RNA–Protein interactions for RNA: ENST00000617246.4

LPP-220, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPP, Length 18,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-220ENST00000617246 SMN1Q16637 294 aaKnown RBP2.99□□□□□ -1.93
LPP-220ENST00000617246 SLC7A13Q8TCU3 470 aa2.99□□□□□ -1.93
LPP-220ENST00000617246 SSMEM1Q8WWF3 244 aa2.99□□□□□ -1.93
LPP-220ENST00000617246 FAM84AQ96KN4 292 aa2.99□□□□□ -1.93
LPP-220ENST00000617246 GDF2Q9UK05 429 aaPredicted RBP2.99□□□□□ -1.93
LPP-220ENST00000617246 C9JCJ5 164 aa2.99□□□□□ -1.93
LPP-220ENST00000617246 TO15178 435 aa2.99□□□□□ -1.93
LPP-220ENST00000617246 ZP3P21754 424 aa2.99□□□□□ -1.93
LPP-220ENST00000617246 PFN3P60673 137 aa2.99□□□□□ -1.93
LPP-220ENST00000617246 QPRTQ15274 297 aa2.99□□□□□ -1.93
LPP-220ENST00000617246 LY6EQ16553 131 aa2.99□□□□□ -1.93
LPP-220ENST00000617246 GGTA1PQ4G0N0 100 aa2.99□□□□□ -1.93
LPP-220ENST00000617246 CALHM1Q8IU99 346 aa2.99□□□□□ -1.93
LPP-220ENST00000617246 PRELID1Q9Y255 219 aa2.99□□□□□ -1.93
LPP-220ENST00000617246 ALG5Q9Y673 324 aa2.99□□□□□ -1.93
LPP-220ENST00000617246 DHRS12A0PJE2 317 aa2.98□□□□□ -1.93
LPP-220ENST00000617246 NKX2-8O15522 239 aa2.98□□□□□ -1.93
LPP-220ENST00000617246 HTR1DP28221 377 aa2.98□□□□□ -1.93
LPP-220ENST00000617246 CEACAM16Q2WEN9 425 aa2.98□□□□□ -1.93
LPP-220ENST00000617246 FBXW9Q5XUX1 488 aa2.98□□□□□ -1.93
LPP-220ENST00000617246 CLDN19Q8N6F1 224 aa2.98□□□□□ -1.93
LPP-220ENST00000617246 SYT14Q8NB59 555 aa2.98□□□□□ -1.93
LPP-220ENST00000617246 SIX4Q9UIU6 781 aa2.98□□□□□ -1.93
LPP-220ENST00000617246 RCE1Q9Y256 329 aa2.98□□□□□ -1.93
LPP-220ENST00000617246 OR5B21A6NL26 309 aa2.98□□□□□ -1.93
LPP-220ENST00000617246 CXorf49A8MYA2 514 aaPredicted RBP2.98□□□□□ -1.93
LPP-220ENST00000617246 M0QYG6 137 aa2.98□□□□□ -1.93
LPP-220ENST00000617246 ADAM12O43184 909 aa2.98□□□□□ -1.93
LPP-220ENST00000617246 CGB3P0DN86 165 aa2.98□□□□□ -1.93
LPP-220ENST00000617246 KCNJ3P48549 501 aa2.98□□□□□ -1.93
LPP-220ENST00000617246 MEF2CQ06413 473 aaPredicted RBP2.98□□□□□ -1.93
LPP-220ENST00000617246 YIF1BQ5BJH7 314 aa2.98□□□□□ -1.93
LPP-220ENST00000617246 FAM122CQ6P4D5 195 aa2.98□□□□□ -1.93
LPP-220ENST00000617246 TEX26Q8N6G2 289 aa2.98□□□□□ -1.93
LPP-220ENST00000617246 OR5W2Q8NH69 310 aa2.98□□□□□ -1.93
LPP-220ENST00000617246 RPP25Q9BUL9 199 aaKnown RBP2.98□□□□□ -1.93
LPP-220ENST00000617246 HRH3Q9Y5N1 445 aa2.98□□□□□ -1.93
LPP-220ENST00000617246 A0A087WV62 115 aa2.98□□□□□ -1.93
LPP-220ENST00000617246 CDHR4A6H8M9 788 aa2.98□□□□□ -1.93
LPP-220ENST00000617246 A8MT66 165 aa2.98□□□□□ -1.93
LPP-220ENST00000617246 ALG1L2C9J202 215 aa2.98□□□□□ -1.93
LPP-220ENST00000617246 J3QLW9 94 aa2.98□□□□□ -1.93
LPP-220ENST00000617246 CCL4P13236 92 aa2.98□□□□□ -1.93
LPP-220ENST00000617246 ZNF19P17023 458 aa2.98□□□□□ -1.93
LPP-220ENST00000617246 MARCKSL1P49006 195 aa2.98□□□□□ -1.93
LPP-220ENST00000617246 CDKN2DP55273 166 aa2.98□□□□□ -1.93
LPP-220ENST00000617246 PIGPP57054 158 aa2.98□□□□□ -1.93
LPP-220ENST00000617246 ANKRD34AQ69YU3 496 aa2.98□□□□□ -1.93
LPP-220ENST00000617246 TEX38Q6PEX7 206 aa2.98□□□□□ -1.93
LPP-220ENST00000617246 RNF113BQ8IZP6 322 aaKnown RBP2.98□□□□□ -1.93
LPP-220ENST00000617246 MTURNQ8N3F0 131 aa2.98□□□□□ -1.93
LPP-220ENST00000617246 KHSRPQ92945 711 aaKnown RBP eCLIP2.98□□□□□ -1.93
LPP-220ENST00000617246 DLX4Q92988 240 aaPredicted RBP2.98□□□□□ -1.93
LPP-220ENST00000617246 MRPL22Q9NWU5 206 aaKnown RBP2.98□□□□□ -1.93
LPP-220ENST00000617246 HCSTQ9UBK5 93 aa2.98□□□□□ -1.93
LPP-220ENST00000617246 SIRPB1O00241 398 aa2.98□□□□□ -1.93
LPP-220ENST00000617246 FUT3P21217 361 aa2.98□□□□□ -1.93
LPP-220ENST00000617246 PSMB5P28074 263 aa2.98□□□□□ -1.93
LPP-220ENST00000617246 ISL1P61371 349 aa2.98□□□□□ -1.93
LPP-220ENST00000617246 DOK3Q7L591 496 aa2.98□□□□□ -1.93
LPP-220ENST00000617246 COMMD6Q7Z4G1 85 aa2.98□□□□□ -1.93
LPP-220ENST00000617246 KLHDC8BQ8IXV7 354 aa2.98□□□□□ -1.93
LPP-220ENST00000617246 TET1Q8NFU7 2136 aa2.98□□□□□ -1.93
LPP-220ENST00000617246 REEP6Q96HR9 211 aa2.98□□□□□ -1.93
LPP-220ENST00000617246 OR5B12Q96R08 314 aa2.98□□□□□ -1.93
LPP-220ENST00000617246 SLC25A31Q9H0C2 315 aa2.98□□□□□ -1.93
LPP-220ENST00000617246 BTNL2Q9UIR0 455 aa2.98□□□□□ -1.93
LPP-220ENST00000617246 SRRM3A6NNA2 597 aaPredicted RBP2.98□□□□□ -1.93
LPP-220ENST00000617246 IL18BPO95998 194 aa2.98□□□□□ -1.93
LPP-220ENST00000617246 TAS2R19P59542 299 aa2.98□□□□□ -1.93
LPP-220ENST00000617246 RPL27P61353 136 aaKnown RBP2.98□□□□□ -1.93
LPP-220ENST00000617246 BTG2P78543 158 aa2.98□□□□□ -1.93
LPP-220ENST00000617246 MFSD12Q6NUT3 480 aa2.98□□□□□ -1.93
LPP-220ENST00000617246 LRRC17Q8N6Y2 441 aa2.98□□□□□ -1.93
LPP-220ENST00000617246 EIF1ADQ8N9N8 165 aaKnown RBP2.98□□□□□ -1.93
LPP-220ENST00000617246 GIMAP1Q8WWP7 306 aa2.98□□□□□ -1.93
LPP-220ENST00000617246 TREX2Q9BQ50 279 aaPredicted RBP2.98□□□□□ -1.93
LPP-220ENST00000617246 IKZF5Q9H5V7 419 aa2.98□□□□□ -1.93
LPP-220ENST00000617246 MLXIPLQ9NP71 852 aa2.98□□□□□ -1.93
LPP-220ENST00000617246 TNRC6AQ8NDV7 1962 aaKnown RBP2.98□□□□□ -1.93
LPP-220ENST00000617246 ZFP92A6NM28 416 aa2.98□□□□□ -1.93
LPP-220ENST00000617246 ADAM10O14672 748 aa2.98□□□□□ -1.93
LPP-220ENST00000617246 SLC16A7O60669 478 aa2.98□□□□□ -1.93
LPP-220ENST00000617246 CDKN2BP42772 138 aa2.98□□□□□ -1.93
LPP-220ENST00000617246 ACSF3Q4G176 576 aaPredicted RBP2.98□□□□□ -1.93
LPP-220ENST00000617246 SPINK14Q6IE38 97 aa2.98□□□□□ -1.93
LPP-220ENST00000617246 OR10D3Q8NH80 312 aa2.98□□□□□ -1.93
LPP-220ENST00000617246 TUBA8Q9NY65 449 aaPredicted RBP2.98□□□□□ -1.93
LPP-220ENST00000617246 ARRB2P32121 409 aa2.98□□□□□ -1.93
LPP-220ENST00000617246 RORCP51449 518 aa2.98□□□□□ -1.93
LPP-220ENST00000617246 MMDQ15546 238 aa2.98□□□□□ -1.93
LPP-220ENST00000617246 LRRC75BQ2VPJ9 315 aa2.98□□□□□ -1.93
LPP-220ENST00000617246 PYDC2Q56P42 97 aa2.98□□□□□ -1.93
LPP-220ENST00000617246 FAM111BQ6SJ93 734 aa2.98□□□□□ -1.93
LPP-220ENST00000617246 ABHD12Q8N2K0 398 aa2.98□□□□□ -1.93
LPP-220ENST00000617246 OR4K13Q8NH42 304 aa2.98□□□□□ -1.93
LPP-220ENST00000617246 OR1L3Q8NH93 324 aa2.98□□□□□ -1.93
LPP-220ENST00000617246 PBDC1Q9BVG4 233 aa2.98□□□□□ -1.93
LPP-220ENST00000617246 OR52A5Q9H2C5 316 aa2.98□□□□□ -1.93
LPP-220ENST00000617246 INPP5EQ9NRR6 644 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms