RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 SP6Q3SY56 376 aa11.74□□□□□ -0.53
MSH6-214ENST00000616033 GFI1BQ5VTD9 330 aa11.74□□□□□ -0.53
MSH6-214ENST00000616033 ZNF561Q8N587 486 aa11.74□□□□□ -0.53
MSH6-214ENST00000616033 SLC30A7Q8NEW0 376 aa11.74□□□□□ -0.53
MSH6-214ENST00000616033 VSTM2LQ96N03 204 aa11.74□□□□□ -0.53
MSH6-214ENST00000616033 MED29Q9NX70 200 aa11.74□□□□□ -0.53
MSH6-214ENST00000616033 RFNGQ9Y644 331 aa11.74□□□□□ -0.53
MSH6-214ENST00000616033 BRWD1Q9NSI6 2320 aa11.74□□□□□ -0.53
MSH6-214ENST00000616033 DOCK8Q8NF50 2099 aa11.74□□□□□ -0.53
MSH6-214ENST00000616033 CRTAPO75718 401 aaPredicted RBP11.74□□□□□ -0.53
MSH6-214ENST00000616033 CELA2BP08218 269 aaPredicted RBP11.74□□□□□ -0.53
MSH6-214ENST00000616033 IL11P20809 199 aa11.74□□□□□ -0.53
MSH6-214ENST00000616033 ACKR3P25106 362 aa11.74□□□□□ -0.53
MSH6-214ENST00000616033 CAMLGP49069 296 aa11.74□□□□□ -0.53
MSH6-214ENST00000616033 EGR3Q06889 387 aa11.74□□□□□ -0.53
MSH6-214ENST00000616033 ZNF529Q6P280 563 aa11.74□□□□□ -0.53
MSH6-214ENST00000616033 PAQR4Q8N4S7 273 aaPredicted RBP11.74□□□□□ -0.53
MSH6-214ENST00000616033 RAB3CQ96E17 227 aa11.74□□□□□ -0.53
MSH6-214ENST00000616033 NXF5Q9H1B4 397 aaKnown RBP11.74□□□□□ -0.53
MSH6-214ENST00000616033 CXorf51AA0A1B0GTR3 108 aa11.73□□□□□ -0.53
MSH6-214ENST00000616033 UMAD1C9J7I0 102 aa11.73□□□□□ -0.53
MSH6-214ENST00000616033 SYT7O43581 403 aa11.73□□□□□ -0.53
MSH6-214ENST00000616033 DHPSP49366 369 aaPredicted RBP11.73□□□□□ -0.53
MSH6-214ENST00000616033 GSK3AP49840 483 aa11.73□□□□□ -0.53
MSH6-214ENST00000616033 CSNK2A1P68400 391 aaPredicted RBP11.73□□□□□ -0.53
MSH6-214ENST00000616033 UNC119Q13432 240 aa11.73□□□□□ -0.53
MSH6-214ENST00000616033 TANGO2Q6ICL3 276 aa11.73□□□□□ -0.53
MSH6-214ENST00000616033 DNM1P46Q6ZS02 220 aa11.73□□□□□ -0.53
MSH6-214ENST00000616033 CSNK2A3Q8NEV1 391 aa11.73□□□□□ -0.53
MSH6-214ENST00000616033 MFSD8Q8NHS3 518 aa11.73□□□□□ -0.53
MSH6-214ENST00000616033 EDAQ92838 391 aa11.73□□□□□ -0.53
MSH6-214ENST00000616033 TOMM40LQ969M1 308 aa11.73□□□□□ -0.53
MSH6-214ENST00000616033 EHFQ9NZC4 300 aa11.73□□□□□ -0.53
MSH6-214ENST00000616033 VSX1Q9NZR4 365 aaPredicted RBP11.73□□□□□ -0.53
MSH6-214ENST00000616033 ZNF264O43296 627 aa11.73□□□□□ -0.53
MSH6-214ENST00000616033 IFNA2P01563 188 aa11.73□□□□□ -0.53
MSH6-214ENST00000616033 SFTPCP11686 197 aa11.73□□□□□ -0.53
MSH6-214ENST00000616033 FCGR2CP31995 323 aa11.73□□□□□ -0.53
MSH6-214ENST00000616033 SLC25A1P53007 311 aa11.73□□□□□ -0.53
MSH6-214ENST00000616033 FBXW4P57775 412 aa11.73□□□□□ -0.53
MSH6-214ENST00000616033 RPS4XP62701 263 aaKnown RBP11.73□□□□□ -0.53
MSH6-214ENST00000616033 INSM1Q01101 510 aaPredicted RBP11.73□□□□□ -0.53
MSH6-214ENST00000616033 ARMC6Q6NXE6 501 aa11.73□□□□□ -0.53
MSH6-214ENST00000616033 NT5CQ8TCD5 201 aa11.73□□□□□ -0.53
MSH6-214ENST00000616033 REEP6Q96HR9 211 aa11.73□□□□□ -0.53
MSH6-214ENST00000616033 CCDC74BQ96LY2 380 aa11.73□□□□□ -0.53
MSH6-214ENST00000616033 TPSD1Q9BZJ3 242 aa11.73□□□□□ -0.53
MSH6-214ENST00000616033 YBX2Q9Y2T7 364 aaKnown RBP11.73□□□□□ -0.53
MSH6-214ENST00000616033 RHBDD3Q9Y3P4 386 aa11.73□□□□□ -0.53
MSH6-214ENST00000616033 WIF1Q9Y5W5 379 aa11.73□□□□□ -0.53
MSH6-214ENST00000616033 C17orf105B2RV13 164 aa11.73□□□□□ -0.53
MSH6-214ENST00000616033 K7EPK0 472 aa11.73□□□□□ -0.53
MSH6-214ENST00000616033 NSA2O95478 260 aaKnown RBP11.73□□□□□ -0.53
MSH6-214ENST00000616033 VSIG8P0DPA2 414 aa11.73□□□□□ -0.53
MSH6-214ENST00000616033 SERPINA2P20848 420 aa11.73□□□□□ -0.53
MSH6-214ENST00000616033 ZNF674Q2M3X9 581 aa11.73□□□□□ -0.53
MSH6-214ENST00000616033 ZNF260Q3ZCT1 412 aa11.73□□□□□ -0.53
MSH6-214ENST00000616033 P4HA3Q7Z4N8 544 aa11.73□□□□□ -0.53
MSH6-214ENST00000616033 FAM71E2Q8N5Q1 922 aa11.73□□□□□ -0.53
MSH6-214ENST00000616033 ADAT3Q96EY9 351 aaPredicted RBP11.73□□□□□ -0.53
MSH6-214ENST00000616033 C5orf66Q9H5L9 145 aa11.73□□□□□ -0.53
MSH6-214ENST00000616033 FBRSQ9HAH7 460 aa11.73□□□□□ -0.53
MSH6-214ENST00000616033 PDE7BQ9NP56 450 aa11.73□□□□□ -0.53
MSH6-214ENST00000616033 FBXL17Q9UF56 701 aa11.73□□□□□ -0.53
MSH6-214ENST00000616033 CA14Q9ULX7 337 aa11.73□□□□□ -0.53
MSH6-214ENST00000616033 SLC17A4Q9Y2C5 497 aa11.73□□□□□ -0.53
MSH6-214ENST00000616033 LINC00271P0C7V0 271 aa11.72□□□□□ -0.53
MSH6-214ENST00000616033 SMIM10L1P0DMW3 83 aa11.72□□□□□ -0.53
MSH6-214ENST00000616033 RAB5AP20339 215 aa11.72□□□□□ -0.53
MSH6-214ENST00000616033 MDKP21741 143 aaPredicted RBP11.72□□□□□ -0.53
MSH6-214ENST00000616033 BCKDHBP21953 392 aa11.72□□□□□ -0.53
MSH6-214ENST00000616033 GLP1RP43220 463 aa11.72□□□□□ -0.53
MSH6-214ENST00000616033 PRSS12P56730 875 aa11.72□□□□□ -0.53
MSH6-214ENST00000616033 GPM6BQ13491 265 aa11.72□□□□□ -0.53
MSH6-214ENST00000616033 GLIPR1L1Q6UWM5 242 aa11.72□□□□□ -0.53
MSH6-214ENST00000616033 IL34Q6ZMJ4 242 aa11.72□□□□□ -0.53
MSH6-214ENST00000616033 SHISA6Q6ZSJ9 500 aa11.72□□□□□ -0.53
MSH6-214ENST00000616033 ATG4DQ86TL0 474 aaPredicted RBP11.72□□□□□ -0.53
MSH6-214ENST00000616033 YAF2Q8IY57 180 aa11.72□□□□□ -0.53
MSH6-214ENST00000616033 EXD3Q8N9H8 876 aa11.72□□□□□ -0.53
MSH6-214ENST00000616033 OR5H2Q8NGV7 314 aa11.72□□□□□ -0.53
MSH6-214ENST00000616033 BSCL2Q96G97 398 aaPredicted RBP11.72□□□□□ -0.53
MSH6-214ENST00000616033 SMIM10Q96HG1 83 aa11.72□□□□□ -0.53
MSH6-214ENST00000616033 CELSR3Q9NYQ7 3312 aa11.72□□□□□ -0.53
MSH6-214ENST00000616033 PRSS37A4D1T9 235 aa11.72□□□□□ -0.53
MSH6-214ENST00000616033 FABP4P15090 132 aa11.72□□□□□ -0.53
MSH6-214ENST00000616033 C14orf28Q4W4Y0 310 aa11.72□□□□□ -0.53
MSH6-214ENST00000616033 CARD17Q5XLA6 110 aa11.72□□□□□ -0.53
MSH6-214ENST00000616033 C16orf47Q6ZP98 133 aaPredicted RBP11.72□□□□□ -0.53
MSH6-214ENST00000616033 SKA3Q8IX90 412 aa11.72□□□□□ -0.53
MSH6-214ENST00000616033 C17orf78Q8N4C9 275 aa11.72□□□□□ -0.53
MSH6-214ENST00000616033 SLC26A10Q8NG04 563 aa11.72□□□□□ -0.53
MSH6-214ENST00000616033 TERB2Q8NHR7 220 aa11.72□□□□□ -0.53
MSH6-214ENST00000616033 CTHRC1Q96CG8 243 aa11.72□□□□□ -0.53
MSH6-214ENST00000616033 RIMS4Q9H426 269 aaPredicted RBP11.72□□□□□ -0.53
MSH6-214ENST00000616033 TREM2Q9NZC2 230 aa11.72□□□□□ -0.53
MSH6-214ENST00000616033 IL17BQ9UHF5 180 aa11.72□□□□□ -0.53
MSH6-214ENST00000616033 ZDHHC8Q9ULC8 765 aa11.72□□□□□ -0.53
MSH6-214ENST00000616033 FLVCR1Q9Y5Y0 555 aa11.72□□□□□ -0.53
MSH6-214ENST00000616033 H3BML4 177 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms