RNA–Protein interactions for RNA: ENST00000596163.5

SHKBP1-212, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-212ENST00000596163 R4GMQ9 66 aa14.6□□□□□ -0.07
SHKBP1-212ENST00000596163 CSPG4Q6UVK1 2322 aa14.59□□□□□ -0.07
SHKBP1-212ENST00000596163 ISPDA4D126 451 aa14.59□□□□□ -0.07
SHKBP1-212ENST00000596163 METTL15A6NJ78 407 aa14.59□□□□□ -0.07
SHKBP1-212ENST00000596163 B4DSR2 109 aa14.59□□□□□ -0.07
SHKBP1-212ENST00000596163 LOC110117498-PIK3R3F6TDL0 507 aa14.59□□□□□ -0.07
SHKBP1-212ENST00000596163 ANOS1P23352 680 aa14.59□□□□□ -0.07
SHKBP1-212ENST00000596163 MAP2K3P46734 347 aa14.59□□□□□ -0.07
SHKBP1-212ENST00000596163 CDH15P55291 814 aa14.59□□□□□ -0.07
SHKBP1-212ENST00000596163 MAB21L1Q13394 359 aa14.59□□□□□ -0.07
SHKBP1-212ENST00000596163 OR8B8Q15620 311 aa14.59□□□□□ -0.07
SHKBP1-212ENST00000596163 LPCAT4Q643R3 524 aa14.59□□□□□ -0.07
SHKBP1-212ENST00000596163 MOGAT3Q86VF5 341 aa14.59□□□□□ -0.07
SHKBP1-212ENST00000596163 ENTHD1Q8IYW4 607 aa14.59□□□□□ -0.07
SHKBP1-212ENST00000596163 GAL3ST1Q99999 423 aa14.59□□□□□ -0.07
SHKBP1-212ENST00000596163 VCXQ9H320 206 aa14.59□□□□□ -0.07
SHKBP1-212ENST00000596163 FN3KRPQ9HA64 309 aa14.59□□□□□ -0.07
SHKBP1-212ENST00000596163 NUFIP1Q9UHK0 495 aaKnown RBP14.59□□□□□ -0.07
SHKBP1-212ENST00000596163 MRM2Q9UI43 246 aaKnown RBP14.59□□□□□ -0.07
SHKBP1-212ENST00000596163 MPC1Q9Y5U8 109 aa14.59□□□□□ -0.07
SHKBP1-212ENST00000596163 SNX5Q9Y5X3 404 aa14.59□□□□□ -0.07
SHKBP1-212ENST00000596163 HIVEP2P31629 2446 aa14.58□□□□□ -0.07
SHKBP1-212ENST00000596163 A0A1W2PQL4 384 aaPredicted RBP14.58□□□□□ -0.08
SHKBP1-212ENST00000596163 ERICH4A6NGS2 130 aa14.58□□□□□ -0.08
SHKBP1-212ENST00000596163 ANXA2P2A6NMY6 339 aa14.58□□□□□ -0.08
SHKBP1-212ENST00000596163 INAFM1C9JVW0 142 aa14.58□□□□□ -0.08
SHKBP1-212ENST00000596163 TMEM178BH3BS89 294 aa14.58□□□□□ -0.08
SHKBP1-212ENST00000596163 LMX1BO60663 402 aa14.58□□□□□ -0.08
SHKBP1-212ENST00000596163 MTRF1O75570 445 aaKnown RBP14.58□□□□□ -0.08
SHKBP1-212ENST00000596163 ZNF16P17020 682 aaPredicted RBP14.58□□□□□ -0.08
SHKBP1-212ENST00000596163 PCMT1P22061 227 aa14.58□□□□□ -0.08
SHKBP1-212ENST00000596163 IL2RGP31785 369 aa14.58□□□□□ -0.08
SHKBP1-212ENST00000596163 LMO4P61968 165 aa14.58□□□□□ -0.08
SHKBP1-212ENST00000596163 ELF3P78545 371 aaPredicted RBP14.58□□□□□ -0.08
SHKBP1-212ENST00000596163 BCL2L15Q5TBC7 163 aa14.58□□□□□ -0.08
SHKBP1-212ENST00000596163 FAM220AQ7Z4H9 259 aa14.58□□□□□ -0.08
SHKBP1-212ENST00000596163 KCTD20Q7Z5Y7 419 aa14.58□□□□□ -0.08
SHKBP1-212ENST00000596163 COMMD2Q86X83 199 aa14.58□□□□□ -0.08
SHKBP1-212ENST00000596163 MUC20Q8N307 709 aaPredicted RBP14.58□□□□□ -0.08
SHKBP1-212ENST00000596163 SPICQ8N5J4 248 aa14.58□□□□□ -0.08
SHKBP1-212ENST00000596163 SIGLEC11Q96RL6 698 aa14.58□□□□□ -0.08
SHKBP1-212ENST00000596163 ZNF665Q9H7R5 613 aa14.58□□□□□ -0.08
SHKBP1-212ENST00000596163 TMEM160Q9NX00 188 aa14.58□□□□□ -0.08
SHKBP1-212ENST00000596163 PCDHB10Q9UN67 800 aa14.58□□□□□ -0.08
SHKBP1-212ENST00000596163 GTF2A1LQ9UNN4 478 aa14.58□□□□□ -0.08
SHKBP1-212ENST00000596163 DAPL1A0PJW8 107 aa14.57□□□□□ -0.08
SHKBP1-212ENST00000596163 PRR32B1ATL7 298 aa14.57□□□□□ -0.08
SHKBP1-212ENST00000596163 WNT9BO14905 357 aa14.57□□□□□ -0.08
SHKBP1-212ENST00000596163 CASQ2O14958 399 aaPredicted RBP14.57□□□□□ -0.08
SHKBP1-212ENST00000596163 APOL3O95236 402 aa14.57□□□□□ -0.08
SHKBP1-212ENST00000596163 PTBP3O95758 552 aaKnown RBP14.57□□□□□ -0.08
SHKBP1-212ENST00000596163 GABRB1P18505 474 aa14.57□□□□□ -0.08
SHKBP1-212ENST00000596163 PEX2P28328 305 aa14.57□□□□□ -0.08
SHKBP1-212ENST00000596163 MDH2P40926 338 aaKnown RBP14.57□□□□□ -0.08
SHKBP1-212ENST00000596163 BTG1P62324 171 aa14.57□□□□□ -0.08
SHKBP1-212ENST00000596163 IL5RAQ01344 420 aa14.57□□□□□ -0.08
SHKBP1-212ENST00000596163 TMEM155Q4W5P6 130 aa14.57□□□□□ -0.08
SHKBP1-212ENST00000596163 LRRC28Q86X40 367 aaPredicted RBP14.57□□□□□ -0.08
SHKBP1-212ENST00000596163 KLHL36Q8N4N3 616 aa14.57□□□□□ -0.08
SHKBP1-212ENST00000596163 DHRSXQ8N5I4 330 aa14.57□□□□□ -0.08
SHKBP1-212ENST00000596163 RFLNBQ8N5W9 214 aa14.57□□□□□ -0.08
SHKBP1-212ENST00000596163 SETD9Q8NE22 299 aa14.57□□□□□ -0.08
SHKBP1-212ENST00000596163 Q8TCH9 128 aa14.57□□□□□ -0.08
SHKBP1-212ENST00000596163 HIST1H2AAQ96QV6 131 aa14.57□□□□□ -0.08
SHKBP1-212ENST00000596163 MICU1Q9BPX6 476 aa14.57□□□□□ -0.08
SHKBP1-212ENST00000596163 PAPOLGQ9BWT3 736 aaKnown RBP14.57□□□□□ -0.08
SHKBP1-212ENST00000596163 OR52A1Q9UKL2 312 aa14.57□□□□□ -0.08
SHKBP1-212ENST00000596163 EXOGQ9Y2C4 368 aaKnown RBP14.57□□□□□ -0.08
SHKBP1-212ENST00000596163 RHBDD3Q9Y3P4 386 aa14.57□□□□□ -0.08
SHKBP1-212ENST00000596163 RPL36Q9Y3U8 105 aaKnown RBP14.57□□□□□ -0.08
SHKBP1-212ENST00000596163 MAGEB4O15481 346 aaPredicted RBP14.56□□□□□ -0.08
SHKBP1-212ENST00000596163 FSTL3O95633 263 aa14.56□□□□□ -0.08
SHKBP1-212ENST00000596163 FADS2O95864 444 aaKnown RBP14.56□□□□□ -0.08
SHKBP1-212ENST00000596163 CST4P01036 141 aa14.56□□□□□ -0.08
SHKBP1-212ENST00000596163 IGHV2-70P01814 119 aa14.56□□□□□ -0.08
SHKBP1-212ENST00000596163 CPT2P23786 658 aa14.56□□□□□ -0.08
SHKBP1-212ENST00000596163 RIPPLY1Q0D2K3 151 aa14.56□□□□□ -0.08
SHKBP1-212ENST00000596163 KLHL22Q53GT1 634 aa14.56□□□□□ -0.08
SHKBP1-212ENST00000596163 OGFRL1Q5TC84 451 aaPredicted RBP14.56□□□□□ -0.08
SHKBP1-212ENST00000596163 THAP5Q7Z6K1 395 aa14.56□□□□□ -0.08
SHKBP1-212ENST00000596163 ELMOD2Q8IZ81 293 aa14.56□□□□□ -0.08
SHKBP1-212ENST00000596163 ACBD7Q8N6N7 88 aa14.56□□□□□ -0.08
SHKBP1-212ENST00000596163 SEMA6DQ8NFY4 1073 aa14.56□□□□□ -0.08
SHKBP1-212ENST00000596163 OR51F2Q8NH61 342 aa14.56□□□□□ -0.08
SHKBP1-212ENST00000596163 ZNF420Q8TAQ5 688 aaPredicted RBP14.56□□□□□ -0.08
SHKBP1-212ENST00000596163 OR51E1Q8TCB6 317 aa14.56□□□□□ -0.08
SHKBP1-212ENST00000596163 CYGBQ8WWM9 190 aa14.56□□□□□ -0.08
SHKBP1-212ENST00000596163 LYZL4Q96KX0 146 aa14.56□□□□□ -0.08
SHKBP1-212ENST00000596163 GPR84Q9NQS5 396 aa14.56□□□□□ -0.08
SHKBP1-212ENST00000596163 UBAP1Q9NZ09 502 aa14.56□□□□□ -0.08
SHKBP1-212ENST00000596163 RNF7Q9UBF6 113 aa14.56□□□□□ -0.08
SHKBP1-212ENST00000596163 LPAR3Q9UBY5 353 aa14.56□□□□□ -0.08
SHKBP1-212ENST00000596163 CR1P17927 2039 aa14.56□□□□□ -0.08
SHKBP1-212ENST00000596163 SETD2Q9BYW2 2564 aaPredicted RBP14.55□□□□□ -0.08
SHKBP1-212ENST00000596163 CHD3Q12873 2000 aaKnown RBP14.55□□□□□ -0.08
SHKBP1-212ENST00000596163 PPIAL4EA0A075B759 164 aa14.55□□□□□ -0.08
SHKBP1-212ENST00000596163 IGHV3-64DA0A0J9YX35 117 aa14.55□□□□□ -0.08
SHKBP1-212ENST00000596163 ZNF816-ZNF321PA0A0X1KG74 233 aa14.55□□□□□ -0.08
SHKBP1-212ENST00000596163 PPIAL4DF5H284 164 aa14.55□□□□□ -0.08
SHKBP1-212ENST00000596163 DLGAP1O14490 977 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms