RNA–Protein interactions for RNA: ENST00000635675.2

LINC00339-210, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,404 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-210ENST00000635675 OR8B8Q15620 311 aa8.24□□□□□ -1.09
LINC00339-210ENST00000635675 SMN1Q16637 294 aaKnown RBP8.24□□□□□ -1.09
LINC00339-210ENST00000635675 HFEQ30201 348 aa8.24□□□□□ -1.09
LINC00339-210ENST00000635675 ZNF829Q3KNS6 432 aaPredicted RBP8.24□□□□□ -1.09
LINC00339-210ENST00000635675 LCE2DQ5TA82 110 aaPredicted RBP8.24□□□□□ -1.09
LINC00339-210ENST00000635675 PLEKHG7Q6ZR37 379 aa8.24□□□□□ -1.09
LINC00339-210ENST00000635675 BIVMQ86UB2 503 aa8.24□□□□□ -1.09
LINC00339-210ENST00000635675 ACBD7Q8N6N7 88 aa8.24□□□□□ -1.09
LINC00339-210ENST00000635675 OR10AD1Q8NGE0 317 aa8.24□□□□□ -1.09
LINC00339-210ENST00000635675 OR56B2PQ8NGI1 322 aa8.24□□□□□ -1.09
LINC00339-210ENST00000635675 ITLN1Q8WWA0 313 aa8.24□□□□□ -1.09
LINC00339-210ENST00000635675 PPP1R14AQ96A00 147 aa8.24□□□□□ -1.09
LINC00339-210ENST00000635675 LYZL4Q96KX0 146 aa8.24□□□□□ -1.09
LINC00339-210ENST00000635675 OR2V2Q96R30 315 aa8.24□□□□□ -1.09
LINC00339-210ENST00000635675 SIGLEC11Q96RL6 698 aa8.24□□□□□ -1.09
LINC00339-210ENST00000635675 PBOV1Q9GZY1 135 aa8.24□□□□□ -1.09
LINC00339-210ENST00000635675 SLC22A4Q9H015 551 aa8.24□□□□□ -1.09
LINC00339-210ENST00000635675 GSX1Q9H4S2 264 aaPredicted RBP8.24□□□□□ -1.09
LINC00339-210ENST00000635675 G6PC2Q9NQR9 355 aa8.24□□□□□ -1.09
LINC00339-210ENST00000635675 MRPL15Q9P015 296 aaKnown RBP8.24□□□□□ -1.09
LINC00339-210ENST00000635675 NUFIP1Q9UHK0 495 aaKnown RBP8.24□□□□□ -1.09
LINC00339-210ENST00000635675 ZNF391Q9UJN7 358 aa8.24□□□□□ -1.09
LINC00339-210ENST00000635675 RPL36Q9Y3U8 105 aaKnown RBP8.24□□□□□ -1.09
LINC00339-210ENST00000635675 PCDHGB1Q9Y5G3 927 aa8.24□□□□□ -1.09
LINC00339-210ENST00000635675 R4GMQ9 66 aa8.24□□□□□ -1.09
LINC00339-210ENST00000635675 DYSFO75923 2080 aa8.24□□□□□ -1.09
LINC00339-210ENST00000635675 TLN2Q9Y4G6 2542 aa8.23□□□□□ -1.09
LINC00339-210ENST00000635675 IGHV4-61A0A0C4DH41 118 aa8.23□□□□□ -1.09
LINC00339-210ENST00000635675 DAPL1A0PJW8 107 aa8.23□□□□□ -1.09
LINC00339-210ENST00000635675 MAGEA13PA6NCF6 341 aa8.23□□□□□ -1.09
LINC00339-210ENST00000635675 XPNPEP2O43895 674 aa8.23□□□□□ -1.09
LINC00339-210ENST00000635675 GMDSO60547 372 aa8.23□□□□□ -1.09
LINC00339-210ENST00000635675 FADS2O95864 444 aaKnown RBP8.23□□□□□ -1.09
LINC00339-210ENST00000635675 LY6G6DO95868 133 aa8.23□□□□□ -1.09
LINC00339-210ENST00000635675 TTRP02766 147 aa8.23□□□□□ -1.09
LINC00339-210ENST00000635675 ATP6V1B1P15313 513 aa8.23□□□□□ -1.09
LINC00339-210ENST00000635675 TNFRSF1AP19438 455 aa8.23□□□□□ -1.09
LINC00339-210ENST00000635675 EEF1B2P24534 225 aaKnown RBP8.23□□□□□ -1.09
LINC00339-210ENST00000635675 KRTAP1-1Q07627 177 aa8.23□□□□□ -1.09
LINC00339-210ENST00000635675 RAB40BQ12829 278 aa8.23□□□□□ -1.09
LINC00339-210ENST00000635675 MAB21L1Q13394 359 aa8.23□□□□□ -1.09
LINC00339-210ENST00000635675 GFOD2Q3B7J2 385 aa8.23□□□□□ -1.09
LINC00339-210ENST00000635675 LIPNQ5VXI9 398 aa8.23□□□□□ -1.09
LINC00339-210ENST00000635675 KCTD20Q7Z5Y7 419 aa8.23□□□□□ -1.09
LINC00339-210ENST00000635675 KLBQ86Z14 1044 aa8.23□□□□□ -1.09
LINC00339-210ENST00000635675 ELMOD2Q8IZ81 293 aa8.23□□□□□ -1.09
LINC00339-210ENST00000635675 CELF2-AS1Q8N7Q2 184 aa8.23□□□□□ -1.09
LINC00339-210ENST00000635675 YIPF7Q8N8F6 280 aa8.23□□□□□ -1.09
LINC00339-210ENST00000635675 CCL17Q92583 94 aa8.23□□□□□ -1.09
LINC00339-210ENST00000635675 SGCDQ92629 289 aa8.23□□□□□ -1.09
LINC00339-210ENST00000635675 ITFG2Q969R8 447 aa8.23□□□□□ -1.09
LINC00339-210ENST00000635675 RNF166Q96A37 237 aaPredicted RBP8.23□□□□□ -1.09
LINC00339-210ENST00000635675 MEGF10Q96KG7 1140 aa8.23□□□□□ -1.09
LINC00339-210ENST00000635675 NR1H4Q96RI1 486 aaPredicted RBP8.23□□□□□ -1.09
LINC00339-210ENST00000635675 ZNF649Q9BS31 505 aa8.23□□□□□ -1.09
LINC00339-210ENST00000635675 SOX7Q9BT81 388 aa8.23□□□□□ -1.09
LINC00339-210ENST00000635675 GCM1Q9NP62 436 aa8.23□□□□□ -1.09
LINC00339-210ENST00000635675 OR52A1Q9UKL2 312 aa8.23□□□□□ -1.09
LINC00339-210ENST00000635675 MYRFQ9Y2G1 1151 aa8.23□□□□□ -1.09
LINC00339-210ENST00000635675 HSPE1-MOB4S4R3N1 261 aa8.23□□□□□ -1.09
LINC00339-210ENST00000635675 TANC2Q9HCD6 1990 aa8.23□□□□□ -1.09
LINC00339-210ENST00000635675 ABCA1O95477 2261 aa8.23□□□□□ -1.09
LINC00339-210ENST00000635675 LOC110117498-PIK3R3F6TDL0 507 aa8.22□□□□□ -1.09
LINC00339-210ENST00000635675 SLC1A7O00341 560 aa8.22□□□□□ -1.09
LINC00339-210ENST00000635675 PPIHO43447 177 aaKnown RBP8.22□□□□□ -1.09
LINC00339-210ENST00000635675 RPP14O95059 124 aaKnown RBP8.22□□□□□ -1.09
LINC00339-210ENST00000635675 TNFAIP8O95379 198 aa8.22□□□□□ -1.09
LINC00339-210ENST00000635675 PTBP3O95758 552 aaKnown RBP8.22□□□□□ -1.09
LINC00339-210ENST00000635675 IGHA1P01876 353 aa8.22□□□□□ -1.09
LINC00339-210ENST00000635675 ACKR3P25106 362 aa8.22□□□□□ -1.09
LINC00339-210ENST00000635675 GATA4P43694 442 aa8.22□□□□□ -1.09
LINC00339-210ENST00000635675 GPR6P46095 362 aaPredicted RBP8.22□□□□□ -1.09
LINC00339-210ENST00000635675 SRP9P49458 86 aaKnown RBP8.22□□□□□ -1.09
LINC00339-210ENST00000635675 HNRNPA0Q13151 305 aaKnown RBP8.22□□□□□ -1.09
LINC00339-210ENST00000635675 CDONQ4KMG0 1287 aa8.22□□□□□ -1.09
LINC00339-210ENST00000635675 TP53I3Q53FA7 332 aa8.22□□□□□ -1.09
LINC00339-210ENST00000635675 KLHL22Q53GT1 634 aa8.22□□□□□ -1.09
LINC00339-210ENST00000635675 C6orf141Q5SZD1 244 aa8.22□□□□□ -1.09
LINC00339-210ENST00000635675 LAIR2Q6ISS4 152 aa8.22□□□□□ -1.09
LINC00339-210ENST00000635675 KRT74Q7RTS7 529 aa8.22□□□□□ -1.09
LINC00339-210ENST00000635675 EGFL6Q8IUX8 553 aa8.22□□□□□ -1.09
LINC00339-210ENST00000635675 PLPP7Q8NBV4 271 aa8.22□□□□□ -1.09
LINC00339-210ENST00000635675 CSNK2A3Q8NEV1 391 aa8.22□□□□□ -1.09
LINC00339-210ENST00000635675 OR52I1Q8NGK6 324 aa8.22□□□□□ -1.09
LINC00339-210ENST00000635675 OR51E1Q8TCB6 317 aa8.22□□□□□ -1.09
LINC00339-210ENST00000635675 FBLIM1Q8WUP2 373 aa8.22□□□□□ -1.09
LINC00339-210ENST00000635675 RORBQ92753 470 aa8.22□□□□□ -1.09
LINC00339-210ENST00000635675 MOB1AQ9H8S9 216 aa8.22□□□□□ -1.09
LINC00339-210ENST00000635675 TMEM106BQ9NUM4 274 aa8.22□□□□□ -1.09
LINC00339-210ENST00000635675 DCAF16Q9NXF7 216 aa8.22□□□□□ -1.09
LINC00339-210ENST00000635675 TREM2Q9NZC2 230 aa8.22□□□□□ -1.09
LINC00339-210ENST00000635675 PPP1R3CQ9UQK1 317 aa8.22□□□□□ -1.09
LINC00339-210ENST00000635675 NOP16Q9Y3C1 178 aaKnown RBP8.22□□□□□ -1.09
LINC00339-210ENST00000635675 RHBDD3Q9Y3P4 386 aa8.22□□□□□ -1.09
LINC00339-210ENST00000635675 SNX5Q9Y5X3 404 aa8.22□□□□□ -1.09
LINC00339-210ENST00000635675 IGHV3-64DA0A0J9YX35 117 aa8.21□□□□□ -1.09
LINC00339-210ENST00000635675 LOC100289279A0A1B0GTE1 492 aa8.21□□□□□ -1.09
LINC00339-210ENST00000635675 A0A1B0GTI1 187 aa8.21□□□□□ -1.09
LINC00339-210ENST00000635675 LRP5LA4QPB2 252 aa8.21□□□□□ -1.09
LINC00339-210ENST00000635675 ANKRD30BLA7E2S9 258 aa8.21□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms