RNA–Protein interactions for RNA: ENST00000606749.1

CUX1-219, Transcript of cut like homeobox 1, humanhuman

TSL 4

Gene CUX1, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-219ENST00000606749 CX3CR1P49238 355 aa6.31□□□□□ -1.4
CUX1-219ENST00000606749 GRB2P62993 217 aaKnown RBP6.31□□□□□ -1.4
CUX1-219ENST00000606749 EIF2B1Q14232 305 aaKnown RBP6.31□□□□□ -1.4
CUX1-219ENST00000606749 TRIM25Q14258 630 aaKnown RBP6.31□□□□□ -1.4
CUX1-219ENST00000606749 C11orf91Q3C1V1 193 aa6.31□□□□□ -1.4
CUX1-219ENST00000606749 FAM98BQ52LJ0 330 aaKnown RBP6.31□□□□□ -1.4
CUX1-219ENST00000606749 TEX36Q5VZQ5 186 aa6.31□□□□□ -1.4
CUX1-219ENST00000606749 RUSC1-AS1Q66K80 236 aa6.31□□□□□ -1.4
CUX1-219ENST00000606749 LCN8Q6JVE9 175 aa6.31□□□□□ -1.4
CUX1-219ENST00000606749 CD300LDQ6UXZ3 194 aa6.31□□□□□ -1.4
CUX1-219ENST00000606749 RHOUQ7L0Q8 258 aa6.31□□□□□ -1.4
CUX1-219ENST00000606749 SLC16A9Q7RTY1 509 aa6.31□□□□□ -1.4
CUX1-219ENST00000606749 PRSS45Q7RTY3 260 aa6.31□□□□□ -1.4
CUX1-219ENST00000606749 DPY19L4Q7Z388 723 aa6.31□□□□□ -1.4
CUX1-219ENST00000606749 FAM90A1Q86YD7 464 aa6.31□□□□□ -1.4
CUX1-219ENST00000606749 ARHGAP24Q8N264 748 aa6.31□□□□□ -1.4
CUX1-219ENST00000606749 GCSAMQ8N6F7 178 aa6.31□□□□□ -1.4
CUX1-219ENST00000606749 PNLDC1Q8NA58 520 aaKnown RBP6.31□□□□□ -1.4
CUX1-219ENST00000606749 OR6K6Q8NGW6 343 aa6.31□□□□□ -1.4
CUX1-219ENST00000606749 WDFY2Q96P53 400 aa6.31□□□□□ -1.4
CUX1-219ENST00000606749 TBX15Q96SF7 602 aa6.31□□□□□ -1.4
CUX1-219ENST00000606749 NIPSNAP1Q9BPW8 284 aa6.31□□□□□ -1.4
CUX1-219ENST00000606749 SIRPDQ9H106 197 aa6.31□□□□□ -1.4
CUX1-219ENST00000606749 SLITRK2Q9H156 845 aa6.31□□□□□ -1.4
CUX1-219ENST00000606749 MUC13Q9H3R2 512 aa6.31□□□□□ -1.4
CUX1-219ENST00000606749 TOR3AQ9H497 397 aa6.31□□□□□ -1.4
CUX1-219ENST00000606749 PPP1R3EQ9H7J1 279 aa6.31□□□□□ -1.4
CUX1-219ENST00000606749 REEP1Q9H902 201 aa6.31□□□□□ -1.4
CUX1-219ENST00000606749 MED20Q9H944 212 aa6.31□□□□□ -1.4
CUX1-219ENST00000606749 NOX4Q9NPH5 578 aa6.31□□□□□ -1.4
CUX1-219ENST00000606749 CMC2Q9NRP2 79 aa6.31□□□□□ -1.4
CUX1-219ENST00000606749 C14orf119Q9NWQ9 140 aa6.31□□□□□ -1.4
CUX1-219ENST00000606749 ZNF319Q9P2F9 582 aa6.31□□□□□ -1.4
CUX1-219ENST00000606749 KAAG1Q9UBP8 84 aa6.31□□□□□ -1.4
CUX1-219ENST00000606749 MMP24Q9Y5R2 645 aa6.31□□□□□ -1.4
CUX1-219ENST00000606749 IGHV3OR15-7A0A075B7D8 119 aa6.3□□□□□ -1.4
CUX1-219ENST00000606749 hCG_1807616A0A1W2PRN6 198 aa6.3□□□□□ -1.4
CUX1-219ENST00000606749 FAM183AA6NL82 134 aa6.3□□□□□ -1.4
CUX1-219ENST00000606749 RIIAD1A6NNX1 92 aa6.3□□□□□ -1.4
CUX1-219ENST00000606749 DVL1O14640 695 aa6.3□□□□□ -1.4
CUX1-219ENST00000606749 ECDO95905 644 aaPredicted RBP6.3□□□□□ -1.4
CUX1-219ENST00000606749 IFNGP01579 166 aa6.3□□□□□ -1.4
CUX1-219ENST00000606749 APOC1P02654 83 aa6.3□□□□□ -1.4
CUX1-219ENST00000606749 CRYBA1P05813 215 aa6.3□□□□□ -1.4
CUX1-219ENST00000606749 ANXA2P07355 339 aaKnown RBP6.3□□□□□ -1.4
CUX1-219ENST00000606749 T-ENOLP0DO92 83 aa6.3□□□□□ -1.4
CUX1-219ENST00000606749 MUC1P15941 1255 aaPredicted RBP6.3□□□□□ -1.4
CUX1-219ENST00000606749 ZNF3P17036 446 aa6.3□□□□□ -1.4
CUX1-219ENST00000606749 HSD11B1P28845 292 aa6.3□□□□□ -1.4
CUX1-219ENST00000606749 GSTT1P30711 240 aa6.3□□□□□ -1.4
CUX1-219ENST00000606749 GRK5P34947 590 aa6.3□□□□□ -1.4
CUX1-219ENST00000606749 GSK3AP49840 483 aa6.3□□□□□ -1.4
CUX1-219ENST00000606749 ZNF121P58317 390 aaPredicted RBP6.3□□□□□ -1.4
CUX1-219ENST00000606749 ARF6P62330 175 aa6.3□□□□□ -1.4
CUX1-219ENST00000606749 PDCD1Q15116 288 aa6.3□□□□□ -1.4
CUX1-219ENST00000606749 TIGD6Q17RP2 521 aa6.3□□□□□ -1.4
CUX1-219ENST00000606749 KLHL12Q53G59 568 aa6.3□□□□□ -1.4
CUX1-219ENST00000606749 METTL11BQ5VVY1 283 aa6.3□□□□□ -1.4
CUX1-219ENST00000606749 FIP1L1Q6UN15 594 aaKnown RBP6.3□□□□□ -1.4
CUX1-219ENST00000606749 FAM57BQ71RH2 274 aa6.3□□□□□ -1.4
CUX1-219ENST00000606749 BTN2A1Q7KYR7 527 aa6.3□□□□□ -1.4
CUX1-219ENST00000606749 SHFQ7M4L6 423 aa6.3□□□□□ -1.4
CUX1-219ENST00000606749 WDR86Q86TI4 376 aa6.3□□□□□ -1.4
CUX1-219ENST00000606749 ERI1Q8IV48 349 aaKnown RBP6.3□□□□□ -1.4
CUX1-219ENST00000606749 TIGD4Q8IY51 512 aa6.3□□□□□ -1.4
CUX1-219ENST00000606749 OR1M1Q8NGA1 313 aa6.3□□□□□ -1.4
CUX1-219ENST00000606749 OR10G2Q8NGC3 310 aa6.3□□□□□ -1.4
CUX1-219ENST00000606749 OR52H1Q8NGJ2 320 aa6.3□□□□□ -1.4
CUX1-219ENST00000606749 OR6N2Q8NGY6 317 aa6.3□□□□□ -1.4
CUX1-219ENST00000606749 OR8S1Q8NH09 359 aa6.3□□□□□ -1.4
CUX1-219ENST00000606749 RNF133Q8WVZ7 376 aa6.3□□□□□ -1.4
CUX1-219ENST00000606749 GATAD2BQ8WXI9 593 aa6.3□□□□□ -1.4
CUX1-219ENST00000606749 REEP6Q96HR9 211 aa6.3□□□□□ -1.4
CUX1-219ENST00000606749 FAM71F1Q96KD3 344 aaPredicted RBP6.3□□□□□ -1.4
CUX1-219ENST00000606749 CCT8L2Q96SF2 557 aa6.3□□□□□ -1.4
CUX1-219ENST00000606749 INTS14Q96SY0 518 aa6.3□□□□□ -1.4
CUX1-219ENST00000606749 AMELYQ99218 206 aa6.3□□□□□ -1.4
CUX1-219ENST00000606749 FEVQ99581 238 aa6.3□□□□□ -1.4
CUX1-219ENST00000606749 ABHD6Q9BV23 337 aa6.3□□□□□ -1.4
CUX1-219ENST00000606749 CHIAQ9BZP6 476 aa6.3□□□□□ -1.4
CUX1-219ENST00000606749 CNTD2Q9H8S5 307 aa6.3□□□□□ -1.4
CUX1-219ENST00000606749 SP140LQ9H930 580 aa6.3□□□□□ -1.4
CUX1-219ENST00000606749 MARCH7Q9H992 704 aa6.3□□□□□ -1.4
CUX1-219ENST00000606749 RNPEPL1Q9HAU8 725 aa6.3□□□□□ -1.4
CUX1-219ENST00000606749 TNFRSF19Q9NS68 423 aa6.3□□□□□ -1.4
CUX1-219ENST00000606749 C1RLQ9NZP8 487 aa6.3□□□□□ -1.4
CUX1-219ENST00000606749 KIF17Q9P2E2 1029 aa6.3□□□□□ -1.4
CUX1-219ENST00000606749 RHBDD3Q9Y3P4 386 aa6.3□□□□□ -1.4
CUX1-219ENST00000606749 IGHV1-69DA0A0B4J2H0 117 aa6.29□□□□□ -1.4
CUX1-219ENST00000606749 A0A1B0GUS0 222 aa6.29□□□□□ -1.4
CUX1-219ENST00000606749 hCG_38984A0A1B0GV85 526 aa6.29□□□□□ -1.4
CUX1-219ENST00000606749 A0A1B0GW55 424 aa6.29□□□□□ -1.4
CUX1-219ENST00000606749 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.29□□□□□ -1.4
CUX1-219ENST00000606749 ACOT8O14734 319 aa6.29□□□□□ -1.4
CUX1-219ENST00000606749 KCNAB3O43448 404 aa6.29□□□□□ -1.4
CUX1-219ENST00000606749 TIPRLO75663 272 aa6.29□□□□□ -1.4
CUX1-219ENST00000606749 GLCEO94923 617 aa6.29□□□□□ -1.4
CUX1-219ENST00000606749 CST1P01037 141 aa6.29□□□□□ -1.4
CUX1-219ENST00000606749 IGHV1-69P01742 117 aa6.29□□□□□ -1.4
CUX1-219ENST00000606749 MELTFP08582 738 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms