q641K1 1218 aa11.93□□□□□ -0.5
Trim17-201ENSMUST00000047697 Ppp1r37Q8BKR5 712 aa11.93□□□□□ -0.5
Trim17-201ENSMUST00000047697 Ncaph2Q8BSP2 607 aa11.93□□□□□ -0.5
Trim17-201ENSMUST00000047697 Cnot6lQ8VEG6 555 aa11.93□□□□□ -0.5
Trim17-201ENSMUST00000047697 SelenooQ9DBC0 667 aa11.93□□□□□ -0.5
Trim17-201ENSMUST00000047697 Tnrc6bQ8BKI2 1810 aaKnown RBP11.93□□□□□ -0.5
Trim17-201ENSMUST00000047697 Abcc12Q80WJ6 1366 aa11.93□□□□□ -0.5
Trim17-201ENSMUST00000047697 ItpripQ3TNL8 555 aa11.92□□□□□ -0.5
Trim17-201ENSMUST00000047697 Panx2Q6IMP4 677 aa11.92□□□□□ -0.5
Trim17-201ENSMUST00000047697 Slc5a1Q8C3K6 665 aa11.92□□□□□ -0.5
Trim17-201ENSMUST00000047697 Naa16Q9DBB4 864 aa11.92□□□□□ -0.5
Trim17-201ENSMUST00000047697 Cwc25Q9DBF7 416 aa11.92□□□□□ -0.5
Trim17-201ENSMUST00000047697 Abcb6Q9DC29 842 aa11.92□□□□□ -0.5
Trim17-201ENSMUST00000047697 Magi2Q9WVQ1 1275 aa11.92□□□□□ -0.5
Trim17-201ENSMUST00000047697 Itsn1Q9Z0R4 1714 aa11.92□□□□□ -0.5
Trim17-201ENSMUST00000047697 TnksQ6PFX9 1320 aa11.92□□□□□ -0.5
Trim17-201ENSMUST00000047697 Anks1aP59672 1150 aa11.92□□□□□ -0.5
Trim17-201ENSMUST00000047697 Smarcc2Q6PDG5 1213 aa11.92□□□□□ -0.5
Trim17-201ENSMUST00000047697 Efcab2Q9CQ46 164 aa11.92□□□□□ -0.5
Trim17-201ENSMUST00000047697 Phkg2Q9DB30 406 aa11.92□□□□□ -0.5
Trim17-201ENSMUST00000047697 Lonp2Q9DBN5 852 aa11.92□□□□□ -0.5
Trim17-201ENSMUST00000047697 Gm21680A0A0G2JGR8 267 aa11.92□□□□□ -0.5
Trim17-201ENSMUST00000047697 Myl10Q62082 202 aa11.92□□□□□ -0.5
Trim17-201ENSMUST00000047697 Etf1Q8BWY3 437 aaKnown RBP11.92□□□□□ -0.5
Trim17-201ENSMUST00000047697 Evc2Q8K1G2 1220 aa11.92□□□□□ -0.5
Trim17-201ENSMUST00000047697 A0A1L1SQF0 893 aa11.91□□□□□ -0.5
Trim17-201ENSMUST00000047697 Hspa4Q61316 841 aa11.91□□□□□ -0.5
Trim17-201ENSMUST00000047697 Arl8aQ8VEH3 186 aa11.91□□□□□ -0.5
Trim17-201ENSMUST00000047697 Acsbg1Q99PU5 721 aa11.91□□□□□ -0.5
Trim17-201ENSMUST00000047697 MicalclQ9D5U9 680 aa11.91□□□□□ -0.5
Trim17-201ENSMUST00000047697 Abcc10Q8R4P9 1501 aa11.91□□□□□ -0.5
Trim17-201ENSMUST00000047697 Ccdc121E9Q6D3 323 aa11.91□□□□□ -0.5
Trim17-201ENSMUST00000047697 Nlrp9bQ66X22 1003 aa11.91□□□□□ -0.5
Trim17-201ENSMUST00000047697 Sec62Q8BU14 398 aaKnown RBP11.91□□□□□ -0.5
Trim17-201ENSMUST00000047697 Kcnq3Q8K3F6 873 aa11.91□□□□□ -0.5
Retrieved 100 of 22,080 RNA–protein pairs in 10.2 ms