RNA–Protein interactions for RNA: ENST00000607049.5

PKNOX1-210, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 762 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-210ENST00000607049 ZFAND2BQ8WV99 257 aa12.09□□□□□ -0.47
PKNOX1-210ENST00000607049 MROQ9BYG7 248 aa12.09□□□□□ -0.47
PKNOX1-210ENST00000607049 YIPF3Q9GZM5 350 aa12.09□□□□□ -0.47
PKNOX1-210ENST00000607049 CLN8Q9UBY8 286 aa12.09□□□□□ -0.47
PKNOX1-210ENST00000607049 DYSFO75923 2080 aa12.09□□□□□ -0.47
PKNOX1-210ENST00000607049 TRAV38-1A0A0B4J264 116 aa12.08□□□□□ -0.48
PKNOX1-210ENST00000607049 F5H0A9 414 aaPredicted RBP12.08□□□□□ -0.48
PKNOX1-210ENST00000607049 TRIM77I1YAP6 450 aa12.08□□□□□ -0.48
PKNOX1-210ENST00000607049 SELENOFO60613 162 aa12.08□□□□□ -0.48
PKNOX1-210ENST00000607049 PITPNBP48739 271 aa12.08□□□□□ -0.48
PKNOX1-210ENST00000607049 NPY4RP50391 375 aa12.08□□□□□ -0.48
PKNOX1-210ENST00000607049 ACTR3P61158 418 aa12.08□□□□□ -0.48
PKNOX1-210ENST00000607049 IL5RAQ01344 420 aa12.08□□□□□ -0.48
PKNOX1-210ENST00000607049 ZNF154Q13106 437 aa12.08□□□□□ -0.48
PKNOX1-210ENST00000607049 PTGES3Q15185 160 aaKnown RBP12.08□□□□□ -0.48
PKNOX1-210ENST00000607049 OR8B8Q15620 311 aa12.08□□□□□ -0.48
PKNOX1-210ENST00000607049 PRAMEF6Q5VXH4 476 aa12.08□□□□□ -0.48
PKNOX1-210ENST00000607049 TMEM236Q5W0B7 351 aa12.08□□□□□ -0.48
PKNOX1-210ENST00000607049 DEGS2Q6QHC5 323 aa12.08□□□□□ -0.48
PKNOX1-210ENST00000607049 USP43Q70EL4 1123 aa12.08□□□□□ -0.48
PKNOX1-210ENST00000607049 BOLLQ8N9W6 283 aaKnown RBP12.08□□□□□ -0.48
PKNOX1-210ENST00000607049 ASB17Q8WXJ9 295 aa12.08□□□□□ -0.48
PKNOX1-210ENST00000607049 ITFG2Q969R8 447 aa12.08□□□□□ -0.48
PKNOX1-210ENST00000607049 UTP4Q969X6 686 aaKnown RBP12.08□□□□□ -0.48
PKNOX1-210ENST00000607049 SGK3Q96BR1 496 aa12.08□□□□□ -0.48
PKNOX1-210ENST00000607049 MICU1Q9BPX6 476 aa12.08□□□□□ -0.48
PKNOX1-210ENST00000607049 TMEM246Q9BRR3 403 aa12.08□□□□□ -0.48
PKNOX1-210ENST00000607049 NTN4Q9HB63 628 aa12.08□□□□□ -0.48
PKNOX1-210ENST00000607049 C1orf123Q9NWV4 160 aa12.08□□□□□ -0.48
PKNOX1-210ENST00000607049 SVEP1Q4LDE5 3571 aa12.08□□□□□ -0.48
PKNOX1-210ENST00000607049 FBN1P35555 2871 aaKnown RBP12.08□□□□□ -0.48
PKNOX1-210ENST00000607049 STAB1Q9NY15 2570 aa12.07□□□□□ -0.48
PKNOX1-210ENST00000607049 ACOD1A6NK06 481 aa12.07□□□□□ -0.48
PKNOX1-210ENST00000607049 LGALS8O00214 317 aa12.07□□□□□ -0.48
PKNOX1-210ENST00000607049 PHYHO14832 338 aa12.07□□□□□ -0.48
PKNOX1-210ENST00000607049 PTBP3O95758 552 aaKnown RBP12.07□□□□□ -0.48
PKNOX1-210ENST00000607049 ZNF12P17014 697 aa12.07□□□□□ -0.48
PKNOX1-210ENST00000607049 ADRA2CP18825 462 aa12.07□□□□□ -0.48
PKNOX1-210ENST00000607049 GSK3AP49840 483 aa12.07□□□□□ -0.48
PKNOX1-210ENST00000607049 DAPP51397 102 aa12.07□□□□□ -0.48
PKNOX1-210ENST00000607049 PSMA6P60900 246 aaKnown RBP12.07□□□□□ -0.48
PKNOX1-210ENST00000607049 FAM3AP98173 230 aa12.07□□□□□ -0.48
PKNOX1-210ENST00000607049 MPPED2Q15777 294 aa12.07□□□□□ -0.48
PKNOX1-210ENST00000607049 CD276Q5ZPR3 534 aa12.07□□□□□ -0.48
PKNOX1-210ENST00000607049 C10orf67Q8IYJ2 551 aa12.07□□□□□ -0.48
PKNOX1-210ENST00000607049 DEFB108BQ8NET1 73 aa12.07□□□□□ -0.48
PKNOX1-210ENST00000607049 FAM81AQ8TBF8 368 aa12.07□□□□□ -0.48
PKNOX1-210ENST00000607049 HIST1H2AAQ96QV6 131 aa12.07□□□□□ -0.48
PKNOX1-210ENST00000607049 TEAD3Q99594 435 aa12.07□□□□□ -0.48
PKNOX1-210ENST00000607049 PAPOLGQ9BWT3 736 aaKnown RBP12.07□□□□□ -0.48
PKNOX1-210ENST00000607049 ERVK-18Q9QC07 812 aa12.07□□□□□ -0.48
PKNOX1-210ENST00000607049 INSIG2Q9Y5U4 225 aa12.07□□□□□ -0.48
PKNOX1-210ENST00000607049 MPC1Q9Y5U8 109 aa12.07□□□□□ -0.48
PKNOX1-210ENST00000607049 TANC2Q9HCD6 1990 aa12.07□□□□□ -0.48
PKNOX1-210ENST00000607049 SLC22A31A6NKX4 558 aa12.06□□□□□ -0.48
PKNOX1-210ENST00000607049 TRAPPC2LH3BP13 241 aa12.06□□□□□ -0.48
PKNOX1-210ENST00000607049 ZNF254O75437 659 aa12.06□□□□□ -0.48
PKNOX1-210ENST00000607049 AVPP01185 164 aa12.06□□□□□ -0.48
PKNOX1-210ENST00000607049 ALOX5APP20292 161 aa12.06□□□□□ -0.48
PKNOX1-210ENST00000607049 PMELP40967 661 aa12.06□□□□□ -0.48
PKNOX1-210ENST00000607049 SEC61A1P61619 476 aaKnown RBP12.06□□□□□ -0.48
PKNOX1-210ENST00000607049 C1orf229Q6ZS94 237 aaPredicted RBP12.06□□□□□ -0.48
PKNOX1-210ENST00000607049 COMMD2Q86X83 199 aa12.06□□□□□ -0.48
PKNOX1-210ENST00000607049 BBS1Q8NFJ9 593 aa12.06□□□□□ -0.48
PKNOX1-210ENST00000607049 RAB40AQ8WXH6 277 aa12.06□□□□□ -0.48
PKNOX1-210ENST00000607049 AMELYQ99218 206 aa12.06□□□□□ -0.48
PKNOX1-210ENST00000607049 CNN2Q99439 309 aaKnown RBP12.06□□□□□ -0.48
PKNOX1-210ENST00000607049 MNTQ99583 582 aa12.06□□□□□ -0.48
PKNOX1-210ENST00000607049 RTL8AQ9BWD3 113 aa12.06□□□□□ -0.48
PKNOX1-210ENST00000607049 OSBPL10Q9BXB5 764 aa12.06□□□□□ -0.48
PKNOX1-210ENST00000607049 RNPEPL1Q9HAU8 725 aa12.06□□□□□ -0.48
PKNOX1-210ENST00000607049 MMP26Q9NRE1 261 aa12.06□□□□□ -0.48
PKNOX1-210ENST00000607049 NUP50Q9UKX7 468 aa12.06□□□□□ -0.48
PKNOX1-210ENST00000607049 hCG_38984A0A1B0GV85 526 aa12.05□□□□□ -0.48
PKNOX1-210ENST00000607049 TMEM269A0A1B0GVZ9 245 aa12.05□□□□□ -0.48
PKNOX1-210ENST00000607049 OOEPA6NGQ2 149 aa12.05□□□□□ -0.48
PKNOX1-210ENST00000607049 C3orf80F5H4A9 247 aa12.05□□□□□ -0.48
PKNOX1-210ENST00000607049 SLC2A5P22732 501 aa12.05□□□□□ -0.48
PKNOX1-210ENST00000607049 HILS1P60008 231 aa12.05□□□□□ -0.48
PKNOX1-210ENST00000607049 ACTG1P63261 375 aa12.05□□□□□ -0.48
PKNOX1-210ENST00000607049 SRSF2Q01130 221 aaKnown RBP12.05□□□□□ -0.48
PKNOX1-210ENST00000607049 HNRNPA0Q13151 305 aaKnown RBP12.05□□□□□ -0.48
PKNOX1-210ENST00000607049 MICBQ29980 383 aa12.05□□□□□ -0.48
PKNOX1-210ENST00000607049 ZNF829Q3KNS6 432 aaPredicted RBP12.05□□□□□ -0.48
PKNOX1-210ENST00000607049 FAM201AQ5SY85 155 aa12.05□□□□□ -0.48
PKNOX1-210ENST00000607049 SFRP4Q6FHJ7 346 aaPredicted RBP12.05□□□□□ -0.48
PKNOX1-210ENST00000607049 CCDC121Q6ZUS5 278 aa12.05□□□□□ -0.48
PKNOX1-210ENST00000607049 MEPCEQ7L2J0 689 aaKnown RBP12.05□□□□□ -0.48
PKNOX1-210ENST00000607049 PRSS45Q7RTY3 260 aa12.05□□□□□ -0.48
PKNOX1-210ENST00000607049 GID4Q8IVV7 300 aa12.05□□□□□ -0.48
PKNOX1-210ENST00000607049 DVL3Q92997 716 aaPredicted RBP12.05□□□□□ -0.48
PKNOX1-210ENST00000607049 DUS3LQ96G46 650 aaKnown RBP12.05□□□□□ -0.48
PKNOX1-210ENST00000607049 CENPNQ96H22 339 aaPredicted RBP12.05□□□□□ -0.48
PKNOX1-210ENST00000607049 TECTBQ96PL2 329 aa12.05□□□□□ -0.48
PKNOX1-210ENST00000607049 MS4A7Q9GZW8 240 aaPredicted RBP12.05□□□□□ -0.48
PKNOX1-210ENST00000607049 OPN4Q9UHM6 478 aa12.05□□□□□ -0.48
PKNOX1-210ENST00000607049 IKZF2Q9UKS7 526 aa12.05□□□□□ -0.48
PKNOX1-210ENST00000607049 LRP12Q9Y561 859 aa12.05□□□□□ -0.48
PKNOX1-210ENST00000607049 ORC6Q9Y5N6 252 aa12.05□□□□□ -0.48
PKNOX1-210ENST00000607049 IGHV2-70DA0A0C4DH43 119 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms