RNA–Protein interactions for RNA: ENST00000594661.5

PNKP-204, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 2,111 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-204ENST00000594661 COMMD9Q9P000 198 aa13.67□□□□□ -0.22
PNKP-204ENST00000594661 GRHPRQ9UBQ7 328 aa13.67□□□□□ -0.22
PNKP-204ENST00000594661 TMED7Q9Y3B3 224 aa13.67□□□□□ -0.22
PNKP-204ENST00000594661 HS3ST3B1Q9Y662 390 aa13.67□□□□□ -0.22
PNKP-204ENST00000594661 TRBV2A0A0J9YWF9 115 aa13.67□□□□□ -0.22
PNKP-204ENST00000594661 hCG_1809904A0A1W2PP81 198 aa13.67□□□□□ -0.22
PNKP-204ENST00000594661 A0A1W2PPH5 198 aa13.67□□□□□ -0.22
PNKP-204ENST00000594661 A0A1W2PR64 198 aa13.67□□□□□ -0.22
PNKP-204ENST00000594661 A0A1W2PRV1 198 aa13.67□□□□□ -0.22
PNKP-204ENST00000594661 IFNA17P01571 189 aa13.67□□□□□ -0.22
PNKP-204ENST00000594661 COX6A1P12074 109 aa13.67□□□□□ -0.22
PNKP-204ENST00000594661 EDNRAP25101 427 aa13.67□□□□□ -0.22
PNKP-204ENST00000594661 TOMM20Q15388 145 aa13.67□□□□□ -0.22
PNKP-204ENST00000594661 HMGN3Q15651 99 aa13.67□□□□□ -0.22
PNKP-204ENST00000594661 LINC01590Q5TEZ4 76 aa13.67□□□□□ -0.22
PNKP-204ENST00000594661 GRINAQ7Z429 371 aa13.67□□□□□ -0.22
PNKP-204ENST00000594661 CCDC54Q8NEL0 328 aa13.67□□□□□ -0.22
PNKP-204ENST00000594661 OR10G3Q8NGC4 313 aa13.67□□□□□ -0.22
PNKP-204ENST00000594661 OR2Y1Q8NGV0 311 aa13.67□□□□□ -0.22
PNKP-204ENST00000594661 RELTQ969Z4 430 aa13.67□□□□□ -0.22
PNKP-204ENST00000594661 HAVCR1Q96D42 359 aa13.67□□□□□ -0.22
PNKP-204ENST00000594661 SMAD5Q99717 465 aaKnown RBP13.67□□□□□ -0.22
PNKP-204ENST00000594661 FKRPQ9H9S5 495 aa13.67□□□□□ -0.22
PNKP-204ENST00000594661 RPS10P5Q9NQ39 176 aa13.67□□□□□ -0.22
PNKP-204ENST00000594661 ZNF346Q9UL40 294 aaKnown RBP13.67□□□□□ -0.22
PNKP-204ENST00000594661 TRAV36DV7A0A075B6V5 113 aa13.66□□□□□ -0.22
PNKP-204ENST00000594661 A0A1W2PPK0 400 aa13.66□□□□□ -0.22
PNKP-204ENST00000594661 H7C1C5 153 aa13.66□□□□□ -0.22
PNKP-204ENST00000594661 H7C417 338 aa13.66□□□□□ -0.22
PNKP-204ENST00000594661 STK17BO94768 372 aa13.66□□□□□ -0.22
PNKP-204ENST00000594661 YIF1AO95070 293 aa13.66□□□□□ -0.22
PNKP-204ENST00000594661 PSMB10P40306 273 aa13.66□□□□□ -0.22
PNKP-204ENST00000594661 SLC25A1P53007 311 aa13.66□□□□□ -0.22
PNKP-204ENST00000594661 TAS2R20P59543 309 aa13.66□□□□□ -0.22
PNKP-204ENST00000594661 LSM6P62312 80 aaKnown RBP13.66□□□□□ -0.22
PNKP-204ENST00000594661 LCN6P62502 163 aa13.66□□□□□ -0.22
PNKP-204ENST00000594661 INSM1Q01101 510 aaPredicted RBP13.66□□□□□ -0.22
PNKP-204ENST00000594661 C17orf67Q0P5P2 114 aa13.66□□□□□ -0.22
PNKP-204ENST00000594661 PNLIPRP3Q17RR3 467 aa13.66□□□□□ -0.22
PNKP-204ENST00000594661 DCAF12Q5T6F0 453 aa13.66□□□□□ -0.22
PNKP-204ENST00000594661 LIPNQ5VXI9 398 aa13.66□□□□□ -0.22
PNKP-204ENST00000594661 RPL22L1Q6P5R6 122 aaKnown RBP13.66□□□□□ -0.22
PNKP-204ENST00000594661 FCRLAQ7L513 359 aa13.66□□□□□ -0.22
PNKP-204ENST00000594661 NUP54Q7Z3B4 507 aa13.66□□□□□ -0.22
PNKP-204ENST00000594661 GLB1L2Q8IW92 636 aa13.66□□□□□ -0.22
PNKP-204ENST00000594661 CCDC107Q8WV48 283 aa13.66□□□□□ -0.22
PNKP-204ENST00000594661 SAT2Q96F10 170 aaPredicted RBP13.66□□□□□ -0.22
PNKP-204ENST00000594661 TSPAN32Q96QS1 320 aa13.66□□□□□ -0.22
PNKP-204ENST00000594661 RASL10BQ96S79 203 aa13.66□□□□□ -0.22
PNKP-204ENST00000594661 MRI1Q9BV20 369 aa13.66□□□□□ -0.22
PNKP-204ENST00000594661 ZNF700Q9H0M5 742 aa13.66□□□□□ -0.22
PNKP-204ENST00000594661 UNKLQ9H9P5 680 aaKnown RBP13.66□□□□□ -0.22
PNKP-204ENST00000594661 SRA1Q9HD15 236 aaKnown RBP13.66□□□□□ -0.22
PNKP-204ENST00000594661 MYOZ1Q9NP98 299 aaPredicted RBP13.66□□□□□ -0.22
PNKP-204ENST00000594661 FAM86C1Q9NVL1 165 aa13.66□□□□□ -0.22
PNKP-204ENST00000594661 TAS2R8Q9NYW2 309 aa13.66□□□□□ -0.22
PNKP-204ENST00000594661 KLRF1Q9NZS2 232 aa13.66□□□□□ -0.22
PNKP-204ENST00000594661 MTFP1Q9UDX5 166 aa13.66□□□□□ -0.22
PNKP-204ENST00000594661 WASF3Q9UPY6 502 aa13.66□□□□□ -0.22
PNKP-204ENST00000594661 ANKUB1A6NFN9 424 aa13.66□□□□□ -0.22
PNKP-204ENST00000594661 IFITM5A6NNB3 132 aa13.66□□□□□ -0.22
PNKP-204ENST00000594661 PSMD9O00233 223 aa13.66□□□□□ -0.22
PNKP-204ENST00000594661 NPIPB7O75200 414 aa13.66□□□□□ -0.22
PNKP-204ENST00000594661 DKK1O94907 266 aa13.66□□□□□ -0.22
PNKP-204ENST00000594661 CSF1P09603 554 aa13.66□□□□□ -0.22
PNKP-204ENST00000594661 FBXO45P0C2W1 286 aa13.66□□□□□ -0.22
PNKP-204ENST00000594661 PTHLHP12272 177 aa13.66□□□□□ -0.22
PNKP-204ENST00000594661 PTGDSP41222 190 aa13.66□□□□□ -0.22
PNKP-204ENST00000594661 NHLH2Q02577 135 aa13.66□□□□□ -0.22
PNKP-204ENST00000594661 GAMTQ14353 236 aa13.66□□□□□ -0.22
PNKP-204ENST00000594661 KRBOX4Q5JUW0 171 aa13.66□□□□□ -0.22
PNKP-204ENST00000594661 BAP18Q8IXM2 172 aa13.66□□□□□ -0.22
PNKP-204ENST00000594661 PAQR4Q8N4S7 273 aaPredicted RBP13.66□□□□□ -0.22
PNKP-204ENST00000594661 EXD3Q8N9H8 876 aa13.66□□□□□ -0.22
PNKP-204ENST00000594661 IMMP1LQ96LU5 166 aa13.66□□□□□ -0.22
PNKP-204ENST00000594661 GFI1Q99684 422 aa13.66□□□□□ -0.22
PNKP-204ENST00000594661 OR11A1Q9GZK7 315 aa13.66□□□□□ -0.22
PNKP-204ENST00000594661 LPAR3Q9UBY5 353 aa13.66□□□□□ -0.22
PNKP-204ENST00000594661 KPTNQ9Y664 436 aa13.66□□□□□ -0.22
PNKP-204ENST00000594661 CPAMD8Q8IZJ3 1885 aa13.66□□□□□ -0.22
PNKP-204ENST00000594661 TXNDC12O95881 172 aa13.65□□□□□ -0.22
PNKP-204ENST00000594661 MBP02144 154 aa13.65□□□□□ -0.22
PNKP-204ENST00000594661 ITGB2P05107 769 aa13.65□□□□□ -0.22
PNKP-204ENST00000594661 ITGA5P08648 1049 aa13.65□□□□□ -0.22
PNKP-204ENST00000594661 CDK2P24941 298 aa13.65□□□□□ -0.22
PNKP-204ENST00000594661 SURF2Q15527 256 aaPredicted RBP13.65□□□□□ -0.22
PNKP-204ENST00000594661 TGIF1Q15583 401 aa13.65□□□□□ -0.22
PNKP-204ENST00000594661 MESTQ5EB52 335 aa13.65□□□□□ -0.22
PNKP-204ENST00000594661 EMC4Q5J8M3 183 aa13.65□□□□□ -0.22
PNKP-204ENST00000594661 UNQ6126/PRO20091Q6UXV3 157 aa13.65□□□□□ -0.22
PNKP-204ENST00000594661 PNLDC1Q8NA58 520 aaKnown RBP13.65□□□□□ -0.22
PNKP-204ENST00000594661 OR56B1Q8NGI3 324 aa13.65□□□□□ -0.22
PNKP-204ENST00000594661 OR51S1Q8NGJ8 323 aa13.65□□□□□ -0.22
PNKP-204ENST00000594661 OR10R2Q8NGX6 335 aa13.65□□□□□ -0.22
PNKP-204ENST00000594661 SYNPRQ8TBG9 265 aa13.65□□□□□ -0.22
PNKP-204ENST00000594661 SLC25A36Q96CQ1 311 aa13.65□□□□□ -0.22
PNKP-204ENST00000594661 PDCD1LG2Q9BQ51 273 aa13.65□□□□□ -0.22
PNKP-204ENST00000594661 CHST6Q9GZX3 395 aa13.65□□□□□ -0.22
PNKP-204ENST00000594661 MASP2O00187 686 aa13.64□□□□□ -0.23
PNKP-204ENST00000594661 DCTN6O00399 190 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms