RNA–Protein interactions for RNA: ENST00000597396.5

SHKBP1-214, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-214ENST00000597396 BPESC1Q9GZL8 116 aa16.68■□□□□ 0.26
SHKBP1-214ENST00000597396 GSX1Q9H4S2 264 aaPredicted RBP16.68■□□□□ 0.26
SHKBP1-214ENST00000597396 ZNF275Q9NSD4 429 aaPredicted RBP16.68■□□□□ 0.26
SHKBP1-214ENST00000597396 MRPL15Q9P015 296 aaKnown RBP16.68■□□□□ 0.26
SHKBP1-214ENST00000597396 OR52A1Q9UKL2 312 aa16.68■□□□□ 0.26
SHKBP1-214ENST00000597396 SNX5Q9Y5X3 404 aa16.68■□□□□ 0.26
SHKBP1-214ENST00000597396 ZNF469Q96JG9 3925 aaPredicted RBP16.68■□□□□ 0.26
SHKBP1-214ENST00000597396 VWC2LB2RUY7 222 aa16.67■□□□□ 0.26
SHKBP1-214ENST00000597396 F5H5P2 479 aa16.67■□□□□ 0.26
SHKBP1-214ENST00000597396 SRSF10O75494 262 aaKnown RBP16.67■□□□□ 0.26
SHKBP1-214ENST00000597396 TACSTD2P09758 323 aa16.67■□□□□ 0.26
SHKBP1-214ENST00000597396 GPR6P46095 362 aaPredicted RBP16.67■□□□□ 0.26
SHKBP1-214ENST00000597396 SRP9P49458 86 aaKnown RBP16.67■□□□□ 0.26
SHKBP1-214ENST00000597396 SNCBQ16143 134 aa16.67■□□□□ 0.26
SHKBP1-214ENST00000597396 SPRNQ5BIV9 151 aa16.67■□□□□ 0.26
SHKBP1-214ENST00000597396 C6orf52Q5T4I8 152 aa16.67■□□□□ 0.26
SHKBP1-214ENST00000597396 ZNF684Q5T5D7 378 aa16.67■□□□□ 0.26
SHKBP1-214ENST00000597396 MAPK1IP1LQ8NDC0 245 aa16.67■□□□□ 0.26
SHKBP1-214ENST00000597396 CSNK2A3Q8NEV1 391 aa16.67■□□□□ 0.26
SHKBP1-214ENST00000597396 LYZL4Q96KX0 146 aa16.67■□□□□ 0.26
SHKBP1-214ENST00000597396 ADAT1Q9BUB4 502 aaKnown RBP16.67■□□□□ 0.26
SHKBP1-214ENST00000597396 MRPS18AQ9NVS2 196 aaKnown RBP16.67■□□□□ 0.26
SHKBP1-214ENST00000597396 TREM2Q9NZC2 230 aa16.67■□□□□ 0.26
SHKBP1-214ENST00000597396 MYRFQ9Y2G1 1151 aa16.67■□□□□ 0.26
SHKBP1-214ENST00000597396 IRGMA1A4Y4 181 aa16.66■□□□□ 0.26
SHKBP1-214ENST00000597396 PPIHO43447 177 aaKnown RBP16.66■□□□□ 0.26
SHKBP1-214ENST00000597396 RP2O75695 350 aa16.66■□□□□ 0.26
SHKBP1-214ENST00000597396 TMEM33P57088 247 aa16.66■□□□□ 0.26
SHKBP1-214ENST00000597396 ACTA2P62736 377 aa16.66■□□□□ 0.26
SHKBP1-214ENST00000597396 ACTG2P63267 376 aa16.66■□□□□ 0.26
SHKBP1-214ENST00000597396 RIN1Q13671 783 aa16.66■□□□□ 0.26
SHKBP1-214ENST00000597396 OR8B8Q15620 311 aa16.66■□□□□ 0.26
SHKBP1-214ENST00000597396 CDONQ4KMG0 1287 aa16.66■□□□□ 0.26
SHKBP1-214ENST00000597396 IZUMO2Q6UXV1 221 aa16.66■□□□□ 0.26
SHKBP1-214ENST00000597396 KCTD20Q7Z5Y7 419 aa16.66■□□□□ 0.26
SHKBP1-214ENST00000597396 THAP5Q7Z6K1 395 aa16.66■□□□□ 0.26
SHKBP1-214ENST00000597396 LHFPL3Q86UP9 236 aa16.66■□□□□ 0.26
SHKBP1-214ENST00000597396 FTMTQ8N4E7 242 aa16.66■□□□□ 0.26
SHKBP1-214ENST00000597396 OR51E1Q8TCB6 317 aa16.66■□□□□ 0.26
SHKBP1-214ENST00000597396 CCL17Q92583 94 aa16.66■□□□□ 0.26
SHKBP1-214ENST00000597396 PPP1R14AQ96A00 147 aa16.66■□□□□ 0.26
SHKBP1-214ENST00000597396 FAM71F1Q96KD3 344 aaPredicted RBP16.66■□□□□ 0.26
SHKBP1-214ENST00000597396 MEGF10Q96KG7 1140 aa16.66■□□□□ 0.26
SHKBP1-214ENST00000597396 ALG8Q9BVK2 526 aa16.66■□□□□ 0.26
SHKBP1-214ENST00000597396 G6PC2Q9NQR9 355 aa16.66■□□□□ 0.26
SHKBP1-214ENST00000597396 GPR84Q9NQS5 396 aa16.66■□□□□ 0.26
SHKBP1-214ENST00000597396 INPP5EQ9NRR6 644 aa16.66■□□□□ 0.26
SHKBP1-214ENST00000597396 ACOXLQ9NUZ1 547 aa16.66■□□□□ 0.26
SHKBP1-214ENST00000597396 CACNG2Q9Y698 323 aa16.66■□□□□ 0.26
SHKBP1-214ENST00000597396 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP16.65■□□□□ 0.26
SHKBP1-214ENST00000597396 A0A1B0GWJ7 208 aa16.65■□□□□ 0.26
SHKBP1-214ENST00000597396 CLDN25C9JDP6 229 aa16.65■□□□□ 0.26
SHKBP1-214ENST00000597396 J3QLW9 94 aa16.65■□□□□ 0.26
SHKBP1-214ENST00000597396 GMDSO60547 372 aa16.65■□□□□ 0.26
SHKBP1-214ENST00000597396 FAM20BO75063 409 aa16.65■□□□□ 0.26
SHKBP1-214ENST00000597396 IGHA1P01876 353 aa16.65■□□□□ 0.26
SHKBP1-214ENST00000597396 TTRP02766 147 aa16.65■□□□□ 0.26
SHKBP1-214ENST00000597396 ZNF19P17023 458 aa16.65■□□□□ 0.26
SHKBP1-214ENST00000597396 HOXB4P17483 251 aaPredicted RBP16.65■□□□□ 0.26
SHKBP1-214ENST00000597396 USF1P22415 310 aaPredicted RBP16.65■□□□□ 0.26
SHKBP1-214ENST00000597396 GNALP38405 381 aa16.65■□□□□ 0.26
SHKBP1-214ENST00000597396 PSMB10P40306 273 aa16.65■□□□□ 0.26
SHKBP1-214ENST00000597396 MAP2K3P46734 347 aa16.65■□□□□ 0.26
SHKBP1-214ENST00000597396 OR12D2P58182 307 aa16.65■□□□□ 0.26
SHKBP1-214ENST00000597396 SLC3A1Q07837 685 aa16.65■□□□□ 0.26
SHKBP1-214ENST00000597396 GALEQ14376 348 aa16.65■□□□□ 0.26
SHKBP1-214ENST00000597396 CATSPERDQ86XM0 798 aa16.65■□□□□ 0.26
SHKBP1-214ENST00000597396 ELMOD2Q8IZ81 293 aa16.65■□□□□ 0.26
SHKBP1-214ENST00000597396 RORBQ92753 470 aa16.65■□□□□ 0.26
SHKBP1-214ENST00000597396 DVL3Q92997 716 aaPredicted RBP16.65■□□□□ 0.26
SHKBP1-214ENST00000597396 PAPOLGQ9BWT3 736 aaKnown RBP16.65■□□□□ 0.26
SHKBP1-214ENST00000597396 FGF20Q9NP95 211 aaPredicted RBP16.65■□□□□ 0.26
SHKBP1-214ENST00000597396 PPP1R3CQ9UQK1 317 aa16.65■□□□□ 0.26
SHKBP1-214ENST00000597396 NAV3Q8IVL0 2385 aa16.65■□□□□ 0.26
SHKBP1-214ENST00000597396 HSPA13P48723 471 aa16.64■□□□□ 0.25
SHKBP1-214ENST00000597396 LOXL1Q08397 574 aaPredicted RBP16.64■□□□□ 0.25
SHKBP1-214ENST00000597396 KLBQ86Z14 1044 aa16.64■□□□□ 0.25
SHKBP1-214ENST00000597396 SPERTQ8NA61 448 aa16.64■□□□□ 0.25
SHKBP1-214ENST00000597396 OR8S1Q8NH09 359 aa16.64■□□□□ 0.25
SHKBP1-214ENST00000597396 TIMD4Q96H15 378 aa16.64■□□□□ 0.25
SHKBP1-214ENST00000597396 C4orf36Q96KX1 117 aa16.64■□□□□ 0.25
SHKBP1-214ENST00000597396 SOX7Q9BT81 388 aa16.64■□□□□ 0.25
SHKBP1-214ENST00000597396 ERVK13-1Q9NX77 482 aa16.64■□□□□ 0.25
SHKBP1-214ENST00000597396 SLC22A13Q9Y226 551 aa16.64■□□□□ 0.25
SHKBP1-214ENST00000597396 A0A096LNT2 108 aa16.63■□□□□ 0.25
SHKBP1-214ENST00000597396 IGHV3-64DA0A0J9YX35 117 aa16.63■□□□□ 0.25
SHKBP1-214ENST00000597396 P2RY10O00398 339 aa16.63■□□□□ 0.25
SHKBP1-214ENST00000597396 MTRF1O75570 445 aaKnown RBP16.63■□□□□ 0.25
SHKBP1-214ENST00000597396 HTR1AP08908 422 aa16.63■□□□□ 0.25
SHKBP1-214ENST00000597396 ATP6V1B1P15313 513 aa16.63■□□□□ 0.25
SHKBP1-214ENST00000597396 ACKR3P25106 362 aa16.63■□□□□ 0.25
SHKBP1-214ENST00000597396 DCKP27707 260 aa16.63■□□□□ 0.25
SHKBP1-214ENST00000597396 VHLP40337 213 aa16.63■□□□□ 0.25
SHKBP1-214ENST00000597396 CD200P41217 278 aa16.63■□□□□ 0.25
SHKBP1-214ENST00000597396 MZT1Q08AG7 82 aa16.63■□□□□ 0.25
SHKBP1-214ENST00000597396 ODF4Q2M2E3 257 aa16.63■□□□□ 0.25
SHKBP1-214ENST00000597396 BIVMQ86UB2 503 aa16.63■□□□□ 0.25
SHKBP1-214ENST00000597396 ITFG2Q969R8 447 aa16.63■□□□□ 0.25
SHKBP1-214ENST00000597396 RHBDD3Q9Y3P4 386 aa16.63■□□□□ 0.25
SHKBP1-214ENST00000597396 ABCA1O95477 2261 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms