RNA–Protein interactions for RNA: ENST00000627440.2

SNAP23-223, Transcript of synaptosome associated protein 23, human

TSL 5 BASIC

Gene SNAP23, Length 210 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNAP23-223	ENST00000627440	TMEM54	Q969K7	222 aa		4.42	□□□□□ -1.7
SNAP23-223	ENST00000627440	OR2H1	Q9GZK4	316 aa		4.42	□□□□□ -1.7
SNAP23-223	ENST00000627440	ABCG5	Q9H222	651 aa		4.42	□□□□□ -1.7
SNAP23-223	ENST00000627440	SDF2L1	Q9HCN8	221 aa		4.42	□□□□□ -1.7
SNAP23-223	ENST00000627440	SLCO1B3	Q9NPD5	702 aa		4.42	□□□□□ -1.7
SNAP23-223	ENST00000627440	SNTG1	Q9NSN8	517 aa		4.42	□□□□□ -1.7
SNAP23-223	ENST00000627440	KCNE5	Q9UJ90	142 aa		4.42	□□□□□ -1.7
SNAP23-223	ENST00000627440	RPS6KA6	Q9UK32	745 aa		4.42	□□□□□ -1.7
SNAP23-223	ENST00000627440	RNF11	Q9Y3C5	154 aa		4.42	□□□□□ -1.7
SNAP23-223	ENST00000627440	ZCWPW2	A0A1B0GU75	182 aa		4.41	□□□□□ -1.7
SNAP23-223	ENST00000627440	TMEM238L	A0A1B0GVL6	79 aa		4.41	□□□□□ -1.7
SNAP23-223	ENST00000627440	UGT2B17	O75795	530 aa		4.41	□□□□□ -1.7
SNAP23-223	ENST00000627440	SERPINI2	O75830	405 aa		4.41	□□□□□ -1.7
SNAP23-223	ENST00000627440	DNAJC8	O75937	253 aa	Predicted RBP	4.41	□□□□□ -1.7
SNAP23-223	ENST00000627440	SERPINA1	P01009	418 aa		4.41	□□□□□ -1.7
SNAP23-223	ENST00000627440	IGHV3-11	P01762	117 aa		4.41	□□□□□ -1.7
SNAP23-223	ENST00000627440	TFF1	P04155	84 aa		4.41	□□□□□ -1.7
SNAP23-223	ENST00000627440	SCT	P09683	121 aa		4.41	□□□□□ -1.7
SNAP23-223	ENST00000627440	PGAM1	P18669	254 aa		4.41	□□□□□ -1.7
SNAP23-223	ENST00000627440	GABRB3	P28472	473 aa		4.41	□□□□□ -1.7
SNAP23-223	ENST00000627440	MECP2	P51608	486 aa	Known RBP	4.41	□□□□□ -1.7
SNAP23-223	ENST00000627440	SYNJ2BP	P57105	145 aa		4.41	□□□□□ -1.7
SNAP23-223	ENST00000627440	ACTA2	P62736	377 aa		4.41	□□□□□ -1.7
SNAP23-223	ENST00000627440	ACTG2	P63267	376 aa		4.41	□□□□□ -1.7
SNAP23-223	ENST00000627440	ACTC1	P68032	377 aa		4.41	□□□□□ -1.7
SNAP23-223	ENST00000627440	ACTA1	P68133	377 aa		4.41	□□□□□ -1.7
SNAP23-223	ENST00000627440	ZNF460	Q14592	562 aa		4.41	□□□□□ -1.7
SNAP23-223	ENST00000627440	ZNF273	Q14593	569 aa		4.41	□□□□□ -1.7
SNAP23-223	ENST00000627440	CDK5R1	Q15078	307 aa		4.41	□□□□□ -1.7
SNAP23-223	ENST00000627440	SGO1	Q5FBB7	561 aa		4.41	□□□□□ -1.7
SNAP23-223	ENST00000627440	ACSM2B	Q68CK6	577 aa		4.41	□□□□□ -1.7
SNAP23-223	ENST00000627440	LIN54	Q6MZP7	749 aa		4.41	□□□□□ -1.7
SNAP23-223	ENST00000627440	H1FNT	Q75WM6	255 aa	Predicted RBP	4.41	□□□□□ -1.7
SNAP23-223	ENST00000627440	TSPYL5	Q86VY4	417 aa	Predicted RBP	4.41	□□□□□ -1.7
SNAP23-223	ENST00000627440	DPP10	Q8N608	796 aa		4.41	□□□□□ -1.7
SNAP23-223	ENST00000627440	OR4P4	Q8NGL7	312 aa		4.41	□□□□□ -1.7
SNAP23-223	ENST00000627440	RHEBL1	Q8TAI7	183 aa		4.41	□□□□□ -1.7
SNAP23-223	ENST00000627440	C16orf78	Q8WTQ4	265 aa		4.41	□□□□□ -1.7
SNAP23-223	ENST00000627440	TAAR8	Q969N4	342 aa		4.41	□□□□□ -1.7
SNAP23-223	ENST00000627440	PPP1R14B	Q96C90	147 aa		4.41	□□□□□ -1.7
SNAP23-223	ENST00000627440	RASD2	Q96D21	266 aa		4.41	□□□□□ -1.7
SNAP23-223	ENST00000627440	FAM210B	Q96KR6	192 aa		4.41	□□□□□ -1.7
SNAP23-223	ENST00000627440	ADAT1	Q9BUB4	502 aa	Known RBP	4.41	□□□□□ -1.7
SNAP23-223	ENST00000627440	OSBPL8	Q9BZF1	889 aa		4.41	□□□□□ -1.7
SNAP23-223	ENST00000627440	GOLPH3	Q9H4A6	298 aa		4.41	□□□□□ -1.7
SNAP23-223	ENST00000627440	NMRK1	Q9NWW6	199 aa		4.41	□□□□□ -1.7
SNAP23-223	ENST00000627440	SLAMF8	Q9P0V8	285 aa		4.41	□□□□□ -1.7
SNAP23-223	ENST00000627440	MRM2	Q9UI43	246 aa	Known RBP	4.41	□□□□□ -1.7
SNAP23-223	ENST00000627440	SIGLEC7	Q9Y286	467 aa		4.41	□□□□□ -1.7
SNAP23-223	ENST00000627440		A0A087X0T9	212 aa		4.4	□□□□□ -1.71
SNAP23-223	ENST00000627440		A0A096LPI6	279 aa		4.4	□□□□□ -1.71
SNAP23-223	ENST00000627440	IGHV2-26	A0A0B4J1V2	119 aa		4.4	□□□□□ -1.71
SNAP23-223	ENST00000627440	DBX1	A6NMT0	343 aa		4.4	□□□□□ -1.71
SNAP23-223	ENST00000627440	C17orf98	A8MV24	154 aa		4.4	□□□□□ -1.71
SNAP23-223	ENST00000627440	HPR	P00739	348 aa		4.4	□□□□□ -1.71
SNAP23-223	ENST00000627440	FAM228B	P0C875	321 aa		4.4	□□□□□ -1.71
SNAP23-223	ENST00000627440	RPL35A	P18077	110 aa	Known RBP	4.4	□□□□□ -1.71
SNAP23-223	ENST00000627440	ARRB2	P32121	409 aa		4.4	□□□□□ -1.71
SNAP23-223	ENST00000627440	GRK5	P34947	590 aa		4.4	□□□□□ -1.71
SNAP23-223	ENST00000627440	MARCKSL1	P49006	195 aa		4.4	□□□□□ -1.71
SNAP23-223	ENST00000627440	BID	P55957	195 aa		4.4	□□□□□ -1.71
SNAP23-223	ENST00000627440	GMFB	P60983	142 aa		4.4	□□□□□ -1.71
SNAP23-223	ENST00000627440	BDH1	Q02338	343 aa		4.4	□□□□□ -1.71
SNAP23-223	ENST00000627440	UBXN1	Q04323	297 aa		4.4	□□□□□ -1.71
SNAP23-223	ENST00000627440	HNF4G	Q14541	408 aa		4.4	□□□□□ -1.71
SNAP23-223	ENST00000627440	KRTAP6-3	Q3LI67	103 aa		4.4	□□□□□ -1.71
SNAP23-223	ENST00000627440	LCN8	Q6JVE9	175 aa		4.4	□□□□□ -1.71
SNAP23-223	ENST00000627440	SLC25A47	Q6Q0C1	308 aa		4.4	□□□□□ -1.71
SNAP23-223	ENST00000627440		Q6ZRU5	148 aa		4.4	□□□□□ -1.71
SNAP23-223	ENST00000627440	CPLX4	Q7Z7G2	160 aa		4.4	□□□□□ -1.71
SNAP23-223	ENST00000627440	THNSL2	Q86YJ6	484 aa		4.4	□□□□□ -1.71
SNAP23-223	ENST00000627440	CALHM1	Q8IU99	346 aa		4.4	□□□□□ -1.71
SNAP23-223	ENST00000627440	OR5L1	Q8NGL2	311 aa		4.4	□□□□□ -1.71
SNAP23-223	ENST00000627440	OR13A1	Q8NGR1	328 aa		4.4	□□□□□ -1.71
SNAP23-223	ENST00000627440	SLC35G2	Q8TBE7	412 aa		4.4	□□□□□ -1.71
SNAP23-223	ENST00000627440	STK35	Q8TDR2	534 aa		4.4	□□□□□ -1.71
SNAP23-223	ENST00000627440	ANKRD49	Q8WVL7	239 aa		4.4	□□□□□ -1.71
SNAP23-223	ENST00000627440	BPIFA3	Q9BQP9	254 aa		4.4	□□□□□ -1.71
SNAP23-223	ENST00000627440	CLEC7A	Q9BXN2	247 aa		4.4	□□□□□ -1.71
SNAP23-223	ENST00000627440	TXNIP	Q9H3M7	391 aa		4.4	□□□□□ -1.71
SNAP23-223	ENST00000627440	DPH3P1	Q9H4G8	78 aa		4.4	□□□□□ -1.71
SNAP23-223	ENST00000627440	SIAE	Q9HAT2	523 aa		4.4	□□□□□ -1.71
SNAP23-223	ENST00000627440	RNPEPL1	Q9HAU8	725 aa		4.4	□□□□□ -1.71
SNAP23-223	ENST00000627440	LIN7C	Q9NUP9	197 aa	Known RBP	4.4	□□□□□ -1.71
SNAP23-223	ENST00000627440	HAO2	Q9NYQ3	351 aa		4.4	□□□□□ -1.71
SNAP23-223	ENST00000627440	SBDS	Q9Y3A5	250 aa	Known RBP eCLIP	4.4	□□□□□ -1.71
SNAP23-223	ENST00000627440	IGLV5-52	A0A0A0MRZ9	124 aa		4.39	□□□□□ -1.71
SNAP23-223	ENST00000627440	FAM183A	A6NL82	134 aa		4.39	□□□□□ -1.71
SNAP23-223	ENST00000627440	LEUTX	A8MZ59	168 aa		4.39	□□□□□ -1.71
SNAP23-223	ENST00000627440	PSMD9	O00233	223 aa		4.39	□□□□□ -1.71
SNAP23-223	ENST00000627440	EIF3H	O15372	352 aa	Known RBP eCLIP	4.39	□□□□□ -1.71
SNAP23-223	ENST00000627440	MITF	O75030	526 aa	Predicted RBP	4.39	□□□□□ -1.71
SNAP23-223	ENST00000627440	NPIPB7	O75200	414 aa		4.39	□□□□□ -1.71
SNAP23-223	ENST00000627440	AHSG	P02765	367 aa		4.39	□□□□□ -1.71
SNAP23-223	ENST00000627440	HMGN2	P05204	90 aa	Known RBP	4.39	□□□□□ -1.71
SNAP23-223	ENST00000627440	ACAA1	P09110	424 aa	Predicted RBP	4.39	□□□□□ -1.71
SNAP23-223	ENST00000627440	DNAH10OS	P0CZ25	163 aa		4.39	□□□□□ -1.71
SNAP23-223	ENST00000627440	GRPR	P30550	384 aa		4.39	□□□□□ -1.71
SNAP23-223	ENST00000627440	GABRA2	P47869	451 aa		4.39	□□□□□ -1.71
SNAP23-223	ENST00000627440	RPS16	P62249	146 aa	Known RBP	4.39	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms