RNA–Protein interactions for RNA: ENST00000623242.3

ATRX-209, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 3

Gene ATRX, Length 725 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-209ENST00000623242 NDNFQ8TB73 568 aa3.56□□□□□ -1.84
ATRX-209ENST00000623242 DYNC2LI1Q8TCX1 351 aa3.56□□□□□ -1.84
ATRX-209ENST00000623242 CHPT1Q8WUD6 406 aa3.56□□□□□ -1.84
ATRX-209ENST00000623242 THEM6Q8WUY1 208 aa3.56□□□□□ -1.84
ATRX-209ENST00000623242 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.56□□□□□ -1.84
ATRX-209ENST00000623242 TSEN15Q8WW01 171 aaKnown RBP3.56□□□□□ -1.84
ATRX-209ENST00000623242 NSMAFQ92636 917 aa3.56□□□□□ -1.84
ATRX-209ENST00000623242 SLC25A46Q96AG3 418 aa3.56□□□□□ -1.84
ATRX-209ENST00000623242 OMA1Q96E52 524 aa3.56□□□□□ -1.84
ATRX-209ENST00000623242 VSTM2LQ96N03 204 aa3.56□□□□□ -1.84
ATRX-209ENST00000623242 ZNF285Q96NJ3 590 aa3.56□□□□□ -1.84
ATRX-209ENST00000623242 TNFRSF13CQ96RJ3 184 aa3.56□□□□□ -1.84
ATRX-209ENST00000623242 INTS14Q96SY0 518 aa3.56□□□□□ -1.84
ATRX-209ENST00000623242 C7orf50Q9BRJ6 194 aaKnown RBP3.56□□□□□ -1.84
ATRX-209ENST00000623242 WWTR1Q9GZV5 400 aa3.56□□□□□ -1.84
ATRX-209ENST00000623242 OPA3Q9H6K4 179 aa3.56□□□□□ -1.84
ATRX-209ENST00000623242 NIPAL2Q9H841 368 aa3.56□□□□□ -1.84
ATRX-209ENST00000623242 LIN28AQ9H9Z2 209 aaKnown RBP3.56□□□□□ -1.84
ATRX-209ENST00000623242 GPN1Q9HCN4 374 aaPredicted RBP3.56□□□□□ -1.84
ATRX-209ENST00000623242 ACKR4Q9NPB9 350 aa3.56□□□□□ -1.84
ATRX-209ENST00000623242 FANCFQ9NPI8 374 aa3.56□□□□□ -1.84
ATRX-209ENST00000623242 DDX28Q9NUL7 540 aaKnown RBP3.56□□□□□ -1.84
ATRX-209ENST00000623242 DUX4Q9UBX2 424 aa3.56□□□□□ -1.84
ATRX-209ENST00000623242 DKKL1Q9UK85 242 aa3.56□□□□□ -1.84
ATRX-209ENST00000623242 KLK13Q9UKR3 277 aa3.56□□□□□ -1.84
ATRX-209ENST00000623242 ING4Q9UNL4 249 aa3.56□□□□□ -1.84
ATRX-209ENST00000623242 YARS2Q9Y2Z4 477 aaKnown RBP3.56□□□□□ -1.84
ATRX-209ENST00000623242 NEUROG3Q9Y4Z2 214 aa3.56□□□□□ -1.84
ATRX-209ENST00000623242 KCNE3Q9Y6H6 103 aa3.56□□□□□ -1.84
ATRX-209ENST00000623242 PIKFYVEQ9Y2I7 2098 aa3.55□□□□□ -1.84
ATRX-209ENST00000623242 RALGAPA1Q6GYQ0 2036 aa3.55□□□□□ -1.84
ATRX-209ENST00000623242 ZFC3H1O60293 1989 aaKnown RBP3.55□□□□□ -1.84
ATRX-209ENST00000623242 TRAV27A0A087WT01 109 aa3.55□□□□□ -1.84
ATRX-209ENST00000623242 TMED7-TICAM2A0A0A6YYA0 188 aa3.55□□□□□ -1.84
ATRX-209ENST00000623242 TRAV1-2A0A0B4J238 106 aa3.55□□□□□ -1.84
ATRX-209ENST00000623242 TRBV11-1A0A0K0K1C0 115 aa3.55□□□□□ -1.84
ATRX-209ENST00000623242 TRABD2BA6NFA1 517 aa3.55□□□□□ -1.84
ATRX-209ENST00000623242 NAP1L6A6NFF2 107 aa3.55□□□□□ -1.84
ATRX-209ENST00000623242 METTL15A6NJ78 407 aa3.55□□□□□ -1.84
ATRX-209ENST00000623242 C15orf62A8K5M9 175 aa3.55□□□□□ -1.84
ATRX-209ENST00000623242 LRRN3E7EW58 273 aa3.55□□□□□ -1.84
ATRX-209ENST00000623242 NPIPA2E9PIF3 369 aa3.55□□□□□ -1.84
ATRX-209ENST00000623242 NPIPA3F8WFD2 350 aa3.55□□□□□ -1.84
ATRX-209ENST00000623242 RRP8O43159 456 aaKnown RBP3.55□□□□□ -1.84
ATRX-209ENST00000623242 ZNF208O43345 1280 aa3.55□□□□□ -1.84
ATRX-209ENST00000623242 SULT1B1O43704 296 aa3.55□□□□□ -1.84
ATRX-209ENST00000623242 SCO2O43819 266 aa3.55□□□□□ -1.84
ATRX-209ENST00000623242 KHDRBS3O75525 346 aaKnown RBP3.55□□□□□ -1.84
ATRX-209ENST00000623242 MTRF1O75570 445 aaKnown RBP3.55□□□□□ -1.84
ATRX-209ENST00000623242 TBX6O95947 436 aaPredicted RBP3.55□□□□□ -1.84
ATRX-209ENST00000623242 PTHP01270 115 aa3.55□□□□□ -1.84
ATRX-209ENST00000623242 IGHG1P01857 330 aa3.55□□□□□ -1.84
ATRX-209ENST00000623242 UCHL1P09936 223 aa3.55□□□□□ -1.84
ATRX-209ENST00000623242 RAB40ALP0C0E4 278 aa3.55□□□□□ -1.84
ATRX-209ENST00000623242 H2BFMP0C1H6 154 aa3.55□□□□□ -1.84
ATRX-209ENST00000623242 SBK2P0C263 348 aa3.55□□□□□ -1.84
ATRX-209ENST00000623242 CT45A8P0DMV1 189 aa3.55□□□□□ -1.84
ATRX-209ENST00000623242 CT45A9P0DMV2 189 aa3.55□□□□□ -1.84
ATRX-209ENST00000623242 ZNF43P17038 809 aa3.55□□□□□ -1.84
ATRX-209ENST00000623242 TCN2P20062 427 aa3.55□□□□□ -1.84
ATRX-209ENST00000623242 MPZP25189 248 aa3.55□□□□□ -1.84
ATRX-209ENST00000623242 CD82P27701 267 aa3.55□□□□□ -1.84
ATRX-209ENST00000623242 HSD11B1P28845 292 aa3.55□□□□□ -1.84
ATRX-209ENST00000623242 EPHA2P29317 976 aa3.55□□□□□ -1.84
ATRX-209ENST00000623242 EVI2BP34910 448 aa3.55□□□□□ -1.84
ATRX-209ENST00000623242 ACVR1BP36896 505 aa3.55□□□□□ -1.84
ATRX-209ENST00000623242 OPRL1P41146 370 aa3.55□□□□□ -1.84
ATRX-209ENST00000623242 SOX3P41225 446 aa3.55□□□□□ -1.84
ATRX-209ENST00000623242 RPS5P46782 204 aaKnown RBP3.55□□□□□ -1.84
ATRX-209ENST00000623242 GABRA4P48169 554 aa3.55□□□□□ -1.84
ATRX-209ENST00000623242 PITPNBP48739 271 aa3.55□□□□□ -1.84
ATRX-209ENST00000623242 TGM4P49221 684 aa3.55□□□□□ -1.84
ATRX-209ENST00000623242 ETV1P50549 477 aa3.55□□□□□ -1.84
ATRX-209ENST00000623242 SSR4P51571 173 aa3.55□□□□□ -1.84
ATRX-209ENST00000623242 MLLT10P55197 1068 aa3.55□□□□□ -1.84
ATRX-209ENST00000623242 RPL27P61353 136 aaKnown RBP3.55□□□□□ -1.84
ATRX-209ENST00000623242 SLC3A1Q07837 685 aa3.55□□□□□ -1.84
ATRX-209ENST00000623242 ARL16Q0P5N6 197 aa3.55□□□□□ -1.84
ATRX-209ENST00000623242 CAMK2DQ13557 499 aa3.55□□□□□ -1.84
ATRX-209ENST00000623242 ARL6IP1Q15041 203 aa3.55□□□□□ -1.84
ATRX-209ENST00000623242 TOMM34Q15785 309 aaPredicted RBP3.55□□□□□ -1.84
ATRX-209ENST00000623242 NNATQ16517 81 aa3.55□□□□□ -1.84
ATRX-209ENST00000623242 SGCBQ16585 318 aa3.55□□□□□ -1.84
ATRX-209ENST00000623242 NDUFA5Q16718 116 aa3.55□□□□□ -1.84
ATRX-209ENST00000623242 ACSM3Q53FZ2 586 aa3.55□□□□□ -1.84
ATRX-209ENST00000623242 CCDC92Q53HC0 331 aaPredicted RBP3.55□□□□□ -1.84
ATRX-209ENST00000623242 CT45A2Q5DJT8 189 aa3.55□□□□□ -1.84
ATRX-209ENST00000623242 VWA2Q5GFL6 755 aa3.55□□□□□ -1.84
ATRX-209ENST00000623242 FAM76BQ5HYJ3 339 aa3.55□□□□□ -1.84
ATRX-209ENST00000623242 THEM4Q5T1C6 240 aa3.55□□□□□ -1.84
ATRX-209ENST00000623242 TMEM244Q5VVB8 128 aa3.55□□□□□ -1.84
ATRX-209ENST00000623242 C1orf140Q5VVS0 124 aa3.55□□□□□ -1.84
ATRX-209ENST00000623242 HBMQ6B0K9 141 aa3.55□□□□□ -1.84
ATRX-209ENST00000623242 PYHIN1Q6K0P9 492 aa3.55□□□□□ -1.84
ATRX-209ENST00000623242 ACSM5Q6NUN0 579 aa3.55□□□□□ -1.84
ATRX-209ENST00000623242 C3orf33Q6P1S2 294 aa3.55□□□□□ -1.84
ATRX-209ENST00000623242 NIPAL3Q6P499 406 aa3.55□□□□□ -1.84
ATRX-209ENST00000623242 Q6ZPB1 254 aaPredicted RBP3.55□□□□□ -1.84
ATRX-209ENST00000623242 CENPVQ7Z7K6 275 aaPredicted RBP3.55□□□□□ -1.84
ATRX-209ENST00000623242 HMGN2P46Q86SG4 172 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms