RNA–Protein interactions for RNA: ENST00000597172.5

TRIM28-208, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-208ENST00000597172 MAGEB1P43366 347 aa8.11□□□□□ -1.11
TRIM28-208ENST00000597172 SLC6A9P48067 706 aa8.11□□□□□ -1.11
TRIM28-208ENST00000597172 NAAAQ02083 359 aa8.11□□□□□ -1.11
TRIM28-208ENST00000597172 TBC1D28Q2M2D7 210 aa8.11□□□□□ -1.11
TRIM28-208ENST00000597172 ODF4Q2M2E3 257 aa8.11□□□□□ -1.11
TRIM28-208ENST00000597172 BCL2L15Q5TBC7 163 aa8.11□□□□□ -1.11
TRIM28-208ENST00000597172 UNQ9370/PRO34162Q6UXP9 181 aa8.11□□□□□ -1.11
TRIM28-208ENST00000597172 TMEM91Q6ZNR0 172 aa8.11□□□□□ -1.11
TRIM28-208ENST00000597172 SSX8Q7RTT4 187 aa8.11□□□□□ -1.11
TRIM28-208ENST00000597172 ZNF101Q8IZC7 436 aa8.11□□□□□ -1.11
TRIM28-208ENST00000597172 OR10AC1Q8NH08 325 aa8.11□□□□□ -1.11
TRIM28-208ENST00000597172 OR5AK2Q8NH90 309 aa8.11□□□□□ -1.11
TRIM28-208ENST00000597172 ABHD4Q8TB40 342 aa8.11□□□□□ -1.11
TRIM28-208ENST00000597172 OR51E1Q8TCB6 317 aa8.11□□□□□ -1.11
TRIM28-208ENST00000597172 TMEM203Q969S6 136 aa8.11□□□□□ -1.11
TRIM28-208ENST00000597172 PGAM5Q96HS1 289 aa8.11□□□□□ -1.11
TRIM28-208ENST00000597172 DACH2Q96NX9 599 aa8.11□□□□□ -1.11
TRIM28-208ENST00000597172 FUNDC2Q9BWH2 189 aa8.11□□□□□ -1.11
TRIM28-208ENST00000597172 MOV10Q9HCE1 1003 aaKnown RBP8.11□□□□□ -1.11
TRIM28-208ENST00000597172 TBCCD1Q9NVR7 557 aa8.11□□□□□ -1.11
TRIM28-208ENST00000597172 NDUFB11Q9NX14 153 aa8.11□□□□□ -1.11
TRIM28-208ENST00000597172 NDRG3Q9UGV2 375 aa8.11□□□□□ -1.11
TRIM28-208ENST00000597172 GTF2A1LQ9UNN4 478 aa8.11□□□□□ -1.11
TRIM28-208ENST00000597172 PRR14LQ5THK1 2151 aa8.1□□□□□ -1.11
TRIM28-208ENST00000597172 A0A0U1RQV5 110 aa8.1□□□□□ -1.11
TRIM28-208ENST00000597172 A6NHS1 94 aa8.1□□□□□ -1.11
TRIM28-208ENST00000597172 TMEM212A6NML5 194 aa8.1□□□□□ -1.11
TRIM28-208ENST00000597172 H3BSH0 61 aa8.1□□□□□ -1.11
TRIM28-208ENST00000597172 SIAH2O43255 324 aa8.1□□□□□ -1.11
TRIM28-208ENST00000597172 TBX1O43435 398 aa8.1□□□□□ -1.11
TRIM28-208ENST00000597172 GPRIN2O60269 458 aa8.1□□□□□ -1.11
TRIM28-208ENST00000597172 GPX5O75715 221 aa8.1□□□□□ -1.11
TRIM28-208ENST00000597172 SC5DO75845 299 aa8.1□□□□□ -1.11
TRIM28-208ENST00000597172 GADD45AP24522 165 aa8.1□□□□□ -1.11
TRIM28-208ENST00000597172 LOXP28300 417 aaPredicted RBP8.1□□□□□ -1.11
TRIM28-208ENST00000597172 UCP2P55851 309 aa8.1□□□□□ -1.11
TRIM28-208ENST00000597172 FABP5Q01469 135 aa8.1□□□□□ -1.11
TRIM28-208ENST00000597172 DEFA6Q01524 100 aa8.1□□□□□ -1.11
TRIM28-208ENST00000597172 ZNF92Q03936 586 aa8.1□□□□□ -1.11
TRIM28-208ENST00000597172 SPOCK1Q08629 439 aa8.1□□□□□ -1.11
TRIM28-208ENST00000597172 TNK1Q13470 666 aa8.1□□□□□ -1.11
TRIM28-208ENST00000597172 INSL4Q14641 139 aa8.1□□□□□ -1.11
TRIM28-208ENST00000597172 GLYATL3Q5SZD4 288 aa8.1□□□□□ -1.11
TRIM28-208ENST00000597172 NCMAPQ5T1S8 102 aa8.1□□□□□ -1.11
TRIM28-208ENST00000597172 CD200R1LQ6Q8B3 271 aa8.1□□□□□ -1.11
TRIM28-208ENST00000597172 SLC16A12Q6ZSM3 486 aa8.1□□□□□ -1.11
TRIM28-208ENST00000597172 Q6ZSR3 168 aa8.1□□□□□ -1.11
TRIM28-208ENST00000597172 GPR141Q7Z602 305 aa8.1□□□□□ -1.11
TRIM28-208ENST00000597172 ZNF676Q8N7Q3 588 aa8.1□□□□□ -1.11
TRIM28-208ENST00000597172 PLPP7Q8NBV4 271 aa8.1□□□□□ -1.11
TRIM28-208ENST00000597172 MAPK1IP1LQ8NDC0 245 aa8.1□□□□□ -1.11
TRIM28-208ENST00000597172 OR52H1Q8NGJ2 320 aa8.1□□□□□ -1.11
TRIM28-208ENST00000597172 OR51A4Q8NGJ6 313 aa8.1□□□□□ -1.11
TRIM28-208ENST00000597172 OR13C5Q8NGS8 318 aa8.1□□□□□ -1.11
TRIM28-208ENST00000597172 OR2AE1Q8NHA4 323 aa8.1□□□□□ -1.11
TRIM28-208ENST00000597172 SPSB4Q96A44 273 aa8.1□□□□□ -1.11
TRIM28-208ENST00000597172 APOBEC3DQ96AK3 386 aaPredicted RBP8.1□□□□□ -1.11
TRIM28-208ENST00000597172 TRMT61AQ96FX7 289 aaKnown RBP8.1□□□□□ -1.11
TRIM28-208ENST00000597172 TMED9Q9BVK6 235 aa8.1□□□□□ -1.11
TRIM28-208ENST00000597172 NAA50Q9GZZ1 169 aaKnown RBP8.1□□□□□ -1.11
TRIM28-208ENST00000597172 OR10A2Q9H208 303 aa8.1□□□□□ -1.11
TRIM28-208ENST00000597172 OR51E2Q9H255 320 aa8.1□□□□□ -1.11
TRIM28-208ENST00000597172 PPIL3Q9H2H8 161 aaKnown RBP8.1□□□□□ -1.11
TRIM28-208ENST00000597172 MOB1AQ9H8S9 216 aa8.1□□□□□ -1.11
TRIM28-208ENST00000597172 CDH20Q9HBT6 801 aa8.1□□□□□ -1.11
TRIM28-208ENST00000597172 CEPT1Q9Y6K0 416 aa8.1□□□□□ -1.11
TRIM28-208ENST00000597172 TRBV5-5A0A0J9YX44 114 aa8.09□□□□□ -1.11
TRIM28-208ENST00000597172 A8MV72 311 aaPredicted RBP8.09□□□□□ -1.11
TRIM28-208ENST00000597172 DEFB108AA8MXU0 73 aa8.09□□□□□ -1.11
TRIM28-208ENST00000597172 CD5LO43866 347 aa8.09□□□□□ -1.11
TRIM28-208ENST00000597172 LMX1BO60663 402 aa8.09□□□□□ -1.11
TRIM28-208ENST00000597172 FAM157BP0CG42 384 aa8.09□□□□□ -1.11
TRIM28-208ENST00000597172 ACHEP22303 614 aa8.09□□□□□ -1.11
TRIM28-208ENST00000597172 CCL1P22362 96 aa8.09□□□□□ -1.11
TRIM28-208ENST00000597172 NR4A1P22736 598 aa8.09□□□□□ -1.11
TRIM28-208ENST00000597172 PTAFRP25105 342 aa8.09□□□□□ -1.11
TRIM28-208ENST00000597172 GABRA5P31644 462 aa8.09□□□□□ -1.11
TRIM28-208ENST00000597172 THBS2P35442 1172 aa8.09□□□□□ -1.11
TRIM28-208ENST00000597172 ERVS71-1P61550 626 aa8.09□□□□□ -1.11
TRIM28-208ENST00000597172 BSPH1Q075Z2 132 aa8.09□□□□□ -1.11
TRIM28-208ENST00000597172 HLXQ14774 488 aaPredicted RBP8.09□□□□□ -1.11
TRIM28-208ENST00000597172 ACSM3Q53FZ2 586 aa8.09□□□□□ -1.11
TRIM28-208ENST00000597172 YIF1BQ5BJH7 314 aa8.09□□□□□ -1.11
TRIM28-208ENST00000597172 TMEM244Q5VVB8 128 aa8.09□□□□□ -1.11
TRIM28-208ENST00000597172 GPR107Q5VW38 600 aa8.09□□□□□ -1.11
TRIM28-208ENST00000597172 ZNF544Q6NX49 715 aa8.09□□□□□ -1.11
TRIM28-208ENST00000597172 C12orf54Q6X4T0 127 aa8.09□□□□□ -1.11
TRIM28-208ENST00000597172 ZNF704Q6ZNC4 412 aaPredicted RBP8.09□□□□□ -1.11
TRIM28-208ENST00000597172 RFPL4BQ6ZWI9 263 aa8.09□□□□□ -1.11
TRIM28-208ENST00000597172 ANKRD13BQ86YJ7 626 aa8.09□□□□□ -1.11
TRIM28-208ENST00000597172 MS4A15Q8N5U1 240 aa8.09□□□□□ -1.11
TRIM28-208ENST00000597172 OR14K1Q8NGZ2 314 aa8.09□□□□□ -1.11
TRIM28-208ENST00000597172 SGMS2Q8NHU3 365 aa8.09□□□□□ -1.11
TRIM28-208ENST00000597172 RPL3LQ92901 407 aaKnown RBP8.09□□□□□ -1.11
TRIM28-208ENST00000597172 PLPPR2Q96GM1 343 aa8.09□□□□□ -1.11
TRIM28-208ENST00000597172 REEP6Q96HR9 211 aa8.09□□□□□ -1.11
TRIM28-208ENST00000597172 RBM38Q9H0Z9 239 aaKnown RBP8.09□□□□□ -1.11
TRIM28-208ENST00000597172 OR51B6Q9H340 312 aa8.09□□□□□ -1.11
TRIM28-208ENST00000597172 SP140LQ9H930 580 aa8.09□□□□□ -1.11
TRIM28-208ENST00000597172 GPR84Q9NQS5 396 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms