RNA–Protein interactions for RNA: ENST00000612273.1

COL6A1-207, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL6A1, Length 3,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-207ENST00000612273 EHFQ9NZC4 300 aa12.45□□□□□ -0.42
COL6A1-207ENST00000612273 MAP1BP46821 2468 aaKnown RBP12.44□□□□□ -0.42
COL6A1-207ENST00000612273 NCOA6Q14686 2063 aaPredicted RBP12.44□□□□□ -0.42
COL6A1-207ENST00000612273 FAM221AA4D161 298 aa12.44□□□□□ -0.42
COL6A1-207ENST00000612273 LILRA5A6NI73 299 aa12.44□□□□□ -0.42
COL6A1-207ENST00000612273 TMEM127O75204 238 aa12.44□□□□□ -0.42
COL6A1-207ENST00000612273 ADCYAP1P18509 176 aa12.44□□□□□ -0.42
COL6A1-207ENST00000612273 TMEM50BP56557 158 aa12.44□□□□□ -0.42
COL6A1-207ENST00000612273 RAB32Q13637 225 aa12.44□□□□□ -0.42
COL6A1-207ENST00000612273 PDCD1Q15116 288 aa12.44□□□□□ -0.42
COL6A1-207ENST00000612273 TOMM20Q15388 145 aa12.44□□□□□ -0.42
COL6A1-207ENST00000612273 DRAM2Q6UX65 266 aa12.44□□□□□ -0.42
COL6A1-207ENST00000612273 CLEC18BQ6UXF7 455 aa12.44□□□□□ -0.42
COL6A1-207ENST00000612273 UEVLDQ8IX04 471 aa12.44□□□□□ -0.42
COL6A1-207ENST00000612273 PNLDC1Q8NA58 520 aaKnown RBP12.44□□□□□ -0.42
COL6A1-207ENST00000612273 OR10C1Q96KK4 312 aa12.44□□□□□ -0.42
COL6A1-207ENST00000612273 C5orf66Q9H5L9 145 aa12.44□□□□□ -0.42
COL6A1-207ENST00000612273 MED9Q9NWA0 146 aa12.44□□□□□ -0.42
COL6A1-207ENST00000612273 LHFPL6Q9Y693 200 aa12.44□□□□□ -0.42
COL6A1-207ENST00000612273 A6NIZ1 184 aa12.44□□□□□ -0.42
COL6A1-207ENST00000612273 STMND1H3BQB6 276 aa12.44□□□□□ -0.42
COL6A1-207ENST00000612273 FSTP19883 344 aa12.44□□□□□ -0.42
COL6A1-207ENST00000612273 RAP1BP61224 184 aa12.44□□□□□ -0.42
COL6A1-207ENST00000612273 RAP1AP62834 184 aa12.44□□□□□ -0.42
COL6A1-207ENST00000612273 LDLRAD3Q86YD5 345 aa12.44□□□□□ -0.42
COL6A1-207ENST00000612273 NKAIN3Q8N8D7 197 aa12.44□□□□□ -0.42
COL6A1-207ENST00000612273 TERB2Q8NHR7 220 aa12.44□□□□□ -0.42
COL6A1-207ENST00000612273 EDEM2Q9BV94 578 aa12.44□□□□□ -0.42
COL6A1-207ENST00000612273 SLC2A4RGQ9NR83 387 aa12.44□□□□□ -0.42
COL6A1-207ENST00000612273 GLS2Q9UI32 602 aa12.44□□□□□ -0.42
COL6A1-207ENST00000612273 ZDBF2Q9HCK1 2354 aa12.44□□□□□ -0.42
COL6A1-207ENST00000612273 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.43□□□□□ -0.42
COL6A1-207ENST00000612273 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.43□□□□□ -0.42
COL6A1-207ENST00000612273 LMO7DNF2Z398 122 aa12.43□□□□□ -0.42
COL6A1-207ENST00000612273 QDPRP09417 244 aa12.43□□□□□ -0.42
COL6A1-207ENST00000612273 GLULP15104 373 aa12.43□□□□□ -0.42
COL6A1-207ENST00000612273 PVALBP20472 110 aaPredicted RBP12.43□□□□□ -0.42
COL6A1-207ENST00000612273 BLVRBP30043 206 aaPredicted RBP12.43□□□□□ -0.42
COL6A1-207ENST00000612273 MMP16P51512 607 aa12.43□□□□□ -0.42
COL6A1-207ENST00000612273 C17orf67Q0P5P2 114 aa12.43□□□□□ -0.42
COL6A1-207ENST00000612273 ETV3LQ6ZN32 361 aa12.43□□□□□ -0.42
COL6A1-207ENST00000612273 BAP18Q8IXM2 172 aa12.43□□□□□ -0.42
COL6A1-207ENST00000612273 ESX1Q8N693 406 aa12.43□□□□□ -0.42
COL6A1-207ENST00000612273 OR5H2Q8NGV7 314 aa12.43□□□□□ -0.42
COL6A1-207ENST00000612273 KNTC1P50748 2209 aa12.43□□□□□ -0.42
COL6A1-207ENST00000612273 TMEM218A2RU14 115 aa12.43□□□□□ -0.42
COL6A1-207ENST00000612273 DUX1O43812 170 aa12.43□□□□□ -0.42
COL6A1-207ENST00000612273 FAHP16930 419 aa12.43□□□□□ -0.42
COL6A1-207ENST00000612273 CD27P26842 260 aa12.43□□□□□ -0.42
COL6A1-207ENST00000612273 LAP3P28838 519 aa12.43□□□□□ -0.42
COL6A1-207ENST00000612273 STK11Q15831 433 aa12.43□□□□□ -0.42
COL6A1-207ENST00000612273 ANKRD55Q3KP44 614 aa12.43□□□□□ -0.42
COL6A1-207ENST00000612273 PLXDC1Q8IUK5 500 aa12.43□□□□□ -0.42
COL6A1-207ENST00000612273 C20orf196Q8IYI0 205 aa12.43□□□□□ -0.42
COL6A1-207ENST00000612273 APCDD1LQ8NCL9 501 aa12.43□□□□□ -0.42
COL6A1-207ENST00000612273 SLC39A7Q92504 469 aa12.43□□□□□ -0.42
COL6A1-207ENST00000612273 DDIT4LQ96D03 193 aa12.43□□□□□ -0.42
COL6A1-207ENST00000612273 OR6C1Q96RD1 312 aa12.43□□□□□ -0.42
COL6A1-207ENST00000612273 RNF126Q9BV68 326 aa12.43□□□□□ -0.42
COL6A1-207ENST00000612273 FAM117AQ9C073 453 aa12.43□□□□□ -0.42
COL6A1-207ENST00000612273 CYB5R1Q9UHQ9 305 aa12.43□□□□□ -0.42
COL6A1-207ENST00000612273 SLC33A1O00400 549 aaPredicted RBP12.43□□□□□ -0.42
COL6A1-207ENST00000612273 DUS4LO95620 317 aaKnown RBP12.43□□□□□ -0.42
COL6A1-207ENST00000612273 DBHP09172 617 aa12.43□□□□□ -0.42
COL6A1-207ENST00000612273 NPBWR1P48145 328 aa12.43□□□□□ -0.42
COL6A1-207ENST00000612273 CX3CR1P49238 355 aa12.43□□□□□ -0.42
COL6A1-207ENST00000612273 SNU13P55769 128 aaKnown RBP12.43□□□□□ -0.42
COL6A1-207ENST00000612273 TOMM40LQ969M1 308 aa12.43□□□□□ -0.42
COL6A1-207ENST00000612273 PIK3IP1Q96FE7 263 aa12.43□□□□□ -0.42
COL6A1-207ENST00000612273 WDR77Q9BQA1 342 aaPredicted RBP12.43□□□□□ -0.42
COL6A1-207ENST00000612273 HSPB2A8KAH6 182 aa12.42□□□□□ -0.42
COL6A1-207ENST00000612273 ANGPTL7O43827 346 aa12.42□□□□□ -0.42
COL6A1-207ENST00000612273 WDPCPO95876 746 aa12.42□□□□□ -0.42
COL6A1-207ENST00000612273 ZNF43P17038 809 aa12.42□□□□□ -0.42
COL6A1-207ENST00000612273 OPRM1P35372 400 aa12.42□□□□□ -0.42
COL6A1-207ENST00000612273 GABREP78334 506 aa12.42□□□□□ -0.42
COL6A1-207ENST00000612273 SSBP1Q04837 148 aaKnown RBP12.42□□□□□ -0.42
COL6A1-207ENST00000612273 SCRN3Q0VDG4 424 aa12.42□□□□□ -0.42
COL6A1-207ENST00000612273 HSPB2Q16082 182 aa12.42□□□□□ -0.42
COL6A1-207ENST00000612273 SP6Q3SY56 376 aa12.42□□□□□ -0.42
COL6A1-207ENST00000612273 SDHAF3Q9NRP4 125 aa12.42□□□□□ -0.42
COL6A1-207ENST00000612273 ZNF581Q9P0T4 197 aa12.42□□□□□ -0.42
COL6A1-207ENST00000612273 SHANK1Q9Y566 2161 aa12.42□□□□□ -0.42
COL6A1-207ENST00000612273 LIPT2A6NK58 231 aa12.42□□□□□ -0.42
COL6A1-207ENST00000612273 ZNF726A6NNF4 738 aa12.42□□□□□ -0.42
COL6A1-207ENST00000612273 CELA2AP08217 269 aa12.42□□□□□ -0.42
COL6A1-207ENST00000612273 TPT1P13693 172 aaKnown RBP12.42□□□□□ -0.42
COL6A1-207ENST00000612273 CLDN17P56750 224 aa12.42□□□□□ -0.42
COL6A1-207ENST00000612273 COL13A1Q5TAT6 717 aaPredicted RBP12.42□□□□□ -0.42
COL6A1-207ENST00000612273 RPL7L1Q6DKI1 246 aaKnown RBP12.42□□□□□ -0.42
COL6A1-207ENST00000612273 PGAP1Q75T13 922 aa12.42□□□□□ -0.42
COL6A1-207ENST00000612273 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.42□□□□□ -0.42
COL6A1-207ENST00000612273 C6orf201Q7Z4U5 140 aa12.42□□□□□ -0.42
COL6A1-207ENST00000612273 PGAM5Q96HS1 289 aa12.42□□□□□ -0.42
COL6A1-207ENST00000612273 DNTTIP1Q9H147 329 aa12.42□□□□□ -0.42
COL6A1-207ENST00000612273 B3GAT1Q9P2W7 334 aa12.42□□□□□ -0.42
COL6A1-207ENST00000612273 A0A1W2PQD3 144 aa12.42□□□□□ -0.42
COL6A1-207ENST00000612273 ADAM10O14672 748 aa12.42□□□□□ -0.42
COL6A1-207ENST00000612273 CDC14BO60729 498 aa12.42□□□□□ -0.42
COL6A1-207ENST00000612273 LRP3O75074 770 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms