RNA–Protein interactions for RNA: ENST00000598907.5

SHKBP1-218, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-218ENST00000598907 ABHD16AO95870 558 aa11.77□□□□□ -0.53
SHKBP1-218ENST00000598907 MT-ND2P03891 347 aa11.77□□□□□ -0.53
SHKBP1-218ENST00000598907 RNASE1P07998 156 aaKnown RBP11.77□□□□□ -0.53
SHKBP1-218ENST00000598907 CELA3BP08861 270 aa11.77□□□□□ -0.53
SHKBP1-218ENST00000598907 COX5BP10606 129 aa11.77□□□□□ -0.53
SHKBP1-218ENST00000598907 CBR1P16152 277 aa11.77□□□□□ -0.53
SHKBP1-218ENST00000598907 ACHEP22303 614 aa11.77□□□□□ -0.53
SHKBP1-218ENST00000598907 OPRL1P41146 370 aa11.77□□□□□ -0.53
SHKBP1-218ENST00000598907 UBE2NP61088 152 aaKnown RBP11.77□□□□□ -0.53
SHKBP1-218ENST00000598907 GSG1Q2KHT4 349 aa11.77□□□□□ -0.53
SHKBP1-218ENST00000598907 RSPO1Q2MKA7 263 aaPredicted RBP11.77□□□□□ -0.53
SHKBP1-218ENST00000598907 KRTAP27-1Q3LI81 207 aa11.77□□□□□ -0.53
SHKBP1-218ENST00000598907 TMEM53Q6P2H8 277 aa11.77□□□□□ -0.53
SHKBP1-218ENST00000598907 ZNF773Q6PK81 442 aa11.77□□□□□ -0.53
SHKBP1-218ENST00000598907 ZNF322Q6U7Q0 402 aaPredicted RBP11.77□□□□□ -0.53
SHKBP1-218ENST00000598907 Q6ZPA2 131 aa11.77□□□□□ -0.53
SHKBP1-218ENST00000598907 DOK3Q7L591 496 aa11.77□□□□□ -0.53
SHKBP1-218ENST00000598907 VASH1Q7L8A9 365 aaPredicted RBP11.77□□□□□ -0.53
SHKBP1-218ENST00000598907 MDP1Q86V88 176 aa11.77□□□□□ -0.53
SHKBP1-218ENST00000598907 MYPOPQ86VE0 399 aaPredicted RBP11.77□□□□□ -0.53
SHKBP1-218ENST00000598907 ZNF584Q8IVC4 421 aa11.77□□□□□ -0.53
SHKBP1-218ENST00000598907 NANOGP1Q8N7R0 232 aa11.77□□□□□ -0.53
SHKBP1-218ENST00000598907 CPEB3Q8NE35 698 aaKnown RBP11.77□□□□□ -0.53
SHKBP1-218ENST00000598907 THEM6Q8WUY1 208 aa11.77□□□□□ -0.53
SHKBP1-218ENST00000598907 YIPF5Q969M3 257 aa11.77□□□□□ -0.53
SHKBP1-218ENST00000598907 SLAMF6Q96DU3 332 aa11.77□□□□□ -0.53
SHKBP1-218ENST00000598907 SLCO1C1Q9NYB5 712 aa11.77□□□□□ -0.53
SHKBP1-218ENST00000598907 OPN4Q9UHM6 478 aa11.77□□□□□ -0.53
SHKBP1-218ENST00000598907 CLEC2DQ9UHP7 191 aa11.77□□□□□ -0.53
SHKBP1-218ENST00000598907 MRM2Q9UI43 246 aaKnown RBP11.77□□□□□ -0.53
SHKBP1-218ENST00000598907 ATPIF1Q9UII2 106 aa11.77□□□□□ -0.53
SHKBP1-218ENST00000598907 BIRC6Q9NR09 4857 aa11.76□□□□□ -0.53
SHKBP1-218ENST00000598907 VSTM5A8MXK1 200 aa11.76□□□□□ -0.53
SHKBP1-218ENST00000598907 ZNF878C9JN71 531 aa11.76□□□□□ -0.53
SHKBP1-218ENST00000598907 M0R233 179 aa11.76□□□□□ -0.53
SHKBP1-218ENST00000598907 ZNF254O75437 659 aa11.76□□□□□ -0.53
SHKBP1-218ENST00000598907 SULT1C4O75897 302 aa11.76□□□□□ -0.53
SHKBP1-218ENST00000598907 FSHBP01225 129 aa11.76□□□□□ -0.53
SHKBP1-218ENST00000598907 IGKV3-15P01624 115 aa11.76□□□□□ -0.53
SHKBP1-218ENST00000598907 IGLV1-44P01699 117 aa11.76□□□□□ -0.53
SHKBP1-218ENST00000598907 CD79AP11912 226 aa11.76□□□□□ -0.53
SHKBP1-218ENST00000598907 ZNF14P17017 642 aaPredicted RBP11.76□□□□□ -0.53
SHKBP1-218ENST00000598907 MYL12AP19105 171 aa11.76□□□□□ -0.53
SHKBP1-218ENST00000598907 EEF1B2P24534 225 aaKnown RBP11.76□□□□□ -0.53
SHKBP1-218ENST00000598907 OTX1P32242 354 aaPredicted RBP11.76□□□□□ -0.53
SHKBP1-218ENST00000598907 SNTB2Q13425 540 aaKnown RBP11.76□□□□□ -0.53
SHKBP1-218ENST00000598907 C3orf36Q3SXR2 165 aa11.76□□□□□ -0.53
SHKBP1-218ENST00000598907 PABPC1L2AQ5JQF8 200 aa11.76□□□□□ -0.53
SHKBP1-218ENST00000598907 ZNF774Q6NX45 483 aa11.76□□□□□ -0.53
SHKBP1-218ENST00000598907 KCTD18Q6PI47 426 aaPredicted RBP11.76□□□□□ -0.53
SHKBP1-218ENST00000598907 KCTD20Q7Z5Y7 419 aa11.76□□□□□ -0.53
SHKBP1-218ENST00000598907 ZNF679Q8IYX0 411 aa11.76□□□□□ -0.53
SHKBP1-218ENST00000598907 SPARTQ8N0X7 666 aa11.76□□□□□ -0.53
SHKBP1-218ENST00000598907 BCL6BQ8N143 479 aaPredicted RBP11.76□□□□□ -0.53
SHKBP1-218ENST00000598907 SYS1Q8N2H4 156 aa11.76□□□□□ -0.53
SHKBP1-218ENST00000598907 KIR3DL3Q8N743 410 aa11.76□□□□□ -0.53
SHKBP1-218ENST00000598907 NUP37Q8NFH4 326 aa11.76□□□□□ -0.53
SHKBP1-218ENST00000598907 OR52N1Q8NH53 320 aa11.76□□□□□ -0.53
SHKBP1-218ENST00000598907 RDH5Q92781 318 aa11.76□□□□□ -0.53
SHKBP1-218ENST00000598907 RNF166Q96A37 237 aaPredicted RBP11.76□□□□□ -0.53
SHKBP1-218ENST00000598907 TMIGD2Q96BF3 282 aa11.76□□□□□ -0.53
SHKBP1-218ENST00000598907 COQ7Q99807 217 aa11.76□□□□□ -0.53
SHKBP1-218ENST00000598907 ALG8Q9BVK2 526 aa11.76□□□□□ -0.53
SHKBP1-218ENST00000598907 HDHD2Q9H0R4 259 aa11.76□□□□□ -0.53
SHKBP1-218ENST00000598907 RNF121Q9H920 327 aa11.76□□□□□ -0.53
SHKBP1-218ENST00000598907 MOV10Q9HCE1 1003 aaKnown RBP11.76□□□□□ -0.53
SHKBP1-218ENST00000598907 ZNF69Q9UC07 566 aa11.76□□□□□ -0.53
SHKBP1-218ENST00000598907 LSM2Q9Y333 95 aaKnown RBP11.76□□□□□ -0.53
SHKBP1-218ENST00000598907 CAB39Q9Y376 341 aaPredicted RBP11.76□□□□□ -0.53
SHKBP1-218ENST00000598907 MAGEA13PA6NCF6 341 aa11.75□□□□□ -0.53
SHKBP1-218ENST00000598907 METTL15A6NJ78 407 aa11.75□□□□□ -0.53
SHKBP1-218ENST00000598907 MAGEB4O15481 346 aaPredicted RBP11.75□□□□□ -0.53
SHKBP1-218ENST00000598907 DOK2O60496 412 aa11.75□□□□□ -0.53
SHKBP1-218ENST00000598907 TSPAN15O95858 294 aa11.75□□□□□ -0.53
SHKBP1-218ENST00000598907 SERPINA5P05154 406 aa11.75□□□□□ -0.53
SHKBP1-218ENST00000598907 DCTDP32321 178 aa11.75□□□□□ -0.53
SHKBP1-218ENST00000598907 CAPZA2P47755 286 aa11.75□□□□□ -0.53
SHKBP1-218ENST00000598907 ACTA2P62736 377 aa11.75□□□□□ -0.53
SHKBP1-218ENST00000598907 ACTG2P63267 376 aa11.75□□□□□ -0.53
SHKBP1-218ENST00000598907 EMX1Q04741 257 aaPredicted RBP11.75□□□□□ -0.53
SHKBP1-218ENST00000598907 ECH1Q13011 328 aa11.75□□□□□ -0.53
SHKBP1-218ENST00000598907 ARMCX4Q5H9R4 360 aa11.75□□□□□ -0.53
SHKBP1-218ENST00000598907 TMEM154Q6P9G4 183 aa11.75□□□□□ -0.53
SHKBP1-218ENST00000598907 LRRN1Q6UXK5 716 aa11.75□□□□□ -0.53
SHKBP1-218ENST00000598907 PLEKHG7Q6ZR37 379 aa11.75□□□□□ -0.53
SHKBP1-218ENST00000598907 TSPAN14Q8NG11 270 aa11.75□□□□□ -0.53
SHKBP1-218ENST00000598907 OR1F12Q8NHA8 337 aa11.75□□□□□ -0.53
SHKBP1-218ENST00000598907 AKR7LQ8NHP1 331 aa11.75□□□□□ -0.53
SHKBP1-218ENST00000598907 ZNF48Q96MX3 618 aaPredicted RBP11.75□□□□□ -0.53
SHKBP1-218ENST00000598907 MYCBPQ99417 103 aaPredicted RBP11.75□□□□□ -0.53
SHKBP1-218ENST00000598907 ATF6BQ99941 703 aa11.75□□□□□ -0.53
SHKBP1-218ENST00000598907 ISG20L2Q9H9L3 353 aaKnown RBP11.75□□□□□ -0.53
SHKBP1-218ENST00000598907 PLEK2Q9NYT0 353 aa11.75□□□□□ -0.53
SHKBP1-218ENST00000598907 FBXL3Q9UKT7 428 aa11.75□□□□□ -0.53
SHKBP1-218ENST00000598907 WNK2Q9Y3S1 2297 aa11.74□□□□□ -0.53
SHKBP1-218ENST00000598907 A0A087WXM4 84 aa11.74□□□□□ -0.53
SHKBP1-218ENST00000598907 TIMM23O14925 209 aa11.74□□□□□ -0.53
SHKBP1-218ENST00000598907 SRSF10O75494 262 aaKnown RBP11.74□□□□□ -0.53
SHKBP1-218ENST00000598907 SMIM18P0DKX4 95 aa11.74□□□□□ -0.53
SHKBP1-218ENST00000598907 ALDH3B1P43353 468 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms