RNA–Protein interactions for RNA: ENST00000618999.4

SRGAP3-213, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5 BASIC

Gene SRGAP3, Length 3,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-213ENST00000618999 RPS10P5Q9NQ39 176 aa6.23□□□□□ -1.41
SRGAP3-213ENST00000618999 RAB22AQ9UL26 194 aa6.23□□□□□ -1.41
SRGAP3-213ENST00000618999 DTX4Q9Y2E6 619 aa6.23□□□□□ -1.41
SRGAP3-213ENST00000618999 EMC9Q9Y3B6 208 aa6.23□□□□□ -1.41
SRGAP3-213ENST00000618999 WIF1Q9Y5W5 379 aa6.23□□□□□ -1.41
SRGAP3-213ENST00000618999 C4orf47A7E2U8 309 aa6.23□□□□□ -1.41
SRGAP3-213ENST00000618999 CD8AP01732 235 aa6.23□□□□□ -1.41
SRGAP3-213ENST00000618999 FPR2P25090 351 aa6.23□□□□□ -1.41
SRGAP3-213ENST00000618999 CRABP1P29762 137 aa6.23□□□□□ -1.41
SRGAP3-213ENST00000618999 SLC6A8P48029 635 aa6.23□□□□□ -1.41
SRGAP3-213ENST00000618999 SLC9A3R2Q15599 337 aa6.23□□□□□ -1.41
SRGAP3-213ENST00000618999 ELAVL1Q15717 326 aaKnown RBP6.23□□□□□ -1.41
SRGAP3-213ENST00000618999 FAM189A2Q15884 450 aa6.23□□□□□ -1.41
SRGAP3-213ENST00000618999 KRBOX4Q5JUW0 171 aa6.23□□□□□ -1.41
SRGAP3-213ENST00000618999 IL34Q6ZMJ4 242 aa6.23□□□□□ -1.41
SRGAP3-213ENST00000618999 LANCL3Q6ZV70 420 aa6.23□□□□□ -1.41
SRGAP3-213ENST00000618999 MED25Q71SY5 747 aa6.23□□□□□ -1.41
SRGAP3-213ENST00000618999 PRR22Q8IZ63 422 aa6.23□□□□□ -1.41
SRGAP3-213ENST00000618999 ZNF321PQ8N8H1 164 aa6.23□□□□□ -1.41
SRGAP3-213ENST00000618999 ZDHHC22Q8N966 263 aa6.23□□□□□ -1.41
SRGAP3-213ENST00000618999 WBP1Q96G27 269 aa6.23□□□□□ -1.41
SRGAP3-213ENST00000618999 MOGAT1Q96PD6 335 aa6.23□□□□□ -1.41
SRGAP3-213ENST00000618999 CMSS1Q9BQ75 279 aaKnown RBP6.23□□□□□ -1.41
SRGAP3-213ENST00000618999 SULT4A1Q9BR01 284 aa6.23□□□□□ -1.41
SRGAP3-213ENST00000618999 ADAT1Q9BUB4 502 aaKnown RBP6.23□□□□□ -1.41
SRGAP3-213ENST00000618999 TMEM9BQ9NQ34 198 aa6.23□□□□□ -1.41
SRGAP3-213ENST00000618999 MMP26Q9NRE1 261 aa6.23□□□□□ -1.41
SRGAP3-213ENST00000618999 CNOT1A5YKK6 2376 aaKnown RBP6.23□□□□□ -1.41
SRGAP3-213ENST00000618999 TMEM269A0A1B0GVZ9 245 aa6.23□□□□□ -1.41
SRGAP3-213ENST00000618999 C9orf170A2RU37 121 aa6.23□□□□□ -1.41
SRGAP3-213ENST00000618999 NPIPA5E9PKD4 350 aa6.23□□□□□ -1.41
SRGAP3-213ENST00000618999 PRH1P02810 166 aa6.23□□□□□ -1.41
SRGAP3-213ENST00000618999 S100A8P05109 93 aa6.23□□□□□ -1.41
SRGAP3-213ENST00000618999 RBMXP38159 391 aaKnown RBP6.23□□□□□ -1.41
SRGAP3-213ENST00000618999 CD96P40200 585 aa6.23□□□□□ -1.41
SRGAP3-213ENST00000618999 CLDN6P56747 220 aa6.23□□□□□ -1.41
SRGAP3-213ENST00000618999 PJVKQ0ZLH3 352 aa6.23□□□□□ -1.41
SRGAP3-213ENST00000618999 SLC29A4Q7RTT9 530 aa6.23□□□□□ -1.41
SRGAP3-213ENST00000618999 SKA3Q8IX90 412 aa6.23□□□□□ -1.41
SRGAP3-213ENST00000618999 OR4K15Q8NH41 348 aa6.23□□□□□ -1.41
SRGAP3-213ENST00000618999 NANPQ8TBE9 248 aa6.23□□□□□ -1.41
SRGAP3-213ENST00000618999 PTPMT1Q8WUK0 201 aaPredicted RBP6.23□□□□□ -1.41
SRGAP3-213ENST00000618999 GPX7Q96SL4 187 aaPredicted RBP6.23□□□□□ -1.41
SRGAP3-213ENST00000618999 STRADBQ9C0K7 418 aa6.23□□□□□ -1.41
SRGAP3-213ENST00000618999 NPIPA1Q9UND3 350 aa6.23□□□□□ -1.41
SRGAP3-213ENST00000618999 KCNK7Q9Y2U2 307 aa6.23□□□□□ -1.41
SRGAP3-213ENST00000618999 A0A087WV48 116 aa6.22□□□□□ -1.41
SRGAP3-213ENST00000618999 C9J4A7 227 aa6.22□□□□□ -1.41
SRGAP3-213ENST00000618999 H3BMH7 237 aa6.22□□□□□ -1.41
SRGAP3-213ENST00000618999 GPANK1O95872 356 aa6.22□□□□□ -1.41
SRGAP3-213ENST00000618999 IFNA21P01568 189 aa6.22□□□□□ -1.41
SRGAP3-213ENST00000618999 SPP1P10451 314 aa6.22□□□□□ -1.41
SRGAP3-213ENST00000618999 PGCP20142 388 aa6.22□□□□□ -1.41
SRGAP3-213ENST00000618999 HRH1P35367 487 aa6.22□□□□□ -1.41
SRGAP3-213ENST00000618999 CX3CR1P49238 355 aa6.22□□□□□ -1.41
SRGAP3-213ENST00000618999 IGLV3-21P80748 117 aaPredicted RBP6.22□□□□□ -1.41
SRGAP3-213ENST00000618999 BMPERQ8N8U9 685 aa6.22□□□□□ -1.41
SRGAP3-213ENST00000618999 OR5H2Q8NGV7 314 aa6.22□□□□□ -1.41
SRGAP3-213ENST00000618999 SFT2D1Q8WV19 159 aa6.22□□□□□ -1.41
SRGAP3-213ENST00000618999 NUDCD2Q8WVJ2 157 aa6.22□□□□□ -1.41
SRGAP3-213ENST00000618999 C14orf79Q96F83 325 aa6.22□□□□□ -1.41
SRGAP3-213ENST00000618999 TSPAN32Q96QS1 320 aa6.22□□□□□ -1.41
SRGAP3-213ENST00000618999 NUDT9Q9BW91 350 aa6.22□□□□□ -1.41
SRGAP3-213ENST00000618999 SELENOIQ9C0D9 397 aa6.22□□□□□ -1.41
SRGAP3-213ENST00000618999 ELL3Q9HB65 397 aaPredicted RBP6.22□□□□□ -1.41
SRGAP3-213ENST00000618999 NIT2Q9NQR4 276 aa6.22□□□□□ -1.41
SRGAP3-213ENST00000618999 ANKRD10Q9NXR5 420 aa6.22□□□□□ -1.41
SRGAP3-213ENST00000618999 ZNF107Q9UII5 783 aaPredicted RBP6.22□□□□□ -1.41
SRGAP3-213ENST00000618999 LOC107986453A0A1B0GWG9 222 aa6.22□□□□□ -1.41
SRGAP3-213ENST00000618999 PRR32B1ATL7 298 aa6.22□□□□□ -1.41
SRGAP3-213ENST00000618999 SYT7O43581 403 aa6.22□□□□□ -1.41
SRGAP3-213ENST00000618999 IGKV1D-16P01601 117 aa6.22□□□□□ -1.41
SRGAP3-213ENST00000618999 PMP2P02689 132 aa6.22□□□□□ -1.41
SRGAP3-213ENST00000618999 ZNF883P0CG24 379 aa6.22□□□□□ -1.41
SRGAP3-213ENST00000618999 CBR1P16152 277 aa6.22□□□□□ -1.41
SRGAP3-213ENST00000618999 AMY2BP19961 511 aa6.22□□□□□ -1.41
SRGAP3-213ENST00000618999 LGALS4P56470 323 aa6.22□□□□□ -1.41
SRGAP3-213ENST00000618999 FUT7Q11130 342 aa6.22□□□□□ -1.41
SRGAP3-213ENST00000618999 TRA2AQ13595 282 aaKnown RBP eCLIP6.22□□□□□ -1.41
SRGAP3-213ENST00000618999 RBM39Q14498 530 aaKnown RBP6.22□□□□□ -1.41
SRGAP3-213ENST00000618999 IL11RAQ14626 422 aa6.22□□□□□ -1.41
SRGAP3-213ENST00000618999 EEF1A1P5Q5VTE0 462 aa6.22□□□□□ -1.41
SRGAP3-213ENST00000618999 MDGA2Q7Z553 956 aa6.22□□□□□ -1.41
SRGAP3-213ENST00000618999 SLC25A42Q86VD7 318 aa6.22□□□□□ -1.41
SRGAP3-213ENST00000618999 RNF128Q8TEB7 428 aa6.22□□□□□ -1.41
SRGAP3-213ENST00000618999 PIK3IP1Q96FE7 263 aa6.22□□□□□ -1.41
SRGAP3-213ENST00000618999 VSTM2LQ96N03 204 aa6.22□□□□□ -1.41
SRGAP3-213ENST00000618999 ADOQ96SZ5 270 aa6.22□□□□□ -1.41
SRGAP3-213ENST00000618999 SEC11CQ9BY50 192 aa6.22□□□□□ -1.41
SRGAP3-213ENST00000618999 AKIRIN1Q9H9L7 192 aaPredicted RBP6.22□□□□□ -1.41
SRGAP3-213ENST00000618999 RHOFQ9HBH0 211 aa6.22□□□□□ -1.41
SRGAP3-213ENST00000618999 UQCC1Q9NVA1 299 aa6.22□□□□□ -1.41
SRGAP3-213ENST00000618999 PISDQ9UG56 409 aa6.22□□□□□ -1.41
SRGAP3-213ENST00000618999 C14orf166Q9Y224 244 aaKnown RBP6.22□□□□□ -1.41
SRGAP3-213ENST00000618999 TRAV36DV7A0A075B6V5 113 aa6.22□□□□□ -1.41
SRGAP3-213ENST00000618999 DCTN6O00399 190 aa6.22□□□□□ -1.41
SRGAP3-213ENST00000618999 ADAM11O75078 769 aa6.22□□□□□ -1.41
SRGAP3-213ENST00000618999 TSPAN15O95858 294 aa6.22□□□□□ -1.41
SRGAP3-213ENST00000618999 CRYBA1P05813 215 aa6.22□□□□□ -1.41
SRGAP3-213ENST00000618999 KIR3DL2P43630 455 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms