RNA–Protein interactions for RNA: ENST00000608532.1

HDDC2-207, Transcript of HD domain containing 2, humanhuman

TSL 3

Gene HDDC2, Length 553 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-207ENST00000608532 ZNF442Q9H7R0 627 aa1.52□□□□□ -2.17
HDDC2-207ENST00000608532 AGPAT4Q9NRZ5 378 aa1.52□□□□□ -2.17
HDDC2-207ENST00000608532 SLC17A4Q9Y2C5 497 aa1.52□□□□□ -2.17
HDDC2-207ENST00000608532 HEATR9A2RTY3 570 aa1.51□□□□□ -2.17
HDDC2-207ENST00000608532 ISPDA4D126 451 aa1.51□□□□□ -2.17
HDDC2-207ENST00000608532 NDUFAB1O14561 156 aa1.51□□□□□ -2.17
HDDC2-207ENST00000608532 OVOL1O14753 267 aa1.51□□□□□ -2.17
HDDC2-207ENST00000608532 LSM1O15116 133 aaKnown RBP1.51□□□□□ -2.17
HDDC2-207ENST00000608532 EIF3HO15372 352 aaKnown RBP eCLIP1.51□□□□□ -2.17
HDDC2-207ENST00000608532 RAD1O60671 282 aa1.51□□□□□ -2.17
HDDC2-207ENST00000608532 LSM8O95777 96 aaKnown RBP1.51□□□□□ -2.17
HDDC2-207ENST00000608532 HPRT1P00492 218 aa1.51□□□□□ -2.17
HDDC2-207ENST00000608532 NRASP01111 189 aa1.51□□□□□ -2.17
HDDC2-207ENST00000608532 HRASP01112 189 aa1.51□□□□□ -2.17
HDDC2-207ENST00000608532 KRASP01116 189 aa1.51□□□□□ -2.17
HDDC2-207ENST00000608532 THRAP10827 490 aa1.51□□□□□ -2.17
HDDC2-207ENST00000608532 USF1P22415 310 aaPredicted RBP1.51□□□□□ -2.17
HDDC2-207ENST00000608532 MYL9P24844 172 aa1.51□□□□□ -2.17
HDDC2-207ENST00000608532 PCK1P35558 622 aa1.51□□□□□ -2.17
HDDC2-207ENST00000608532 ZNF121P58317 390 aaPredicted RBP1.51□□□□□ -2.17
HDDC2-207ENST00000608532 RAB10P61026 200 aa1.51□□□□□ -2.17
HDDC2-207ENST00000608532 ACTR3P61158 418 aa1.51□□□□□ -2.17
HDDC2-207ENST00000608532 GCSAMLQ5JQS6 135 aa1.51□□□□□ -2.17
HDDC2-207ENST00000608532 TTC23LQ6PF05 361 aa1.51□□□□□ -2.17
HDDC2-207ENST00000608532 MORN3Q6PF18 240 aaPredicted RBP1.51□□□□□ -2.17
HDDC2-207ENST00000608532 BPIFCQ8NFQ6 507 aa1.51□□□□□ -2.17
HDDC2-207ENST00000608532 OR13C2Q8NGS9 318 aa1.51□□□□□ -2.17
HDDC2-207ENST00000608532 OR5K2Q8NHB8 316 aa1.51□□□□□ -2.17
HDDC2-207ENST00000608532 MUC7Q8TAX7 377 aa1.51□□□□□ -2.17
HDDC2-207ENST00000608532 ACTL9Q8TC94 416 aa1.51□□□□□ -2.17
HDDC2-207ENST00000608532 OTUB2Q96DC9 234 aa1.51□□□□□ -2.17
HDDC2-207ENST00000608532 OR2V2Q96R30 315 aa1.51□□□□□ -2.17
HDDC2-207ENST00000608532 ABCG5Q9H222 651 aa1.51□□□□□ -2.17
HDDC2-207ENST00000608532 MRM3Q9HC36 420 aaKnown RBP1.51□□□□□ -2.17
HDDC2-207ENST00000608532 MTCH1Q9NZJ7 389 aa1.51□□□□□ -2.17
HDDC2-207ENST00000608532 CLN8Q9UBY8 286 aa1.51□□□□□ -2.17
HDDC2-207ENST00000608532 PITPNC1Q9UKF7 332 aa1.51□□□□□ -2.17
HDDC2-207ENST00000608532 RAB23Q9ULC3 237 aa1.51□□□□□ -2.17
HDDC2-207ENST00000608532 SORL1Q92673 2214 aa1.51□□□□□ -2.17
HDDC2-207ENST00000608532 PRR14LQ5THK1 2151 aa1.51□□□□□ -2.17
HDDC2-207ENST00000608532 A6NDN8 102 aa1.5□□□□□ -2.17
HDDC2-207ENST00000608532 GOLGA6L4A6NEF3 574 aa1.5□□□□□ -2.17
HDDC2-207ENST00000608532 C15orf65H3BRN8 121 aa1.5□□□□□ -2.17
HDDC2-207ENST00000608532 H7C0C1 242 aa1.5□□□□□ -2.17
HDDC2-207ENST00000608532 DNALI1O14645 258 aaPredicted RBP1.5□□□□□ -2.17
HDDC2-207ENST00000608532 SLC9A3R1O14745 358 aaPredicted RBP1.5□□□□□ -2.17
HDDC2-207ENST00000608532 MAS1P04201 325 aa1.5□□□□□ -2.17
HDDC2-207ENST00000608532 PGA5P0DJD9 388 aa1.5□□□□□ -2.17
HDDC2-207ENST00000608532 MPIP34949 423 aa1.5□□□□□ -2.17
HDDC2-207ENST00000608532 TAGLN2P37802 199 aaKnown RBP1.5□□□□□ -2.17
HDDC2-207ENST00000608532 ATP5OP48047 213 aa1.5□□□□□ -2.17
HDDC2-207ENST00000608532 KRTAP12-1P59990 96 aa1.5□□□□□ -2.17
HDDC2-207ENST00000608532 CDH26Q8IXH8 852 aa1.5□□□□□ -2.17
HDDC2-207ENST00000608532 TBC1D21Q8IYX1 336 aa1.5□□□□□ -2.17
HDDC2-207ENST00000608532 OR4M2Q8NGB6 313 aa1.5□□□□□ -2.17
HDDC2-207ENST00000608532 OR4C13Q8NGP0 309 aa1.5□□□□□ -2.17
HDDC2-207ENST00000608532 UQCC2Q9BRT2 126 aa1.5□□□□□ -2.17
HDDC2-207ENST00000608532 D6RAR5 112 aa1.49□□□□□ -2.17
HDDC2-207ENST00000608532 PGA4P0DJD7 388 aa1.49□□□□□ -2.17
HDDC2-207ENST00000608532 PGA3P0DJD8 388 aa1.49□□□□□ -2.17
HDDC2-207ENST00000608532 PFN2P35080 140 aa1.49□□□□□ -2.17
HDDC2-207ENST00000608532 KLF3P57682 345 aaPredicted RBP1.49□□□□□ -2.17
HDDC2-207ENST00000608532 LIPEQ05469 1076 aa1.49□□□□□ -2.17
HDDC2-207ENST00000608532 XKR7Q5GH72 579 aa1.49□□□□□ -2.17
HDDC2-207ENST00000608532 LIN9Q5TKA1 542 aa1.49□□□□□ -2.17
HDDC2-207ENST00000608532 ZNF470Q6ECI4 717 aa1.49□□□□□ -2.17
HDDC2-207ENST00000608532 FAM228AQ86W67 206 aa1.49□□□□□ -2.17
HDDC2-207ENST00000608532 SLC25A29Q8N8R3 303 aa1.49□□□□□ -2.17
HDDC2-207ENST00000608532 DYNLL2Q96FJ2 89 aa1.49□□□□□ -2.17
HDDC2-207ENST00000608532 PKIBQ9C010 78 aa1.49□□□□□ -2.17
HDDC2-207ENST00000608532 RAB22AQ9UL26 194 aa1.49□□□□□ -2.17
HDDC2-207ENST00000608532 SLC22A7Q9Y694 548 aa1.49□□□□□ -2.17
HDDC2-207ENST00000608532 TRBV9A0A0B4J1U6 114 aa1.48□□□□□ -2.17
HDDC2-207ENST00000608532 NME4O00746 187 aa1.48□□□□□ -2.17
HDDC2-207ENST00000608532 IGHV1-46P01743 117 aa1.48□□□□□ -2.17
HDDC2-207ENST00000608532 CBR1P16152 277 aa1.48□□□□□ -2.17
HDDC2-207ENST00000608532 RAB4AP20338 218 aa1.48□□□□□ -2.17
HDDC2-207ENST00000608532 PBLDP30039 288 aaPredicted RBP1.48□□□□□ -2.17
HDDC2-207ENST00000608532 APLNRP35414 380 aa1.48□□□□□ -2.17
HDDC2-207ENST00000608532 PPP1CAP62136 330 aa1.48□□□□□ -2.17
HDDC2-207ENST00000608532 IL5RAQ01344 420 aa1.48□□□□□ -2.17
HDDC2-207ENST00000608532 TPBGQ13641 420 aa1.48□□□□□ -2.17
HDDC2-207ENST00000608532 HORMAD1Q86X24 394 aa1.48□□□□□ -2.17
HDDC2-207ENST00000608532 ELMO1Q92556 727 aa1.48□□□□□ -2.17
HDDC2-207ENST00000608532 RBPMSQ93062 196 aaKnown RBP1.48□□□□□ -2.17
HDDC2-207ENST00000608532 ACTR3CQ9C0K3 210 aaPredicted RBP1.48□□□□□ -2.17
HDDC2-207ENST00000608532 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP1.47□□□□□ -2.17
HDDC2-207ENST00000608532 RNF13O43567 381 aa1.47□□□□□ -2.17
HDDC2-207ENST00000608532 CPSF4O95639 269 aaKnown RBP1.47□□□□□ -2.17
HDDC2-207ENST00000608532 IGHG2P01859 326 aa1.47□□□□□ -2.17
HDDC2-207ENST00000608532 IGKV1-16P04430 117 aa1.47□□□□□ -2.17
HDDC2-207ENST00000608532 UQCRFS1P1P0C7P4 283 aa1.47□□□□□ -2.17
HDDC2-207ENST00000608532 MYL2P10916 166 aa1.47□□□□□ -2.17
HDDC2-207ENST00000608532 IFI30P13284 250 aa1.47□□□□□ -2.17
HDDC2-207ENST00000608532 BCKDHBP21953 392 aa1.47□□□□□ -2.17
HDDC2-207ENST00000608532 FMODQ06828 376 aa1.47□□□□□ -2.17
HDDC2-207ENST00000608532 ZNF678Q5SXM1 525 aa1.47□□□□□ -2.17
HDDC2-207ENST00000608532 LDLRAD2Q5SZI1 272 aa1.47□□□□□ -2.17
HDDC2-207ENST00000608532 MFSD14CQ5VZR4 134 aa1.47□□□□□ -2.17
HDDC2-207ENST00000608532 PAGE2Q7Z2X7 111 aa1.47□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms