RNA–Protein interactions for RNA: ENST00000638009.1

CACNA1A-257, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,665 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-257ENST00000638009 CPEB2Q7Z5Q1 589 aaKnown RBP17.64■□□□□ 0.41
CACNA1A-257ENST00000638009 GPR137Q96N19 417 aa17.64■□□□□ 0.41
CACNA1A-257ENST00000638009 ZNF426Q9BUY5 554 aa17.64■□□□□ 0.41
CACNA1A-257ENST00000638009 NXF2Q9GZY0 626 aaKnown RBP17.64■□□□□ 0.41
CACNA1A-257ENST00000638009 ZNF346Q9UL40 294 aaKnown RBP17.64■□□□□ 0.41
CACNA1A-257ENST00000638009 MEIKINA0A087WXM9 373 aa17.64■□□□□ 0.41
CACNA1A-257ENST00000638009 ZXDBP98169 803 aa17.64■□□□□ 0.41
CACNA1A-257ENST00000638009 FAM71CQ8NEG0 241 aa17.64■□□□□ 0.41
CACNA1A-257ENST00000638009 DTD2Q96FN9 168 aa17.64■□□□□ 0.41
CACNA1A-257ENST00000638009 TEAD3Q99594 435 aa17.64■□□□□ 0.41
CACNA1A-257ENST00000638009 MED20Q9H944 212 aa17.64■□□□□ 0.41
CACNA1A-257ENST00000638009 ADGRL4Q9HBW9 690 aa17.64■□□□□ 0.41
CACNA1A-257ENST00000638009 ZFP30Q9Y2G7 519 aa17.64■□□□□ 0.41
CACNA1A-257ENST00000638009 COL14A1Q05707 1796 aaKnown RBP17.64■□□□□ 0.41
CACNA1A-257ENST00000638009 FAM189BP81408 668 aa17.64■□□□□ 0.41
CACNA1A-257ENST00000638009 FOXK2Q01167 660 aa17.64■□□□□ 0.41
CACNA1A-257ENST00000638009 RUNX3Q13761 415 aa17.64■□□□□ 0.41
CACNA1A-257ENST00000638009 VRK2Q86Y07 508 aa17.64■□□□□ 0.41
CACNA1A-257ENST00000638009 WDR31Q8NA23 367 aa17.64■□□□□ 0.41
CACNA1A-257ENST00000638009 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.64■□□□□ 0.41
CACNA1A-257ENST00000638009 TMED3Q9Y3Q3 217 aa17.64■□□□□ 0.41
CACNA1A-257ENST00000638009 A0A1W2PNV4 684 aa17.63■□□□□ 0.41
CACNA1A-257ENST00000638009 PRSS38A1L453 326 aa17.63■□□□□ 0.41
CACNA1A-257ENST00000638009 P2RY10O00398 339 aa17.63■□□□□ 0.41
CACNA1A-257ENST00000638009 MELTFP08582 738 aa17.63■□□□□ 0.41
CACNA1A-257ENST00000638009 CD82P27701 267 aa17.63■□□□□ 0.41
CACNA1A-257ENST00000638009 AMMECR1Q9Y4X0 333 aaPredicted RBP17.63■□□□□ 0.41
CACNA1A-257ENST00000638009 FAM74A7A6NL05 159 aa17.63■□□□□ 0.41
CACNA1A-257ENST00000638009 PLP1P60201 277 aa17.63■□□□□ 0.41
CACNA1A-257ENST00000638009 CELF2-AS1Q8N7Q2 184 aa17.63■□□□□ 0.41
CACNA1A-257ENST00000638009 QDPRP09417 244 aa17.63■□□□□ 0.41
CACNA1A-257ENST00000638009 OR5R1Q8NH85 324 aa17.63■□□□□ 0.41
CACNA1A-257ENST00000638009 FAM210BQ96KR6 192 aa17.63■□□□□ 0.41
CACNA1A-257ENST00000638009 IGSF23A1L1A6 192 aa17.63■□□□□ 0.41
CACNA1A-257ENST00000638009 CCSO14618 274 aa17.63■□□□□ 0.41
CACNA1A-257ENST00000638009 EDN1P05305 212 aa17.63■□□□□ 0.41
CACNA1A-257ENST00000638009 TBXA2RP21731 343 aa17.63■□□□□ 0.41
CACNA1A-257ENST00000638009 GLRA1P23415 457 aa17.63■□□□□ 0.41
CACNA1A-257ENST00000638009 EXOSC7Q15024 291 aaKnown RBP17.63■□□□□ 0.41
CACNA1A-257ENST00000638009 EXD3Q8N9H8 876 aa17.63■□□□□ 0.41
CACNA1A-257ENST00000638009 TMEM9BQ9NQ34 198 aa17.63■□□□□ 0.41
CACNA1A-257ENST00000638009 ZNF391Q9UJN7 358 aa17.63■□□□□ 0.41
CACNA1A-257ENST00000638009 VMA21Q3ZAQ7 101 aa17.63■□□□□ 0.41
CACNA1A-257ENST00000638009 SORBS1Q9BX66 1292 aaKnown RBP17.63■□□□□ 0.41
CACNA1A-257ENST00000638009 CSNK1G1Q9HCP0 422 aa17.63■□□□□ 0.41
CACNA1A-257ENST00000638009 F7P08709 466 aaPredicted RBP17.63■□□□□ 0.41
CACNA1A-257ENST00000638009 SHC1P29353 583 aa17.63■□□□□ 0.41
CACNA1A-257ENST00000638009 OR6S1Q8NH40 331 aa17.63■□□□□ 0.41
CACNA1A-257ENST00000638009 C19orf43Q9BQ61 176 aa17.63■□□□□ 0.41
CACNA1A-257ENST00000638009 UBTD1Q9HAC8 227 aa17.63■□□□□ 0.41
CACNA1A-257ENST00000638009 TMEM131LA2VDJ0 1609 aa17.62■□□□□ 0.41
CACNA1A-257ENST00000638009 JUNBP17275 347 aaPredicted RBP17.62■□□□□ 0.41
CACNA1A-257ENST00000638009 SH2D2AQ9NP31 389 aa17.62■□□□□ 0.41
CACNA1A-257ENST00000638009 CACNG4Q9UBN1 327 aa17.62■□□□□ 0.41
CACNA1A-257ENST00000638009 ZBTB25P24278 435 aa17.62■□□□□ 0.41
CACNA1A-257ENST00000638009 IL21Q9HBE4 155 aa17.62■□□□□ 0.41
CACNA1A-257ENST00000638009 RHBDL1O75783 438 aa17.62■□□□□ 0.41
CACNA1A-257ENST00000638009 HIST1H1CP16403 213 aaKnown RBP17.62■□□□□ 0.41
CACNA1A-257ENST00000638009 CLEC4DQ8WXI8 215 aa17.62■□□□□ 0.41
CACNA1A-257ENST00000638009 PXDNQ92626 1479 aa17.62■□□□□ 0.41
CACNA1A-257ENST00000638009 NQO2P16083 231 aa17.62■□□□□ 0.41
CACNA1A-257ENST00000638009 APOOQ9BUR5 198 aa17.62■□□□□ 0.41
CACNA1A-257ENST00000638009 POMT2Q9UKY4 750 aa17.62■□□□□ 0.41
CACNA1A-257ENST00000638009 TIMM10BQ9Y5J6 103 aa17.62■□□□□ 0.41
CACNA1A-257ENST00000638009 GABRB1P18505 474 aa17.62■□□□□ 0.41
CACNA1A-257ENST00000638009 P2RY2P41231 377 aa17.62■□□□□ 0.41
CACNA1A-257ENST00000638009 MEOX2P50222 304 aa17.62■□□□□ 0.41
CACNA1A-257ENST00000638009 CLDN20P56880 219 aa17.62■□□□□ 0.41
CACNA1A-257ENST00000638009 ZDHHC16Q969W1 377 aa17.62■□□□□ 0.41
CACNA1A-257ENST00000638009 HSD3B7Q9H2F3 369 aa17.62■□□□□ 0.41
CACNA1A-257ENST00000638009 STARD5Q9NSY2 213 aa17.62■□□□□ 0.41
CACNA1A-257ENST00000638009 MED13Q9UHV7 2174 aa17.62■□□□□ 0.41
CACNA1A-257ENST00000638009 GPR85P60893 370 aa17.62■□□□□ 0.41
CACNA1A-257ENST00000638009 CTBSQ01459 385 aa17.62■□□□□ 0.41
CACNA1A-257ENST00000638009 C19orf47Q8N9M1 422 aaKnown RBP17.62■□□□□ 0.41
CACNA1A-257ENST00000638009 MMP24Q9Y5R2 645 aa17.62■□□□□ 0.41
CACNA1A-257ENST00000638009 GHRHP01286 108 aa17.61■□□□□ 0.41
CACNA1A-257ENST00000638009 DEFB110Q30KQ9 67 aa17.61■□□□□ 0.41
CACNA1A-257ENST00000638009 SLC5A6Q9Y289 635 aa17.61■□□□□ 0.41
CACNA1A-257ENST00000638009 SCN10AQ9Y5Y9 1956 aa17.61■□□□□ 0.41
CACNA1A-257ENST00000638009 HOXC11O43248 304 aaPredicted RBP17.61■□□□□ 0.41
CACNA1A-257ENST00000638009 RHBDD1Q8TEB9 315 aa17.61■□□□□ 0.41
CACNA1A-257ENST00000638009 LANCL2Q9NS86 450 aa17.61■□□□□ 0.41
CACNA1A-257ENST00000638009 PGGT1BP53609 377 aa17.61■□□□□ 0.41
CACNA1A-257ENST00000638009 C11orf91Q3C1V1 193 aa17.61■□□□□ 0.41
CACNA1A-257ENST00000638009 ARRDC1Q8N5I2 433 aa17.61■□□□□ 0.41
CACNA1A-257ENST00000638009 RTN4IP1Q8WWV3 396 aaPredicted RBP17.61■□□□□ 0.41
CACNA1A-257ENST00000638009 CHST8Q9H2A9 424 aa17.61■□□□□ 0.41
CACNA1A-257ENST00000638009 MFNGO00587 321 aa17.61■□□□□ 0.41
CACNA1A-257ENST00000638009 SCRG1O75711 98 aa17.61■□□□□ 0.41
CACNA1A-257ENST00000638009 OR1D5P58170 312 aa17.61■□□□□ 0.41
CACNA1A-257ENST00000638009 PDLIM5Q96HC4 596 aaKnown RBP17.61■□□□□ 0.41
CACNA1A-257ENST00000638009 GPA33Q99795 319 aa17.61■□□□□ 0.41
CACNA1A-257ENST00000638009 MROH1Q8NDA8 1641 aa17.61■□□□□ 0.41
CACNA1A-257ENST00000638009 OPRK1P41145 380 aa17.61■□□□□ 0.41
CACNA1A-257ENST00000638009 TMEM65Q6PI78 240 aa17.61■□□□□ 0.41
CACNA1A-257ENST00000638009 OR5AS1Q8N127 324 aa17.61■□□□□ 0.41
CACNA1A-257ENST00000638009 SLC25A5P05141 298 aaKnown RBP17.61■□□□□ 0.41
CACNA1A-257ENST00000638009 GUSBP08236 651 aa17.61■□□□□ 0.41
CACNA1A-257ENST00000638009 ACRP10323 421 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms