RNA–Protein interactions for RNA: ENST00000623056.3

LDB3-209, Transcript of LIM domain binding 3, humanhuman

TSL 5 BASIC

Gene LDB3, Length 2,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-209ENST00000623056 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.53□□□□□ -0.4
LDB3-209ENST00000623056 RNF144BQ7Z419 303 aa12.53□□□□□ -0.4
LDB3-209ENST00000623056 FAM71E2Q8N5Q1 922 aa12.53□□□□□ -0.4
LDB3-209ENST00000623056 OR13C9Q8NGT0 318 aa12.53□□□□□ -0.4
LDB3-209ENST00000623056 OR5H2Q8NGV7 314 aa12.53□□□□□ -0.4
LDB3-209ENST00000623056 OR13G1Q8NGZ3 307 aa12.53□□□□□ -0.4
LDB3-209ENST00000623056 RAB3CQ96E17 227 aa12.53□□□□□ -0.4
LDB3-209ENST00000623056 SCGB3A2Q96PL1 93 aa12.53□□□□□ -0.4
LDB3-209ENST00000623056 TOLLIPQ9H0E2 274 aa12.53□□□□□ -0.4
LDB3-209ENST00000623056 LPAR5Q9H1C0 372 aa12.53□□□□□ -0.4
LDB3-209ENST00000623056 FBLN5Q9UBX5 448 aa12.53□□□□□ -0.4
LDB3-209ENST00000623056 AMDHD2Q9Y303 409 aa12.53□□□□□ -0.4
LDB3-209ENST00000623056 A0A1W2PPE2 198 aa12.52□□□□□ -0.41
LDB3-209ENST00000623056 SOCS1O15524 211 aa12.52□□□□□ -0.41
LDB3-209ENST00000623056 NME2P1O60361 137 aa12.52□□□□□ -0.41
LDB3-209ENST00000623056 CHRM2P08172 466 aa12.52□□□□□ -0.41
LDB3-209ENST00000623056 ZNF823P16415 610 aa12.52□□□□□ -0.41
LDB3-209ENST00000623056 GLRA1P23415 457 aa12.52□□□□□ -0.41
LDB3-209ENST00000623056 CRABP1P29762 137 aa12.52□□□□□ -0.41
LDB3-209ENST00000623056 FCGR2CP31995 323 aa12.52□□□□□ -0.41
LDB3-209ENST00000623056 THBS4P35443 961 aa12.52□□□□□ -0.41
LDB3-209ENST00000623056 SLC6A8P48029 635 aa12.52□□□□□ -0.41
LDB3-209ENST00000623056 SEC13P55735 322 aa12.52□□□□□ -0.41
LDB3-209ENST00000623056 GPM6BQ13491 265 aa12.52□□□□□ -0.41
LDB3-209ENST00000623056 ZNF321PQ8N8H1 164 aa12.52□□□□□ -0.41
LDB3-209ENST00000623056 SLC26A10Q8NG04 563 aa12.52□□□□□ -0.41
LDB3-209ENST00000623056 ADOQ96SZ5 270 aa12.52□□□□□ -0.41
LDB3-209ENST00000623056 MAP3K3Q99759 626 aa12.52□□□□□ -0.41
LDB3-209ENST00000623056 WDR77Q9BQA1 342 aaPredicted RBP12.52□□□□□ -0.41
LDB3-209ENST00000623056 CNTNAP3Q9BZ76 1288 aa12.52□□□□□ -0.41
LDB3-209ENST00000623056 SMIM3Q9BZL3 60 aa12.52□□□□□ -0.41
LDB3-209ENST00000623056 FOXQ1Q9C009 403 aa12.52□□□□□ -0.41
LDB3-209ENST00000623056 NRSN2Q9GZP1 204 aa12.52□□□□□ -0.41
LDB3-209ENST00000623056 NXF5Q9H1B4 397 aaKnown RBP12.52□□□□□ -0.41
LDB3-209ENST00000623056 CEP290O15078 2479 aa12.51□□□□□ -0.41
LDB3-209ENST00000623056 CPAMD8Q8IZJ3 1885 aa12.51□□□□□ -0.41
LDB3-209ENST00000623056 RAD51DO75771 328 aa12.51□□□□□ -0.41
LDB3-209ENST00000623056 DXOO77932 396 aaKnown RBP12.51□□□□□ -0.41
LDB3-209ENST00000623056 MT-ATP6P00846 226 aa12.51□□□□□ -0.41
LDB3-209ENST00000623056 HOXC4P09017 264 aaPredicted RBP12.51□□□□□ -0.41
LDB3-209ENST00000623056 GSTP1P09211 210 aaKnown RBP12.51□□□□□ -0.41
LDB3-209ENST00000623056 HIST1H1DP16402 221 aaKnown RBP12.51□□□□□ -0.41
LDB3-209ENST00000623056 RAB5CP51148 216 aa12.51□□□□□ -0.41
LDB3-209ENST00000623056 TMEM33P57088 247 aa12.51□□□□□ -0.41
LDB3-209ENST00000623056 FAM3AP98173 230 aa12.51□□□□□ -0.41
LDB3-209ENST00000623056 RUNX3Q13761 415 aa12.51□□□□□ -0.41
LDB3-209ENST00000623056 AADACL3Q5VUY0 350 aa12.51□□□□□ -0.41
LDB3-209ENST00000623056 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.51□□□□□ -0.41
LDB3-209ENST00000623056 PRR22Q8IZ63 422 aa12.51□□□□□ -0.41
LDB3-209ENST00000623056 TMEM104Q8NE00 496 aa12.51□□□□□ -0.41
LDB3-209ENST00000623056 SPACA5Q96QH8 159 aa12.51□□□□□ -0.41
LDB3-209ENST00000623056 PFDN5Q99471 154 aa12.51□□□□□ -0.41
LDB3-209ENST00000623056 MTIF3Q9H2K0 278 aaKnown RBP12.51□□□□□ -0.41
LDB3-209ENST00000623056 LMAN1LQ9HAT1 526 aa12.51□□□□□ -0.41
LDB3-209ENST00000623056 CENPMQ9NSP4 180 aa12.51□□□□□ -0.41
LDB3-209ENST00000623056 EYSQ5T1H1 3165 aa12.51□□□□□ -0.41
LDB3-209ENST00000623056 UMAD1C9J7I0 102 aa12.51□□□□□ -0.41
LDB3-209ENST00000623056 SYT7O43581 403 aa12.51□□□□□ -0.41
LDB3-209ENST00000623056 ZNF354AO60765 605 aaPredicted RBP12.51□□□□□ -0.41
LDB3-209ENST00000623056 NUDT14O95848 222 aa12.51□□□□□ -0.41
LDB3-209ENST00000623056 MPIG6BO95866 241 aa12.51□□□□□ -0.41
LDB3-209ENST00000623056 TTRP02766 147 aa12.51□□□□□ -0.41
LDB3-209ENST00000623056 H2BFMP0C1H6 154 aa12.51□□□□□ -0.41
LDB3-209ENST00000623056 ATXN8OSP0DMR3 200 aa12.51□□□□□ -0.41
LDB3-209ENST00000623056 FOSL1P15407 271 aa12.51□□□□□ -0.41
LDB3-209ENST00000623056 NME1P15531 152 aaKnown RBP12.51□□□□□ -0.41
LDB3-209ENST00000623056 ZNF93P35789 620 aaPredicted RBP12.51□□□□□ -0.41
LDB3-209ENST00000623056 FMODQ06828 376 aa12.51□□□□□ -0.41
LDB3-209ENST00000623056 ZNF239Q16600 458 aaKnown RBP12.51□□□□□ -0.41
LDB3-209ENST00000623056 OPN5Q6U736 354 aa12.51□□□□□ -0.41
LDB3-209ENST00000623056 LHFPL1Q86WI0 220 aa12.51□□□□□ -0.41
LDB3-209ENST00000623056 COMMD1Q8N668 190 aa12.51□□□□□ -0.41
LDB3-209ENST00000623056 OIT3Q8WWZ8 545 aa12.51□□□□□ -0.41
LDB3-209ENST00000623056 MESP1Q9BRJ9 268 aa12.51□□□□□ -0.41
LDB3-209ENST00000623056 EIF5A2Q9GZV4 153 aaKnown RBP12.51□□□□□ -0.41
LDB3-209ENST00000623056 FAM206AQ9NX38 181 aa12.51□□□□□ -0.41
LDB3-209ENST00000623056 C17orf105B2RV13 164 aa12.5□□□□□ -0.41
LDB3-209ENST00000623056 PLPP3O14495 311 aa12.5□□□□□ -0.41
LDB3-209ENST00000623056 IGHMP01871 453 aa12.5□□□□□ -0.41
LDB3-209ENST00000623056 APODP05090 189 aa12.5□□□□□ -0.41
LDB3-209ENST00000623056 UCP2P55851 309 aa12.5□□□□□ -0.41
LDB3-209ENST00000623056 ZNF616Q08AN1 781 aa12.5□□□□□ -0.41
LDB3-209ENST00000623056 RHEBQ15382 184 aa12.5□□□□□ -0.41
LDB3-209ENST00000623056 C1orf140Q5VVS0 124 aa12.5□□□□□ -0.41
LDB3-209ENST00000623056 GLIPR1L1Q6UWM5 242 aa12.5□□□□□ -0.41
LDB3-209ENST00000623056 OR1J1Q8NGS3 322 aa12.5□□□□□ -0.41
LDB3-209ENST00000623056 FAM212BQ9NTI7 297 aaPredicted RBP12.5□□□□□ -0.41
LDB3-209ENST00000623056 TREM2Q9NZC2 230 aa12.5□□□□□ -0.41
LDB3-209ENST00000623056 OSGIN2Q9Y236 505 aa12.5□□□□□ -0.41
LDB3-209ENST00000623056 FIGNL2A6NMB9 653 aa12.5□□□□□ -0.41
LDB3-209ENST00000623056 SDCBPO00560 298 aaPredicted RBP12.5□□□□□ -0.41
LDB3-209ENST00000623056 YIF1AO95070 293 aa12.5□□□□□ -0.41
LDB3-209ENST00000623056 IFNA2P01563 188 aa12.5□□□□□ -0.41
LDB3-209ENST00000623056 IFNA17P01571 189 aa12.5□□□□□ -0.41
LDB3-209ENST00000623056 HLA-DOBP13765 273 aa12.5□□□□□ -0.41
LDB3-209ENST00000623056 AMY2BP19961 511 aa12.5□□□□□ -0.41
LDB3-209ENST00000623056 BCKDHBP21953 392 aa12.5□□□□□ -0.41
LDB3-209ENST00000623056 GPX4P36969 197 aaPredicted RBP12.5□□□□□ -0.41
LDB3-209ENST00000623056 MMP16P51512 607 aa12.5□□□□□ -0.41
LDB3-209ENST00000623056 TMEM50BP56557 158 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms