RNA–Protein interactions for RNA: ENST00000597325.1

SHKBP1-213, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-213ENST00000597325 A0A0U1RQV5 110 aa10.37□□□□□ -0.75
SHKBP1-213ENST00000597325 LOC107986453A0A1B0GWG9 222 aa10.37□□□□□ -0.75
SHKBP1-213ENST00000597325 P2RY10O00398 339 aa10.37□□□□□ -0.75
SHKBP1-213ENST00000597325 ZFPL1O95159 310 aa10.37□□□□□ -0.75
SHKBP1-213ENST00000597325 TTRP02766 147 aa10.37□□□□□ -0.75
SHKBP1-213ENST00000597325 FAM157BP0CG42 384 aa10.37□□□□□ -0.75
SHKBP1-213ENST00000597325 ZNF35P13682 527 aa10.37□□□□□ -0.75
SHKBP1-213ENST00000597325 ACHEP22303 614 aa10.37□□□□□ -0.75
SHKBP1-213ENST00000597325 WNT5AP41221 380 aa10.37□□□□□ -0.75
SHKBP1-213ENST00000597325 RAD52P43351 418 aa10.37□□□□□ -0.75
SHKBP1-213ENST00000597325 RPS23P62266 143 aaKnown RBP10.37□□□□□ -0.75
SHKBP1-213ENST00000597325 RPS25P62851 125 aaKnown RBP10.37□□□□□ -0.75
SHKBP1-213ENST00000597325 BSPH1Q075Z2 132 aa10.37□□□□□ -0.75
SHKBP1-213ENST00000597325 SSX1Q16384 188 aa10.37□□□□□ -0.75
SHKBP1-213ENST00000597325 SNAI3Q3KNW1 292 aa10.37□□□□□ -0.75
SHKBP1-213ENST00000597325 YIF1BQ5BJH7 314 aa10.37□□□□□ -0.75
SHKBP1-213ENST00000597325 BEX5Q5H9J7 111 aa10.37□□□□□ -0.75
SHKBP1-213ENST00000597325 GLYATL3Q5SZD4 288 aa10.37□□□□□ -0.75
SHKBP1-213ENST00000597325 C22orf34Q6ZV56 151 aa10.37□□□□□ -0.75
SHKBP1-213ENST00000597325 RFPL4BQ6ZWI9 263 aa10.37□□□□□ -0.75
SHKBP1-213ENST00000597325 PRSS45Q7RTY3 260 aa10.37□□□□□ -0.75
SHKBP1-213ENST00000597325 MRPL21Q7Z2W9 205 aaKnown RBP10.37□□□□□ -0.75
SHKBP1-213ENST00000597325 NAA40Q86UY6 237 aa10.37□□□□□ -0.75
SHKBP1-213ENST00000597325 SATL1Q86VE3 508 aa10.37□□□□□ -0.75
SHKBP1-213ENST00000597325 C1orf174Q8IYL3 243 aa10.37□□□□□ -0.75
SHKBP1-213ENST00000597325 PIAS4Q8N2W9 510 aaPredicted RBP10.37□□□□□ -0.75
SHKBP1-213ENST00000597325 MS4A15Q8N5U1 240 aa10.37□□□□□ -0.75
SHKBP1-213ENST00000597325 OR51E1Q8TCB6 317 aa10.37□□□□□ -0.75
SHKBP1-213ENST00000597325 RPS4Y2Q8TD47 263 aa10.37□□□□□ -0.75
SHKBP1-213ENST00000597325 TSEN15Q8WW01 171 aaKnown RBP10.37□□□□□ -0.75
SHKBP1-213ENST00000597325 THRSPQ92748 146 aa10.37□□□□□ -0.75
SHKBP1-213ENST00000597325 RNF166Q96A37 237 aaPredicted RBP10.37□□□□□ -0.75
SHKBP1-213ENST00000597325 REEP6Q96HR9 211 aa10.37□□□□□ -0.75
SHKBP1-213ENST00000597325 RADILQ96JH8 1075 aa10.37□□□□□ -0.75
SHKBP1-213ENST00000597325 PGLYRP3Q96LB9 341 aa10.37□□□□□ -0.75
SHKBP1-213ENST00000597325 BCL2L14Q9BZR8 327 aa10.37□□□□□ -0.75
SHKBP1-213ENST00000597325 OPA3Q9H6K4 179 aa10.37□□□□□ -0.75
SHKBP1-213ENST00000597325 TBCCD1Q9NVR7 557 aa10.37□□□□□ -0.75
SHKBP1-213ENST00000597325 HHLA2Q9UM44 414 aa10.37□□□□□ -0.75
SHKBP1-213ENST00000597325 USF3Q68DE3 2245 aa10.36□□□□□ -0.75
SHKBP1-213ENST00000597325 ATP6V1G2-DDX39BF2Z307 99 aa10.36□□□□□ -0.75
SHKBP1-213ENST00000597325 ABCD4O14678 606 aa10.36□□□□□ -0.75
SHKBP1-213ENST00000597325 SYT7O43581 403 aa10.36□□□□□ -0.75
SHKBP1-213ENST00000597325 ICMTO60725 284 aa10.36□□□□□ -0.75
SHKBP1-213ENST00000597325 MTRF1O75570 445 aaKnown RBP10.36□□□□□ -0.75
SHKBP1-213ENST00000597325 RGS9O75916 674 aaPredicted RBP10.36□□□□□ -0.75
SHKBP1-213ENST00000597325 HLA-DPB1P04440 258 aa10.36□□□□□ -0.75
SHKBP1-213ENST00000597325 ISG15P05161 165 aa10.36□□□□□ -0.75
SHKBP1-213ENST00000597325 CD3EP07766 207 aa10.36□□□□□ -0.75
SHKBP1-213ENST00000597325 ZNF12P17014 697 aa10.36□□□□□ -0.75
SHKBP1-213ENST00000597325 MAPK3P27361 379 aaPredicted RBP10.36□□□□□ -0.75
SHKBP1-213ENST00000597325 CALCRP30988 508 aa10.36□□□□□ -0.75
SHKBP1-213ENST00000597325 TGFBR2P37173 567 aa10.36□□□□□ -0.75
SHKBP1-213ENST00000597325 UCP2P55851 309 aa10.36□□□□□ -0.75
SHKBP1-213ENST00000597325 PPP1CBP62140 327 aa10.36□□□□□ -0.75
SHKBP1-213ENST00000597325 SNTB2Q13425 540 aaKnown RBP10.36□□□□□ -0.75
SHKBP1-213ENST00000597325 COLCA1Q6ZS62 124 aa10.36□□□□□ -0.75
SHKBP1-213ENST00000597325 DOK3Q7L591 496 aa10.36□□□□□ -0.75
SHKBP1-213ENST00000597325 ZNF101Q8IZC7 436 aa10.36□□□□□ -0.75
SHKBP1-213ENST00000597325 CCDC54Q8NEL0 328 aa10.36□□□□□ -0.75
SHKBP1-213ENST00000597325 OR1J1Q8NGS3 322 aa10.36□□□□□ -0.75
SHKBP1-213ENST00000597325 OR13C3Q8NGS6 347 aa10.36□□□□□ -0.75
SHKBP1-213ENST00000597325 GPR148Q8TDV2 347 aa10.36□□□□□ -0.75
SHKBP1-213ENST00000597325 PIGTQ969N2 578 aa10.36□□□□□ -0.75
SHKBP1-213ENST00000597325 TMEM203Q969S6 136 aa10.36□□□□□ -0.75
SHKBP1-213ENST00000597325 TMIGD2Q96BF3 282 aa10.36□□□□□ -0.75
SHKBP1-213ENST00000597325 YIPF6Q96EC8 236 aa10.36□□□□□ -0.75
SHKBP1-213ENST00000597325 PLPPR2Q96GM1 343 aa10.36□□□□□ -0.75
SHKBP1-213ENST00000597325 FAM71F1Q96KD3 344 aaPredicted RBP10.36□□□□□ -0.75
SHKBP1-213ENST00000597325 PLEKHA1Q9HB21 404 aa10.36□□□□□ -0.75
SHKBP1-213ENST00000597325 EXOSC4Q9NPD3 245 aaKnown RBP10.36□□□□□ -0.75
SHKBP1-213ENST00000597325 GPR84Q9NQS5 396 aa10.36□□□□□ -0.75
SHKBP1-213ENST00000597325 PTTG3PQ9NZH4 202 aa10.36□□□□□ -0.75
SHKBP1-213ENST00000597325 POU2F3Q9UKI9 436 aa10.36□□□□□ -0.75
SHKBP1-213ENST00000597325 STUB1Q9UNE7 303 aa10.36□□□□□ -0.75
SHKBP1-213ENST00000597325 CCDC160A6NGH7 325 aa10.35□□□□□ -0.75
SHKBP1-213ENST00000597325 NGFP01138 241 aa10.35□□□□□ -0.75
SHKBP1-213ENST00000597325 CD2P06729 351 aa10.35□□□□□ -0.75
SHKBP1-213ENST00000597325 OCM2P0CE71 109 aa10.35□□□□□ -0.75
SHKBP1-213ENST00000597325 NR4A1P22736 598 aa10.35□□□□□ -0.75
SHKBP1-213ENST00000597325 TUBG1P23258 451 aa10.35□□□□□ -0.75
SHKBP1-213ENST00000597325 GADD45AP24522 165 aa10.35□□□□□ -0.75
SHKBP1-213ENST00000597325 SPOCK1Q08629 439 aa10.35□□□□□ -0.75
SHKBP1-213ENST00000597325 NCMAPQ5T1S8 102 aa10.35□□□□□ -0.75
SHKBP1-213ENST00000597325 GPR107Q5VW38 600 aa10.35□□□□□ -0.75
SHKBP1-213ENST00000597325 SLC22A25Q6T423 547 aa10.35□□□□□ -0.75
SHKBP1-213ENST00000597325 PGAP1Q75T13 922 aa10.35□□□□□ -0.75
SHKBP1-213ENST00000597325 CLVS1Q8IUQ0 354 aaPredicted RBP10.35□□□□□ -0.75
SHKBP1-213ENST00000597325 OR2AE1Q8NHA4 323 aa10.35□□□□□ -0.75
SHKBP1-213ENST00000597325 PPP1R14AQ96A00 147 aa10.35□□□□□ -0.75
SHKBP1-213ENST00000597325 PERPQ96FX8 193 aa10.35□□□□□ -0.75
SHKBP1-213ENST00000597325 FUNDC2Q9BWH2 189 aa10.35□□□□□ -0.75
SHKBP1-213ENST00000597325 TUBG2Q9NRH3 451 aa10.35□□□□□ -0.75
SHKBP1-213ENST00000597325 ZNF319Q9P2F9 582 aa10.35□□□□□ -0.75
SHKBP1-213ENST00000597325 SSR3Q9UNL2 185 aa10.35□□□□□ -0.75
SHKBP1-213ENST00000597325 DHDHQ9UQ10 334 aa10.35□□□□□ -0.75
SHKBP1-213ENST00000597325 LOC100506127A0A0U1RQW1 187 aa10.34□□□□□ -0.75
SHKBP1-213ENST00000597325 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.34□□□□□ -0.75
SHKBP1-213ENST00000597325 C5orf63A6NC05 138 aa10.34□□□□□ -0.75
SHKBP1-213ENST00000597325 DPRXA6NFQ7 191 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms