RNA–Protein interactions for RNA: ENST00000599848.5

UPF1-207, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 1 (best) BASIC

Gene UPF1, Length 5,311 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-207ENST00000599848 TLE1Q04724 770 aa18.41■□□□□ 0.54
UPF1-207ENST00000599848 NKG7Q16617 165 aa18.41■□□□□ 0.54
UPF1-207ENST00000599848 SPANXN5Q5MJ07 72 aa18.41■□□□□ 0.54
UPF1-207ENST00000599848 DEGS2Q6QHC5 323 aa18.41■□□□□ 0.54
UPF1-207ENST00000599848 CLEC2AQ6UVW9 174 aa18.41■□□□□ 0.54
UPF1-207ENST00000599848 CDH26Q8IXH8 852 aa18.41■□□□□ 0.54
UPF1-207ENST00000599848 ADGRF3Q8IZF5 1079 aa18.41■□□□□ 0.54
UPF1-207ENST00000599848 MYH10P35580 1976 aa18.41■□□□□ 0.54
UPF1-207ENST00000599848 RPS10P46783 165 aaKnown RBP18.4■□□□□ 0.54
UPF1-207ENST00000599848 C2orf76Q3KRA6 126 aa18.4■□□□□ 0.54
UPF1-207ENST00000599848 SMRP1Q8NCR6 262 aa18.4■□□□□ 0.54
UPF1-207ENST00000599848 NIPSNAP1Q9BPW8 284 aa18.4■□□□□ 0.54
UPF1-207ENST00000599848 PLCH1Q4KWH8 1693 aa18.4■□□□□ 0.54
UPF1-207ENST00000599848 CORO6Q6QEF8 472 aa18.4■□□□□ 0.54
UPF1-207ENST00000599848 OR10D3Q8NH80 312 aa18.4■□□□□ 0.54
UPF1-207ENST00000599848 PTPRZ1P23471 2315 aaPredicted RBP18.4■□□□□ 0.54
UPF1-207ENST00000599848 PPM1DO15297 605 aa18.4■□□□□ 0.54
UPF1-207ENST00000599848 TCRBP04435 133 aa18.4■□□□□ 0.54
UPF1-207ENST00000599848 CNN1P51911 297 aaKnown RBP18.4■□□□□ 0.54
UPF1-207ENST00000599848 AKR7LQ8NHP1 331 aa18.4■□□□□ 0.54
UPF1-207ENST00000599848 ZNRF4Q8WWF5 429 aa18.4■□□□□ 0.54
UPF1-207ENST00000599848 PLA2G2FQ9BZM2 168 aa18.4■□□□□ 0.54
UPF1-207ENST00000599848 OR5H8P0DN80 308 aa18.4■□□□□ 0.54
UPF1-207ENST00000599848 ASB13Q8WXK3 278 aa18.4■□□□□ 0.54
UPF1-207ENST00000599848 WDR54Q9H977 334 aa18.4■□□□□ 0.54
UPF1-207ENST00000599848 A6NIN4 97 aa18.39■□□□□ 0.54
UPF1-207ENST00000599848 H2AFB1P0C5Y9 115 aa18.39■□□□□ 0.54
UPF1-207ENST00000599848 TMEM165Q9HC07 324 aa18.39■□□□□ 0.54
UPF1-207ENST00000599848 GALNSP34059 522 aa18.39■□□□□ 0.53
UPF1-207ENST00000599848 CD276Q5ZPR3 534 aa18.39■□□□□ 0.53
UPF1-207ENST00000599848 CCDC144NLQ6NUI1 221 aa18.39■□□□□ 0.53
UPF1-207ENST00000599848 Q7L0L9 218 aa18.39■□□□□ 0.53
UPF1-207ENST00000599848 YIPF5Q969M3 257 aa18.39■□□□□ 0.53
UPF1-207ENST00000599848 GABARAPL1Q9H0R8 117 aa18.39■□□□□ 0.53
UPF1-207ENST00000599848 MYH3P11055 1940 aa18.39■□□□□ 0.53
UPF1-207ENST00000599848 MS4A18H0YCH9 400 aa18.39■□□□□ 0.53
UPF1-207ENST00000599848 RAC3P60763 192 aa18.39■□□□□ 0.53
UPF1-207ENST00000599848 PPP1CBP62140 327 aa18.39■□□□□ 0.53
UPF1-207ENST00000599848 MS4A18Q3C1V0 323 aa18.39■□□□□ 0.53
UPF1-207ENST00000599848 OR6S1Q8NH40 331 aa18.39■□□□□ 0.53
UPF1-207ENST00000599848 WDR61Q9GZS3 305 aaKnown RBP18.39■□□□□ 0.53
UPF1-207ENST00000599848 GAR1Q9NY12 217 aaKnown RBP18.39■□□□□ 0.53
UPF1-207ENST00000599848 OSGIN2Q9Y236 505 aa18.39■□□□□ 0.53
UPF1-207ENST00000599848 ZNF835Q9Y2P0 537 aa18.39■□□□□ 0.53
UPF1-207ENST00000599848 NSG2Q9Y328 171 aa18.39■□□□□ 0.53
UPF1-207ENST00000599848 C16orf97H3BN30 126 aa18.38■□□□□ 0.53
UPF1-207ENST00000599848 ANGPTL7O43827 346 aa18.38■□□□□ 0.53
UPF1-207ENST00000599848 FCGR2CP31995 323 aa18.38■□□□□ 0.53
UPF1-207ENST00000599848 PAFAH1B2P68402 229 aa18.38■□□□□ 0.53
UPF1-207ENST00000599848 OR13D1Q8NGV5 346 aa18.38■□□□□ 0.53
UPF1-207ENST00000599848 GPR31O00270 319 aa18.38■□□□□ 0.53
UPF1-207ENST00000599848 ADAM20O43506 726 aa18.38■□□□□ 0.53
UPF1-207ENST00000599848 MGMTP16455 207 aa18.38■□□□□ 0.53
UPF1-207ENST00000599848 TFF2Q03403 129 aa18.38■□□□□ 0.53
UPF1-207ENST00000599848 ADIRFQ15847 76 aa18.38■□□□□ 0.53
UPF1-207ENST00000599848 ANKRD34AQ69YU3 496 aa18.38■□□□□ 0.53
UPF1-207ENST00000599848 OR10K1Q8NGX5 313 aa18.38■□□□□ 0.53
UPF1-207ENST00000599848 RASL11BQ9BPW5 248 aa18.38■□□□□ 0.53
UPF1-207ENST00000599848 MICAL3Q7RTP6 2002 aa18.38■□□□□ 0.53
UPF1-207ENST00000599848 M0R1X1 148 aa18.38■□□□□ 0.53
UPF1-207ENST00000599848 SLC25A1P53007 311 aa18.38■□□□□ 0.53
UPF1-207ENST00000599848 TMEM92Q6UXU6 159 aa18.38■□□□□ 0.53
UPF1-207ENST00000599848 CYHR1Q6ZMK1 362 aa18.38■□□□□ 0.53
UPF1-207ENST00000599848 OR2W3Q7Z3T1 314 aa18.38■□□□□ 0.53
UPF1-207ENST00000599848 SIAH3Q8IW03 269 aa18.38■□□□□ 0.53
UPF1-207ENST00000599848 MUC20Q8N307 709 aaPredicted RBP18.38■□□□□ 0.53
UPF1-207ENST00000599848 SEC22AQ96IW7 307 aa18.38■□□□□ 0.53
UPF1-207ENST00000599848 TGOLN2O43493 480 aa18.38■□□□□ 0.53
UPF1-207ENST00000599848 NGFP01138 241 aa18.38■□□□□ 0.53
UPF1-207ENST00000599848 MAST2Q6P0Q8 1798 aa18.38■□□□□ 0.53
UPF1-207ENST00000599848 CDK2AP1O14519 115 aa18.37■□□□□ 0.53
UPF1-207ENST00000599848 BTG1P62324 171 aa18.37■□□□□ 0.53
UPF1-207ENST00000599848 HIST2H3AQ71DI3 136 aa18.37■□□□□ 0.53
UPF1-207ENST00000599848 NRAPQ86VF7 1730 aa18.37■□□□□ 0.53
UPF1-207ENST00000599848 IL5P05113 134 aa18.37■□□□□ 0.53
UPF1-207ENST00000599848 NME2P22392 152 aa18.37■□□□□ 0.53
UPF1-207ENST00000599848 Q6ZPB1 254 aaPredicted RBP18.37■□□□□ 0.53
UPF1-207ENST00000599848 SMIM19Q96E16 107 aa18.37■□□□□ 0.53
UPF1-207ENST00000599848 PDCD1LG2Q9BQ51 273 aa18.37■□□□□ 0.53
UPF1-207ENST00000599848 ZNF768Q9H5H4 540 aaKnown RBP18.37■□□□□ 0.53
UPF1-207ENST00000599848 NARFLQ9H6Q4 476 aa18.37■□□□□ 0.53
UPF1-207ENST00000599848 HINT3Q9NQE9 182 aaKnown RBP18.37■□□□□ 0.53
UPF1-207ENST00000599848 IGHV5-51A0A0C4DH38 117 aa18.37■□□□□ 0.53
UPF1-207ENST00000599848 PRF1P14222 555 aa18.37■□□□□ 0.53
UPF1-207ENST00000599848 FPR2P25090 351 aa18.37■□□□□ 0.53
UPF1-207ENST00000599848 ELLP55199 621 aaPredicted RBP18.37■□□□□ 0.53
UPF1-207ENST00000599848 SMAGPQ0VAQ4 97 aa18.37■□□□□ 0.53
UPF1-207ENST00000599848 ZNF273Q14593 569 aa18.37■□□□□ 0.53
UPF1-207ENST00000599848 SOWAHCQ53LP3 525 aaPredicted RBP18.37■□□□□ 0.53
UPF1-207ENST00000599848 TMEM268Q5VZI3 342 aa18.37■□□□□ 0.53
UPF1-207ENST00000599848 LRRC29Q8WV35 223 aa18.37■□□□□ 0.53
UPF1-207ENST00000599848 SUCNR1Q9BXA5 334 aa18.37■□□□□ 0.53
UPF1-207ENST00000599848 DBX1A6NMT0 343 aa18.37■□□□□ 0.53
UPF1-207ENST00000599848 IFNL4K9M1U5 179 aa18.37■□□□□ 0.53
UPF1-207ENST00000599848 SEMA7AO75326 666 aa18.37■□□□□ 0.53
UPF1-207ENST00000599848 EMDP50402 254 aa18.37■□□□□ 0.53
UPF1-207ENST00000599848 OR2B8PP59922 312 aa18.37■□□□□ 0.53
UPF1-207ENST00000599848 SMN1Q16637 294 aaKnown RBP18.37■□□□□ 0.53
UPF1-207ENST00000599848 PRSS36Q5K4E3 855 aa18.37■□□□□ 0.53
UPF1-207ENST00000599848 ZNF425Q6IV72 752 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms