RNA–Protein interactions for RNA: ENST00000603717.1

AC008555.3-201, humanhuman

TSL 3 BASIC

Gene AC008555.3, Length 442 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC008555.3-201ENST00000603717 LINC00346Q8IVM7 164 aa4.85□□□□□ -1.63
AC008555.3-201ENST00000603717 C20orf196Q8IYI0 205 aa4.85□□□□□ -1.63
AC008555.3-201ENST00000603717 UBQLNLQ8IYU4 475 aa4.85□□□□□ -1.63
AC008555.3-201ENST00000603717 CMTM4Q8IZR5 234 aa4.85□□□□□ -1.63
AC008555.3-201ENST00000603717 Q8N402 240 aa4.85□□□□□ -1.63
AC008555.3-201ENST00000603717 SAMD12Q8N8I0 201 aa4.85□□□□□ -1.63
AC008555.3-201ENST00000603717 OR2M7Q8NG81 312 aa4.85□□□□□ -1.63
AC008555.3-201ENST00000603717 OR4M2Q8NGB6 313 aa4.85□□□□□ -1.63
AC008555.3-201ENST00000603717 HTRA1Q92743 480 aa4.85□□□□□ -1.63
AC008555.3-201ENST00000603717 YIPF5Q969M3 257 aa4.85□□□□□ -1.63
AC008555.3-201ENST00000603717 MARC2Q969Z3 335 aa4.85□□□□□ -1.63
AC008555.3-201ENST00000603717 TMEM106AQ96A25 262 aa4.85□□□□□ -1.63
AC008555.3-201ENST00000603717 SLC25A28Q96A46 364 aa4.85□□□□□ -1.63
AC008555.3-201ENST00000603717 TMEM45BQ96B21 275 aa4.85□□□□□ -1.63
AC008555.3-201ENST00000603717 HAVCR1Q96D42 359 aa4.85□□□□□ -1.63
AC008555.3-201ENST00000603717 SLAMF6Q96DU3 332 aa4.85□□□□□ -1.63
AC008555.3-201ENST00000603717 THOC3Q96J01 351 aaKnown RBP4.85□□□□□ -1.63
AC008555.3-201ENST00000603717 CCDC140Q96MF4 163 aa4.85□□□□□ -1.63
AC008555.3-201ENST00000603717 ZNF385AQ96PM9 386 aaKnown RBP4.85□□□□□ -1.63
AC008555.3-201ENST00000603717 RBP7Q96R05 134 aa4.85□□□□□ -1.63
AC008555.3-201ENST00000603717 ABHD1Q96SE0 405 aa4.85□□□□□ -1.63
AC008555.3-201ENST00000603717 COMMD4Q9H0A8 199 aa4.85□□□□□ -1.63
AC008555.3-201ENST00000603717 SLC25A18Q9H1K4 315 aa4.85□□□□□ -1.63
AC008555.3-201ENST00000603717 SLA2Q9H6Q3 261 aa4.85□□□□□ -1.63
AC008555.3-201ENST00000603717 RBFOX1Q9NWB1 397 aaKnown RBP4.85□□□□□ -1.63
AC008555.3-201ENST00000603717 GLTPQ9NZD2 209 aa4.85□□□□□ -1.63
AC008555.3-201ENST00000603717 OR5V1Q9UGF6 321 aa4.85□□□□□ -1.63
AC008555.3-201ENST00000603717 NUFIP1Q9UHK0 495 aaKnown RBP4.85□□□□□ -1.63
AC008555.3-201ENST00000603717 SH3BGRL2Q9UJC5 107 aa4.85□□□□□ -1.63
AC008555.3-201ENST00000603717 DKKL1Q9UK85 242 aa4.85□□□□□ -1.63
AC008555.3-201ENST00000603717 OR52A1Q9UKL2 312 aa4.85□□□□□ -1.63
AC008555.3-201ENST00000603717 CAMK2AQ9UQM7 478 aa4.85□□□□□ -1.63
AC008555.3-201ENST00000603717 RCE1Q9Y256 329 aa4.85□□□□□ -1.63
AC008555.3-201ENST00000603717 RBMX2Q9Y388 322 aaKnown RBP4.85□□□□□ -1.63
AC008555.3-201ENST00000603717 ETV7Q9Y603 341 aa4.85□□□□□ -1.63
AC008555.3-201ENST00000603717 V9GY05 133 aa4.85□□□□□ -1.63
AC008555.3-201ENST00000603717 CUL9Q8IWT3 2517 aa4.84□□□□□ -1.63
AC008555.3-201ENST00000603717 IGKV3D-15A0A087WSY6 115 aa4.84□□□□□ -1.63
AC008555.3-201ENST00000603717 LOC107986453A0A1B0GWG9 222 aa4.84□□□□□ -1.63
AC008555.3-201ENST00000603717 GJE1A6NN92 205 aa4.84□□□□□ -1.63
AC008555.3-201ENST00000603717 ZNF878C9JN71 531 aa4.84□□□□□ -1.63
AC008555.3-201ENST00000603717 NDUFS8O00217 210 aa4.84□□□□□ -1.63
AC008555.3-201ENST00000603717 SLC17A2O00624 439 aa4.84□□□□□ -1.63
AC008555.3-201ENST00000603717 TNFSF11O14788 317 aa4.84□□□□□ -1.63
AC008555.3-201ENST00000603717 LYRM1O43325 122 aa4.84□□□□□ -1.63
AC008555.3-201ENST00000603717 NME2P1O60361 137 aa4.84□□□□□ -1.63
AC008555.3-201ENST00000603717 DOK2O60496 412 aa4.84□□□□□ -1.63
AC008555.3-201ENST00000603717 CYTIPO60759 359 aa4.84□□□□□ -1.63
AC008555.3-201ENST00000603717 WDPCPO95876 746 aa4.84□□□□□ -1.63
AC008555.3-201ENST00000603717 HLA-DQA2P01906 255 aa4.84□□□□□ -1.63
AC008555.3-201ENST00000603717 APOC1P02654 83 aa4.84□□□□□ -1.63
AC008555.3-201ENST00000603717 ITGA5P08648 1049 aa4.84□□□□□ -1.63
AC008555.3-201ENST00000603717 QDPRP09417 244 aa4.84□□□□□ -1.63
AC008555.3-201ENST00000603717 ACSM4P0C7M7 580 aa4.84□□□□□ -1.63
AC008555.3-201ENST00000603717 UBCP0CG48 685 aaKnown RBP4.84□□□□□ -1.63
AC008555.3-201ENST00000603717 TRAPPC2P0DI81 140 aa4.84□□□□□ -1.63
AC008555.3-201ENST00000603717 TRAPPC2BP0DI82 140 aa4.84□□□□□ -1.63
AC008555.3-201ENST00000603717 NR2C1P13056 603 aa4.84□□□□□ -1.63
AC008555.3-201ENST00000603717 ZNF823P16415 610 aa4.84□□□□□ -1.63
AC008555.3-201ENST00000603717 ZNF708P17019 499 aa4.84□□□□□ -1.63
AC008555.3-201ENST00000603717 BMP5P22003 454 aa4.84□□□□□ -1.63
AC008555.3-201ENST00000603717 SLC6A1P30531 599 aa4.84□□□□□ -1.63
AC008555.3-201ENST00000603717 DDOSTP39656 456 aa4.84□□□□□ -1.63
AC008555.3-201ENST00000603717 PITPNBP48739 271 aa4.84□□□□□ -1.63
AC008555.3-201ENST00000603717 PTH2RP49190 550 aa4.84□□□□□ -1.63
AC008555.3-201ENST00000603717 LHX2P50458 406 aa4.84□□□□□ -1.63
AC008555.3-201ENST00000603717 CLDN17P56750 224 aa4.84□□□□□ -1.63
AC008555.3-201ENST00000603717 CLDN18P56856 261 aa4.84□□□□□ -1.63
AC008555.3-201ENST00000603717 CLRN1P58418 232 aa4.84□□□□□ -1.63
AC008555.3-201ENST00000603717 RAB4BP61018 213 aa4.84□□□□□ -1.63
AC008555.3-201ENST00000603717 MRPS34P82930 218 aaKnown RBP4.84□□□□□ -1.63
AC008555.3-201ENST00000603717 GALK2Q01415 458 aa4.84□□□□□ -1.63
AC008555.3-201ENST00000603717 IL18Q14116 193 aa4.84□□□□□ -1.63
AC008555.3-201ENST00000603717 PPA1Q15181 289 aa4.84□□□□□ -1.63
AC008555.3-201ENST00000603717 PLA1AQ53H76 456 aa4.84□□□□□ -1.63
AC008555.3-201ENST00000603717 PYDC2Q56P42 97 aa4.84□□□□□ -1.63
AC008555.3-201ENST00000603717 C1orf100Q5SVJ3 147 aa4.84□□□□□ -1.63
AC008555.3-201ENST00000603717 TMEM244Q5VVB8 128 aa4.84□□□□□ -1.63
AC008555.3-201ENST00000603717 AGAP6Q5VW22 663 aa4.84□□□□□ -1.63
AC008555.3-201ENST00000603717 TMEM225Q6GV28 225 aa4.84□□□□□ -1.63
AC008555.3-201ENST00000603717 LIN54Q6MZP7 749 aa4.84□□□□□ -1.63
AC008555.3-201ENST00000603717 IGFL2Q6UWQ7 119 aa4.84□□□□□ -1.63
AC008555.3-201ENST00000603717 C1orf122Q6ZSJ8 110 aa4.84□□□□□ -1.63
AC008555.3-201ENST00000603717 LINGO2Q7L985 606 aa4.84□□□□□ -1.63
AC008555.3-201ENST00000603717 YRDCQ86U90 279 aaKnown RBP4.84□□□□□ -1.63
AC008555.3-201ENST00000603717 TMPRSS12Q86WS5 348 aa4.84□□□□□ -1.63
AC008555.3-201ENST00000603717 ZNF676Q8N7Q3 588 aa4.84□□□□□ -1.63
AC008555.3-201ENST00000603717 ASCC1Q8N9N2 400 aaKnown RBP4.84□□□□□ -1.63
AC008555.3-201ENST00000603717 ZFP62Q8NB50 900 aaPredicted RBP4.84□□□□□ -1.63
AC008555.3-201ENST00000603717 DEFB124Q8NES8 71 aa4.84□□□□□ -1.63
AC008555.3-201ENST00000603717 OR2V1Q8NHB1 315 aa4.84□□□□□ -1.63
AC008555.3-201ENST00000603717 SMIM4Q8WVI0 70 aa4.84□□□□□ -1.63
AC008555.3-201ENST00000603717 RAB40AQ8WXH6 277 aa4.84□□□□□ -1.63
AC008555.3-201ENST00000603717 SCMH1Q96GD3 660 aa4.84□□□□□ -1.63
AC008555.3-201ENST00000603717 AGAP4Q96P64 663 aa4.84□□□□□ -1.63
AC008555.3-201ENST00000603717 FAM173AQ9BQD7 235 aa4.84□□□□□ -1.63
AC008555.3-201ENST00000603717 MARVELD1Q9BSK0 173 aa4.84□□□□□ -1.63
AC008555.3-201ENST00000603717 NAA11Q9BSU3 229 aaPredicted RBP4.84□□□□□ -1.63
AC008555.3-201ENST00000603717 ZNF416Q9BWM5 594 aa4.84□□□□□ -1.63
AC008555.3-201ENST00000603717 HES7Q9BYE0 225 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms