RNA–Protein interactions for RNA: ENST00000596332.1

LIG1-210, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-210ENST00000596332 ALKBH1Q13686 389 aaKnown RBP8.97□□□□□ -0.97
LIG1-210ENST00000596332 ZNF829Q3KNS6 432 aaPredicted RBP8.97□□□□□ -0.97
LIG1-210ENST00000596332 RBM48Q5RL73 367 aaKnown RBP8.97□□□□□ -0.97
LIG1-210ENST00000596332 TMEM42Q69YG0 159 aa8.97□□□□□ -0.97
LIG1-210ENST00000596332 ASPHD2Q6ICH7 369 aa8.97□□□□□ -0.97
LIG1-210ENST00000596332 CRIP3Q6Q6R5 217 aa8.97□□□□□ -0.97
LIG1-210ENST00000596332 UNQ6126/PRO20091Q6UXV3 157 aa8.97□□□□□ -0.97
LIG1-210ENST00000596332 WDR86Q86TI4 376 aa8.97□□□□□ -0.97
LIG1-210ENST00000596332 C11orf53Q8IXP5 236 aa8.97□□□□□ -0.97
LIG1-210ENST00000596332 OR51A4Q8NGJ6 313 aa8.97□□□□□ -0.97
LIG1-210ENST00000596332 OR52N1Q8NH53 320 aa8.97□□□□□ -0.97
LIG1-210ENST00000596332 YIPF5Q969M3 257 aa8.97□□□□□ -0.97
LIG1-210ENST00000596332 OR10A2Q9H208 303 aa8.97□□□□□ -0.97
LIG1-210ENST00000596332 TPK1Q9H3S4 243 aa8.97□□□□□ -0.97
LIG1-210ENST00000596332 MS4A5Q9H3V2 200 aa8.97□□□□□ -0.97
LIG1-210ENST00000596332 RGCCQ9H4X1 137 aa8.97□□□□□ -0.97
LIG1-210ENST00000596332 MYO9AB2RTY4 2548 aa8.97□□□□□ -0.97
LIG1-210ENST00000596332 A0A096LNT2 108 aa8.96□□□□□ -0.98
LIG1-210ENST00000596332 LOC100289279A0A1B0GTE1 492 aa8.96□□□□□ -0.98
LIG1-210ENST00000596332 IRGMA1A4Y4 181 aa8.96□□□□□ -0.98
LIG1-210ENST00000596332 VSTM5A8MXK1 200 aa8.96□□□□□ -0.98
LIG1-210ENST00000596332 RP2O75695 350 aa8.96□□□□□ -0.98
LIG1-210ENST00000596332 HLA-DPB1P04440 258 aa8.96□□□□□ -0.98
LIG1-210ENST00000596332 TACSTD2P09758 323 aa8.96□□□□□ -0.98
LIG1-210ENST00000596332 SELEP16581 610 aa8.96□□□□□ -0.98
LIG1-210ENST00000596332 PCMT1P22061 227 aa8.96□□□□□ -0.98
LIG1-210ENST00000596332 CA6P23280 308 aa8.96□□□□□ -0.98
LIG1-210ENST00000596332 MAP2K4P45985 399 aa8.96□□□□□ -0.98
LIG1-210ENST00000596332 EFNA4P52798 201 aa8.96□□□□□ -0.98
LIG1-210ENST00000596332 SNRPD2P62316 118 aaKnown RBP8.96□□□□□ -0.98
LIG1-210ENST00000596332 ACTA2P62736 377 aa8.96□□□□□ -0.98
LIG1-210ENST00000596332 ACTG2P63267 376 aa8.96□□□□□ -0.98
LIG1-210ENST00000596332 ACSM1Q08AH1 577 aa8.96□□□□□ -0.98
LIG1-210ENST00000596332 MALLQ13021 153 aa8.96□□□□□ -0.98
LIG1-210ENST00000596332 DMKNQ6E0U4 476 aaPredicted RBP8.96□□□□□ -0.98
LIG1-210ENST00000596332 PRSS48Q7RTY5 328 aa8.96□□□□□ -0.98
LIG1-210ENST00000596332 MRPL21Q7Z2W9 205 aaKnown RBP8.96□□□□□ -0.98
LIG1-210ENST00000596332 KLBQ86Z14 1044 aa8.96□□□□□ -0.98
LIG1-210ENST00000596332 ZNF786Q8N393 782 aa8.96□□□□□ -0.98
LIG1-210ENST00000596332 BHLHE23Q8NDY6 225 aa8.96□□□□□ -0.98
LIG1-210ENST00000596332 UBASH3BQ8TF42 649 aa8.96□□□□□ -0.98
LIG1-210ENST00000596332 PERPQ96FX8 193 aa8.96□□□□□ -0.98
LIG1-210ENST00000596332 PGLYRP3Q96LB9 341 aa8.96□□□□□ -0.98
LIG1-210ENST00000596332 MOB1AQ9H8S9 216 aa8.96□□□□□ -0.98
LIG1-210ENST00000596332 SP140LQ9H930 580 aa8.96□□□□□ -0.98
LIG1-210ENST00000596332 DCAF16Q9NXF7 216 aa8.96□□□□□ -0.98
LIG1-210ENST00000596332 TPRKBQ9Y3C4 175 aa8.96□□□□□ -0.98
LIG1-210ENST00000596332 CACNG2Q9Y698 323 aa8.96□□□□□ -0.98
LIG1-210ENST00000596332 PMF1-BGLAPU3KQ54 211 aa8.96□□□□□ -0.98
LIG1-210ENST00000596332 A0A1W2PPW3 197 aa8.95□□□□□ -0.98
LIG1-210ENST00000596332 VWC2LB2RUY7 222 aa8.95□□□□□ -0.98
LIG1-210ENST00000596332 H3BSH0 61 aa8.95□□□□□ -0.98
LIG1-210ENST00000596332 SPRY3O43610 288 aa8.95□□□□□ -0.98
LIG1-210ENST00000596332 TIMM8AO60220 97 aaPredicted RBP8.95□□□□□ -0.98
LIG1-210ENST00000596332 CST4P01036 141 aa8.95□□□□□ -0.98
LIG1-210ENST00000596332 MT-ND5P03915 603 aa8.95□□□□□ -0.98
LIG1-210ENST00000596332 DDOSTP39656 456 aa8.95□□□□□ -0.98
LIG1-210ENST00000596332 CDH15P55291 814 aa8.95□□□□□ -0.98
LIG1-210ENST00000596332 CCL8P80075 99 aa8.95□□□□□ -0.98
LIG1-210ENST00000596332 HOXA4Q00056 320 aaPredicted RBP8.95□□□□□ -0.98
LIG1-210ENST00000596332 MED21Q13503 144 aa8.95□□□□□ -0.98
LIG1-210ENST00000596332 CDK5R1Q15078 307 aa8.95□□□□□ -0.98
LIG1-210ENST00000596332 TIGD6Q17RP2 521 aa8.95□□□□□ -0.98
LIG1-210ENST00000596332 NKPD1Q17RQ9 610 aa8.95□□□□□ -0.98
LIG1-210ENST00000596332 ODF4Q2M2E3 257 aa8.95□□□□□ -0.98
LIG1-210ENST00000596332 GFOD2Q3B7J2 385 aa8.95□□□□□ -0.98
LIG1-210ENST00000596332 FAM76BQ5HYJ3 339 aa8.95□□□□□ -0.98
LIG1-210ENST00000596332 DMRTC1Q5HYR2 192 aa8.95□□□□□ -0.98
LIG1-210ENST00000596332 BCL2L15Q5TBC7 163 aa8.95□□□□□ -0.98
LIG1-210ENST00000596332 RNF144BQ7Z419 303 aa8.95□□□□□ -0.98
LIG1-210ENST00000596332 STX19Q8N4C7 294 aa8.95□□□□□ -0.98
LIG1-210ENST00000596332 KLHL36Q8N4N3 616 aa8.95□□□□□ -0.98
LIG1-210ENST00000596332 ZFP41Q8N8Y5 198 aa8.95□□□□□ -0.98
LIG1-210ENST00000596332 WFDC11Q8NEX6 87 aa8.95□□□□□ -0.98
LIG1-210ENST00000596332 OR10AD1Q8NGE0 317 aa8.95□□□□□ -0.98
LIG1-210ENST00000596332 HPSE2Q8WWQ2 592 aa8.95□□□□□ -0.98
LIG1-210ENST00000596332 DVL3Q92997 716 aaPredicted RBP8.95□□□□□ -0.98
LIG1-210ENST00000596332 ITPKCQ96DU7 683 aa8.95□□□□□ -0.98
LIG1-210ENST00000596332 ADAT3Q96EY9 351 aaPredicted RBP8.95□□□□□ -0.98
LIG1-210ENST00000596332 FAM71F1Q96KD3 344 aaPredicted RBP8.95□□□□□ -0.98
LIG1-210ENST00000596332 VRK1Q99986 396 aaPredicted RBP8.95□□□□□ -0.98
LIG1-210ENST00000596332 PDCD1LG2Q9BQ51 273 aa8.95□□□□□ -0.98
LIG1-210ENST00000596332 YTHDF1Q9BYJ9 559 aaKnown RBP8.95□□□□□ -0.98
LIG1-210ENST00000596332 CXorf56Q9H5V9 222 aa8.95□□□□□ -0.98
LIG1-210ENST00000596332 TMEM100Q9NV29 134 aa8.95□□□□□ -0.98
LIG1-210ENST00000596332 SCN3BQ9NY72 215 aa8.95□□□□□ -0.98
LIG1-210ENST00000596332 MRPL15Q9P015 296 aaKnown RBP8.95□□□□□ -0.98
LIG1-210ENST00000596332 CGGBP1Q9UFW8 167 aaPredicted RBP8.95□□□□□ -0.98
LIG1-210ENST00000596332 ZNF391Q9UJN7 358 aa8.95□□□□□ -0.98
LIG1-210ENST00000596332 CHD3Q12873 2000 aaKnown RBP8.94□□□□□ -0.98
LIG1-210ENST00000596332 IGKV1-9A0A0C4DH69 117 aa8.94□□□□□ -0.98
LIG1-210ENST00000596332 LOC107986453A0A1B0GWG9 222 aa8.94□□□□□ -0.98
LIG1-210ENST00000596332 GGT3PA6NGU5 568 aa8.94□□□□□ -0.98
LIG1-210ENST00000596332 A6NIN4 97 aa8.94□□□□□ -0.98
LIG1-210ENST00000596332 F5H5P2 479 aa8.94□□□□□ -0.98
LIG1-210ENST00000596332 RGS10O43665 173 aa8.94□□□□□ -0.98
LIG1-210ENST00000596332 PLPP2O43688 288 aa8.94□□□□□ -0.98
LIG1-210ENST00000596332 DHRS3O75911 302 aa8.94□□□□□ -0.98
LIG1-210ENST00000596332 ATP6V1B1P15313 513 aa8.94□□□□□ -0.98
LIG1-210ENST00000596332 FAHP16930 419 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms