RNA–Protein interactions for RNA: ENST00000593641.3

SSBP4-203, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-203ENST00000593641 OR9Q1Q8NGQ5 310 aa18.71■□□□□ 0.59
SSBP4-203ENST00000593641 ZNRF4Q8WWF5 429 aa18.71■□□□□ 0.59
SSBP4-203ENST00000593641 LRTOMTQ8WZ04 291 aa18.71■□□□□ 0.59
SSBP4-203ENST00000593641 UBE2FQ969M7 185 aa18.71■□□□□ 0.59
SSBP4-203ENST00000593641 DDOQ99489 341 aa18.71■□□□□ 0.59
SSBP4-203ENST00000593641 ELAC2Q9BQ52 826 aaKnown RBP18.71■□□□□ 0.59
SSBP4-203ENST00000593641 DPAGT1Q9H3H5 408 aa18.71■□□□□ 0.59
SSBP4-203ENST00000593641 CNTD2Q9H8S5 307 aa18.71■□□□□ 0.59
SSBP4-203ENST00000593641 ZNF446Q9NWS9 450 aa18.71■□□□□ 0.59
SSBP4-203ENST00000593641 KPTNQ9Y664 436 aa18.71■□□□□ 0.59
SSBP4-203ENST00000593641 A0A1B0GVI7 797 aa18.7■□□□□ 0.58
SSBP4-203ENST00000593641 TBX1O43435 398 aa18.7■□□□□ 0.58
SSBP4-203ENST00000593641 LHBP01229 141 aa18.7■□□□□ 0.58
SSBP4-203ENST00000593641 PSKH1P11801 424 aa18.7■□□□□ 0.58
SSBP4-203ENST00000593641 SLC15A1P46059 708 aa18.7■□□□□ 0.58
SSBP4-203ENST00000593641 POU4F2Q12837 409 aa18.7■□□□□ 0.58
SSBP4-203ENST00000593641 TIGD6Q17RP2 521 aa18.7■□□□□ 0.58
SSBP4-203ENST00000593641 PDZD9Q8IXQ8 264 aa18.7■□□□□ 0.58
SSBP4-203ENST00000593641 LINC00471Q8N535 108 aa18.7■□□□□ 0.58
SSBP4-203ENST00000593641 OR9Q2Q8NGE9 314 aa18.7■□□□□ 0.58
SSBP4-203ENST00000593641 LRRC29Q8WV35 223 aa18.7■□□□□ 0.58
SSBP4-203ENST00000593641 RNPEPL1Q9HAU8 725 aa18.7■□□□□ 0.58
SSBP4-203ENST00000593641 TBC1D23Q9NUY8 699 aa18.7■□□□□ 0.58
SSBP4-203ENST00000593641 IL20Q9NYY1 176 aa18.7■□□□□ 0.58
SSBP4-203ENST00000593641 CD300AQ9UGN4 299 aa18.7■□□□□ 0.58
SSBP4-203ENST00000593641 RPUSD1Q9UJJ7 312 aaKnown RBP18.7■□□□□ 0.58
SSBP4-203ENST00000593641 CAB39Q9Y376 341 aaPredicted RBP18.7■□□□□ 0.58
SSBP4-203ENST00000593641 FAM96BQ9Y3D0 163 aa18.7■□□□□ 0.58
SSBP4-203ENST00000593641 ZNF593O00488 134 aaPredicted RBP18.69■□□□□ 0.58
SSBP4-203ENST00000593641 ANXA2P07355 339 aaKnown RBP18.69■□□□□ 0.58
SSBP4-203ENST00000593641 MUC1P15941 1255 aaPredicted RBP18.69■□□□□ 0.58
SSBP4-203ENST00000593641 MSX2P35548 267 aaPredicted RBP18.69■□□□□ 0.58
SSBP4-203ENST00000593641 IER3P46695 156 aa18.69■□□□□ 0.58
SSBP4-203ENST00000593641 GRB2P62993 217 aaKnown RBP18.69■□□□□ 0.58
SSBP4-203ENST00000593641 PCK2Q16822 640 aa18.69■□□□□ 0.58
SSBP4-203ENST00000593641 GDPGP1Q6ZNW5 385 aa18.69■□□□□ 0.58
SSBP4-203ENST00000593641 SLC36A1Q7Z2H8 476 aa18.69■□□□□ 0.58
SSBP4-203ENST00000593641 DPY19L4Q7Z388 723 aa18.69■□□□□ 0.58
SSBP4-203ENST00000593641 VMO1Q7Z5L0 202 aa18.69■□□□□ 0.58
SSBP4-203ENST00000593641 PGAM4Q8N0Y7 254 aa18.69■□□□□ 0.58
SSBP4-203ENST00000593641 OR6K6Q8NGW6 343 aa18.69■□□□□ 0.58
SSBP4-203ENST00000593641 LINC01006Q8NI28 216 aa18.69■□□□□ 0.58
SSBP4-203ENST00000593641 SPSB4Q96A44 273 aa18.69■□□□□ 0.58
SSBP4-203ENST00000593641 BTBD10Q9BSF8 475 aa18.69■□□□□ 0.58
SSBP4-203ENST00000593641 MED4Q9NPJ6 270 aa18.69■□□□□ 0.58
SSBP4-203ENST00000593641 ONECUT1Q9UBC0 465 aa18.69■□□□□ 0.58
SSBP4-203ENST00000593641 BTBD17A6NE02 478 aa18.68■□□□□ 0.58
SSBP4-203ENST00000593641 TNFRSF11BO00300 401 aa18.68■□□□□ 0.58
SSBP4-203ENST00000593641 FCN3O75636 299 aa18.68■□□□□ 0.58
SSBP4-203ENST00000593641 TIPRLO75663 272 aa18.68■□□□□ 0.58
SSBP4-203ENST00000593641 HSD11B1P28845 292 aa18.68■□□□□ 0.58
SSBP4-203ENST00000593641 CX3CR1P49238 355 aa18.68■□□□□ 0.58
SSBP4-203ENST00000593641 RHOUQ7L0Q8 258 aa18.68■□□□□ 0.58
SSBP4-203ENST00000593641 SLC16A9Q7RTY1 509 aa18.68■□□□□ 0.58
SSBP4-203ENST00000593641 CMTM4Q8IZR5 234 aa18.68■□□□□ 0.58
SSBP4-203ENST00000593641 ZNF511Q8NB15 262 aa18.68■□□□□ 0.58
SSBP4-203ENST00000593641 OR8D4Q8NGM9 314 aa18.68■□□□□ 0.58
SSBP4-203ENST00000593641 RBM4BQ9BQ04 359 aaKnown RBP18.68■□□□□ 0.58
SSBP4-203ENST00000593641 SP140LQ9H930 580 aa18.68■□□□□ 0.58
SSBP4-203ENST00000593641 LYVE1Q9Y5Y7 322 aa18.68■□□□□ 0.58
SSBP4-203ENST00000593641 CLPXO76031 633 aa18.67■□□□□ 0.58
SSBP4-203ENST00000593641 GYPBP06028 91 aa18.67■□□□□ 0.58
SSBP4-203ENST00000593641 BLVRAP53004 296 aa18.67■□□□□ 0.58
SSBP4-203ENST00000593641 CRMP1Q14194 572 aa18.67■□□□□ 0.58
SSBP4-203ENST00000593641 TAF9Q16594 264 aa18.67■□□□□ 0.58
SSBP4-203ENST00000593641 WDR38Q5JTN6 314 aa18.67■□□□□ 0.58
SSBP4-203ENST00000593641 TEX30Q5JUR7 227 aa18.67■□□□□ 0.58
SSBP4-203ENST00000593641 RASSF6Q6ZTQ3 369 aa18.67■□□□□ 0.58
SSBP4-203ENST00000593641 PIP4P2Q8N4L2 257 aa18.67■□□□□ 0.58
SSBP4-203ENST00000593641 OR1M1Q8NGA1 313 aa18.67■□□□□ 0.58
SSBP4-203ENST00000593641 REEP6Q96HR9 211 aa18.67■□□□□ 0.58
SSBP4-203ENST00000593641 CCL13Q99616 98 aa18.67■□□□□ 0.58
SSBP4-203ENST00000593641 TSSK6Q9BXA6 273 aa18.67■□□□□ 0.58
SSBP4-203ENST00000593641 FAM107BQ9H098 131 aa18.67■□□□□ 0.58
SSBP4-203ENST00000593641 TOR3AQ9H497 397 aa18.67■□□□□ 0.58
SSBP4-203ENST00000593641 BAIAP2Q9UQB8 552 aa18.67■□□□□ 0.58
SSBP4-203ENST00000593641 A0A1B0GW55 424 aa18.66■□□□□ 0.58
SSBP4-203ENST00000593641 DHRS12A0PJE2 317 aa18.66■□□□□ 0.58
SSBP4-203ENST00000593641 CCNB2O95067 398 aa18.66■□□□□ 0.58
SSBP4-203ENST00000593641 APOC1P02654 83 aa18.66■□□□□ 0.58
SSBP4-203ENST00000593641 FBP1P09467 338 aa18.66■□□□□ 0.58
SSBP4-203ENST00000593641 DUX4L2P0CJ85 424 aa18.66■□□□□ 0.58
SSBP4-203ENST00000593641 DUX4L3P0CJ86 424 aa18.66■□□□□ 0.58
SSBP4-203ENST00000593641 DUX4L4P0CJ87 422 aa18.66■□□□□ 0.58
SSBP4-203ENST00000593641 DUX4L5P0CJ88 424 aa18.66■□□□□ 0.58
SSBP4-203ENST00000593641 DUX4L6P0CJ89 424 aa18.66■□□□□ 0.58
SSBP4-203ENST00000593641 DUX4L7P0CJ90 424 aa18.66■□□□□ 0.58
SSBP4-203ENST00000593641 SPI1P17947 270 aa18.66■□□□□ 0.58
SSBP4-203ENST00000593641 CFL1P23528 166 aaKnown RBP18.66■□□□□ 0.58
SSBP4-203ENST00000593641 GNALP38405 381 aa18.66■□□□□ 0.58
SSBP4-203ENST00000593641 NAA10P41227 235 aaPredicted RBP18.66■□□□□ 0.58
SSBP4-203ENST00000593641 HMGA2P52926 109 aa18.66■□□□□ 0.58
SSBP4-203ENST00000593641 SLC25A1P53007 311 aa18.66■□□□□ 0.58
SSBP4-203ENST00000593641 PROK1P58294 105 aa18.66■□□□□ 0.58
SSBP4-203ENST00000593641 KRTAP10-3P60369 221 aa18.66■□□□□ 0.58
SSBP4-203ENST00000593641 CSNK2BP67870 215 aa18.66■□□□□ 0.58
SSBP4-203ENST00000593641 FAM3AP98173 230 aa18.66■□□□□ 0.58
SSBP4-203ENST00000593641 DHRS7BQ6IAN0 325 aaPredicted RBP18.66■□□□□ 0.58
SSBP4-203ENST00000593641 ASPHD2Q6ICH7 369 aa18.66■□□□□ 0.58
SSBP4-203ENST00000593641 DUX4L9Q6RFH8 374 aaPredicted RBP18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms