RNA–Protein interactions for RNA: ENST00000597136.1

TRIM28-207, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 1,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-207ENST00000597136 OR1J1Q8NGS3 322 aa12.85□□□□□ -0.35
TRIM28-207ENST00000597136 MBD6Q96DN6 1003 aa12.85□□□□□ -0.35
TRIM28-207ENST00000597136 YIPF6Q96EC8 236 aa12.85□□□□□ -0.35
TRIM28-207ENST00000597136 SYT3Q9BQG1 590 aa12.85□□□□□ -0.35
TRIM28-207ENST00000597136 EDARQ9UNE0 448 aa12.85□□□□□ -0.35
TRIM28-207ENST00000597136 ZNF281Q9Y2X9 895 aa12.85□□□□□ -0.35
TRIM28-207ENST00000597136 STARD10Q9Y365 291 aa12.85□□□□□ -0.35
TRIM28-207ENST00000597136 SF3B6Q9Y3B4 125 aaKnown RBP12.85□□□□□ -0.35
TRIM28-207ENST00000597136 CMAHPQ9Y471 501 aa12.85□□□□□ -0.35
TRIM28-207ENST00000597136 F8P00451 2351 aa12.84□□□□□ -0.35
TRIM28-207ENST00000597136 A0A0U1RQV5 110 aa12.84□□□□□ -0.35
TRIM28-207ENST00000597136 ISG15P05161 165 aa12.84□□□□□ -0.35
TRIM28-207ENST00000597136 UBCP0CG48 685 aaKnown RBP12.84□□□□□ -0.35
TRIM28-207ENST00000597136 GABRA5P31644 462 aa12.84□□□□□ -0.35
TRIM28-207ENST00000597136 RAD52P43351 418 aa12.84□□□□□ -0.35
TRIM28-207ENST00000597136 RPS25P62851 125 aaKnown RBP12.84□□□□□ -0.35
TRIM28-207ENST00000597136 ABHD4Q8TB40 342 aa12.84□□□□□ -0.35
TRIM28-207ENST00000597136 SLC25A40Q8TBP6 338 aa12.84□□□□□ -0.35
TRIM28-207ENST00000597136 OR51E1Q8TCB6 317 aa12.84□□□□□ -0.35
TRIM28-207ENST00000597136 RGP1Q92546 391 aaPredicted RBP12.84□□□□□ -0.35
TRIM28-207ENST00000597136 TMEM203Q969S6 136 aa12.84□□□□□ -0.35
TRIM28-207ENST00000597136 MRPL24Q96A35 216 aaKnown RBP12.84□□□□□ -0.35
TRIM28-207ENST00000597136 SGK3Q96BR1 496 aa12.84□□□□□ -0.35
TRIM28-207ENST00000597136 PERPQ96FX8 193 aa12.84□□□□□ -0.35
TRIM28-207ENST00000597136 TMED9Q9BVK6 235 aa12.84□□□□□ -0.35
TRIM28-207ENST00000597136 CACNG6Q9BXT2 260 aa12.84□□□□□ -0.35
TRIM28-207ENST00000597136 COMMD4Q9H0A8 199 aa12.84□□□□□ -0.35
TRIM28-207ENST00000597136 FAIMQ9NVQ4 179 aa12.84□□□□□ -0.35
TRIM28-207ENST00000597136 DUSP13Q9UII6 198 aa12.84□□□□□ -0.35
TRIM28-207ENST00000597136 A0A1B0GTI1 187 aa12.83□□□□□ -0.36
TRIM28-207ENST00000597136 J3QW42 95 aa12.83□□□□□ -0.36
TRIM28-207ENST00000597136 P2RY10O00398 339 aa12.83□□□□□ -0.36
TRIM28-207ENST00000597136 IGLV3-1P01715 115 aa12.83□□□□□ -0.36
TRIM28-207ENST00000597136 MPV17P39210 176 aa12.83□□□□□ -0.36
TRIM28-207ENST00000597136 ART1P52961 327 aa12.83□□□□□ -0.36
TRIM28-207ENST00000597136 PPP1CBP62140 327 aa12.83□□□□□ -0.36
TRIM28-207ENST00000597136 RPS11P62280 158 aaKnown RBP eCLIP12.83□□□□□ -0.36
TRIM28-207ENST00000597136 GLYATL3Q5SZD4 288 aa12.83□□□□□ -0.36
TRIM28-207ENST00000597136 TMEM244Q5VVB8 128 aa12.83□□□□□ -0.36
TRIM28-207ENST00000597136 RGS7BPQ6MZT1 257 aaPredicted RBP12.83□□□□□ -0.36
TRIM28-207ENST00000597136 MS4A15Q8N5U1 240 aa12.83□□□□□ -0.36
TRIM28-207ENST00000597136 OR10AC1Q8NH08 325 aa12.83□□□□□ -0.36
TRIM28-207ENST00000597136 MARS2Q96GW9 593 aaKnown RBP12.83□□□□□ -0.36
TRIM28-207ENST00000597136 LYZL4Q96KX0 146 aa12.83□□□□□ -0.36
TRIM28-207ENST00000597136 BCL2L14Q9BZR8 327 aa12.83□□□□□ -0.36
TRIM28-207ENST00000597136 OR2J1Q9GZK6 312 aa12.83□□□□□ -0.36
TRIM28-207ENST00000597136 PLK3Q9H4B4 646 aa12.83□□□□□ -0.36
TRIM28-207ENST00000597136 TANC2Q9HCD6 1990 aa12.83□□□□□ -0.36
TRIM28-207ENST00000597136 DOCK11Q5JSL3 2073 aa12.82□□□□□ -0.36
TRIM28-207ENST00000597136 LOC107986453A0A1B0GWG9 222 aa12.82□□□□□ -0.36
TRIM28-207ENST00000597136 B9A039 149 aa12.82□□□□□ -0.36
TRIM28-207ENST00000597136 ZNF250P15622 560 aa12.82□□□□□ -0.36
TRIM28-207ENST00000597136 PTH2RP49190 550 aa12.82□□□□□ -0.36
TRIM28-207ENST00000597136 EFNB3Q15768 340 aa12.82□□□□□ -0.36
TRIM28-207ENST00000597136 GFOD2Q3B7J2 385 aa12.82□□□□□ -0.36
TRIM28-207ENST00000597136 ALKBH6Q3KRA9 238 aa12.82□□□□□ -0.36
TRIM28-207ENST00000597136 YIF1BQ5BJH7 314 aa12.82□□□□□ -0.36
TRIM28-207ENST00000597136 OR5L1Q8NGL2 311 aa12.82□□□□□ -0.36
TRIM28-207ENST00000597136 OR2AE1Q8NHA4 323 aa12.82□□□□□ -0.36
TRIM28-207ENST00000597136 SPSB4Q96A44 273 aa12.82□□□□□ -0.36
TRIM28-207ENST00000597136 REEP6Q96HR9 211 aa12.82□□□□□ -0.36
TRIM28-207ENST00000597136 FUNDC2Q9BWH2 189 aa12.82□□□□□ -0.36
TRIM28-207ENST00000597136 RGCCQ9H4X1 137 aa12.82□□□□□ -0.36
TRIM28-207ENST00000597136 GPR84Q9NQS5 396 aa12.82□□□□□ -0.36
TRIM28-207ENST00000597136 ZNF701Q9NV72 531 aaPredicted RBP12.82□□□□□ -0.36
TRIM28-207ENST00000597136 BEX4Q9NWD9 120 aaPredicted RBP12.82□□□□□ -0.36
TRIM28-207ENST00000597136 ZNF391Q9UJN7 358 aa12.82□□□□□ -0.36
TRIM28-207ENST00000597136 TLN2Q9Y4G6 2542 aa12.82□□□□□ -0.36
TRIM28-207ENST00000597136 H3BSH0 61 aa12.81□□□□□ -0.36
TRIM28-207ENST00000597136 XRCC2O43543 280 aa12.81□□□□□ -0.36
TRIM28-207ENST00000597136 ACHEP22303 614 aa12.81□□□□□ -0.36
TRIM28-207ENST00000597136 CCL1P22362 96 aa12.81□□□□□ -0.36
TRIM28-207ENST00000597136 GADD45AP24522 165 aa12.81□□□□□ -0.36
TRIM28-207ENST00000597136 PSMA1P25786 263 aaKnown RBP12.81□□□□□ -0.36
TRIM28-207ENST00000597136 CRYBB2P43320 205 aa12.81□□□□□ -0.36
TRIM28-207ENST00000597136 ZNF92Q03936 586 aa12.81□□□□□ -0.36
TRIM28-207ENST00000597136 MALLQ13021 153 aa12.81□□□□□ -0.36
TRIM28-207ENST00000597136 TRAM1Q15629 374 aa12.81□□□□□ -0.36
TRIM28-207ENST00000597136 CD200R1LQ6Q8B3 271 aa12.81□□□□□ -0.36
TRIM28-207ENST00000597136 UNQ6126/PRO20091Q6UXV3 157 aa12.81□□□□□ -0.36
TRIM28-207ENST00000597136 OR51A4Q8NGJ6 313 aa12.81□□□□□ -0.36
TRIM28-207ENST00000597136 OR13C5Q8NGS8 318 aa12.81□□□□□ -0.36
TRIM28-207ENST00000597136 SYNPRQ8TBG9 265 aa12.81□□□□□ -0.36
TRIM28-207ENST00000597136 KLF14Q8TD94 323 aaPredicted RBP12.81□□□□□ -0.36
TRIM28-207ENST00000597136 GPR148Q8TDV2 347 aa12.81□□□□□ -0.36
TRIM28-207ENST00000597136 SOX7Q9BT81 388 aa12.81□□□□□ -0.36
TRIM28-207ENST00000597136 CXorf56Q9H5V9 222 aa12.81□□□□□ -0.36
TRIM28-207ENST00000597136 HHLA2Q9UM44 414 aa12.81□□□□□ -0.36
TRIM28-207ENST00000597136 A0A1B0GVI7 797 aa12.81□□□□□ -0.36
TRIM28-207ENST00000597136 VSTM5A8MXK1 200 aa12.81□□□□□ -0.36
TRIM28-207ENST00000597136 SYT7O43581 403 aa12.81□□□□□ -0.36
TRIM28-207ENST00000597136 LY6HO94772 140 aa12.81□□□□□ -0.36
TRIM28-207ENST00000597136 HLA-DPB1P04440 258 aa12.81□□□□□ -0.36
TRIM28-207ENST00000597136 ALDH3B1P43353 468 aa12.81□□□□□ -0.36
TRIM28-207ENST00000597136 RPS23P62266 143 aaKnown RBP12.81□□□□□ -0.36
TRIM28-207ENST00000597136 FABP5Q01469 135 aa12.81□□□□□ -0.36
TRIM28-207ENST00000597136 GK2Q14410 553 aaPredicted RBP12.81□□□□□ -0.36
TRIM28-207ENST00000597136 INSL4Q14641 139 aa12.81□□□□□ -0.36
TRIM28-207ENST00000597136 HLXQ14774 488 aaPredicted RBP12.81□□□□□ -0.36
TRIM28-207ENST00000597136 TESK1Q15569 626 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms