RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 C10orf35Q96D05 121 aa11.66□□□□□ -0.54
VMP1-217ENST00000593168 LYZL4Q96KX0 146 aa11.66□□□□□ -0.54
VMP1-217ENST00000593168 CRNNQ9UBG3 495 aaPredicted RBP11.66□□□□□ -0.54
VMP1-217ENST00000593168 CKLFQ9UBR5 152 aa11.66□□□□□ -0.54
VMP1-217ENST00000593168 AK6Q9Y3D8 172 aaKnown RBP11.66□□□□□ -0.54
VMP1-217ENST00000593168 V9GYS6 101 aa11.66□□□□□ -0.54
VMP1-217ENST00000593168 C5orf49A4QMS7 147 aa11.65□□□□□ -0.54
VMP1-217ENST00000593168 MEGF11A6BM72 1044 aa11.65□□□□□ -0.54
VMP1-217ENST00000593168 ANKRD61A6NGH8 418 aa11.65□□□□□ -0.54
VMP1-217ENST00000593168 DHRS7CA6NNS2 312 aa11.65□□□□□ -0.54
VMP1-217ENST00000593168 XRCC2O43543 280 aa11.65□□□□□ -0.54
VMP1-217ENST00000593168 MTRF1O75570 445 aaKnown RBP11.65□□□□□ -0.54
VMP1-217ENST00000593168 DHRS3O75911 302 aa11.65□□□□□ -0.54
VMP1-217ENST00000593168 NCR1O76036 304 aa11.65□□□□□ -0.54
VMP1-217ENST00000593168 CD37P11049 281 aa11.65□□□□□ -0.54
VMP1-217ENST00000593168 DDOSTP39656 456 aa11.65□□□□□ -0.54
VMP1-217ENST00000593168 CAV3P56539 151 aa11.65□□□□□ -0.54
VMP1-217ENST00000593168 DYNC1I2Q13409 638 aaKnown RBP11.65□□□□□ -0.54
VMP1-217ENST00000593168 MOGQ16653 247 aa11.65□□□□□ -0.54
VMP1-217ENST00000593168 TBC1D28Q2M2D7 210 aa11.65□□□□□ -0.54
VMP1-217ENST00000593168 ASPHD2Q6ICH7 369 aa11.65□□□□□ -0.54
VMP1-217ENST00000593168 CDH24Q86UP0 819 aa11.65□□□□□ -0.54
VMP1-217ENST00000593168 NR2C2APQ86WQ0 139 aa11.65□□□□□ -0.54
VMP1-217ENST00000593168 COMMD2Q86X83 199 aa11.65□□□□□ -0.54
VMP1-217ENST00000593168 LIX1LQ8IVB5 337 aa11.65□□□□□ -0.54
VMP1-217ENST00000593168 SLC30A7Q8NEW0 376 aa11.65□□□□□ -0.54
VMP1-217ENST00000593168 STEAP2Q8NFT2 490 aa11.65□□□□□ -0.54
VMP1-217ENST00000593168 ACOT12Q8WYK0 555 aa11.65□□□□□ -0.54
VMP1-217ENST00000593168 SPSB4Q96A44 273 aa11.65□□□□□ -0.54
VMP1-217ENST00000593168 FGGYQ96C11 551 aa11.65□□□□□ -0.54
VMP1-217ENST00000593168 KCTD12Q96CX2 325 aaKnown RBP11.65□□□□□ -0.54
VMP1-217ENST00000593168 ORAI1Q96D31 301 aa11.65□□□□□ -0.54
VMP1-217ENST00000593168 POM121Q96HA1 1249 aa11.65□□□□□ -0.54
VMP1-217ENST00000593168 FAM71F1Q96KD3 344 aaPredicted RBP11.65□□□□□ -0.54
VMP1-217ENST00000593168 SOX7Q9BT81 388 aa11.65□□□□□ -0.54
VMP1-217ENST00000593168 OR10A4Q9H209 315 aa11.65□□□□□ -0.54
VMP1-217ENST00000593168 TBCCD1Q9NVR7 557 aa11.65□□□□□ -0.54
VMP1-217ENST00000593168 PEX16Q9Y5Y5 336 aa11.65□□□□□ -0.54
VMP1-217ENST00000593168 SLC25A15Q9Y619 301 aa11.65□□□□□ -0.54
VMP1-217ENST00000593168 V9GY05 133 aa11.65□□□□□ -0.54
VMP1-217ENST00000593168 TRAV8-7A0A075B6U6 113 aa11.64□□□□□ -0.55
VMP1-217ENST00000593168 SMIM30A4D0T7 59 aa11.64□□□□□ -0.55
VMP1-217ENST00000593168 EEF1E1-BLOC1S5C9J1V9 151 aa11.64□□□□□ -0.55
VMP1-217ENST00000593168 J3QW42 95 aa11.64□□□□□ -0.55
VMP1-217ENST00000593168 EEF1E1O43324 174 aaKnown RBP11.64□□□□□ -0.55
VMP1-217ENST00000593168 LMX1BO60663 402 aa11.64□□□□□ -0.55
VMP1-217ENST00000593168 ICMTO60725 284 aa11.64□□□□□ -0.55
VMP1-217ENST00000593168 IGLV1-44P01699 117 aa11.64□□□□□ -0.55
VMP1-217ENST00000593168 EPXP11678 715 aa11.64□□□□□ -0.55
VMP1-217ENST00000593168 ADRA2CP18825 462 aa11.64□□□□□ -0.55
VMP1-217ENST00000593168 CCNOP22674 350 aa11.64□□□□□ -0.55
VMP1-217ENST00000593168 BMXP51813 675 aa11.64□□□□□ -0.55
VMP1-217ENST00000593168 OR10A3P58181 314 aa11.64□□□□□ -0.55
VMP1-217ENST00000593168 C3orf36Q3SXR2 165 aa11.64□□□□□ -0.55
VMP1-217ENST00000593168 GLYATL3Q5SZD4 288 aa11.64□□□□□ -0.55
VMP1-217ENST00000593168 SFXN4Q6P4A7 337 aa11.64□□□□□ -0.55
VMP1-217ENST00000593168 NCCRP1Q6ZVX7 275 aaPredicted RBP11.64□□□□□ -0.55
VMP1-217ENST00000593168 RELL2Q8NC24 303 aaPredicted RBP11.64□□□□□ -0.55
VMP1-217ENST00000593168 OR5D14Q8NGL3 314 aa11.64□□□□□ -0.55
VMP1-217ENST00000593168 AKAP1Q92667 903 aaKnown RBP eCLIP11.64□□□□□ -0.55
VMP1-217ENST00000593168 ADAT3Q96EY9 351 aaPredicted RBP11.64□□□□□ -0.55
VMP1-217ENST00000593168 MS4A3Q96HJ5 214 aa11.64□□□□□ -0.55
VMP1-217ENST00000593168 REEP6Q96HR9 211 aa11.64□□□□□ -0.55
VMP1-217ENST00000593168 C6orf62Q9GZU0 229 aaPredicted RBP11.64□□□□□ -0.55
VMP1-217ENST00000593168 MTORP42345 2549 aa11.63□□□□□ -0.55
VMP1-217ENST00000593168 A0A1W2PR80 420 aa11.63□□□□□ -0.55
VMP1-217ENST00000593168 ALX3O95076 343 aa11.63□□□□□ -0.55
VMP1-217ENST00000593168 CLDN14O95500 239 aa11.63□□□□□ -0.55
VMP1-217ENST00000593168 MAS1P04201 325 aa11.63□□□□□ -0.55
VMP1-217ENST00000593168 CCL2P13500 99 aa11.63□□□□□ -0.55
VMP1-217ENST00000593168 ZNF20P17024 532 aa11.63□□□□□ -0.55
VMP1-217ENST00000593168 AGAP20933 346 aa11.63□□□□□ -0.55
VMP1-217ENST00000593168 S100A5P33763 92 aa11.63□□□□□ -0.55
VMP1-217ENST00000593168 THBS4P35443 961 aa11.63□□□□□ -0.55
VMP1-217ENST00000593168 IDH3GP51553 393 aaPredicted RBP11.63□□□□□ -0.55
VMP1-217ENST00000593168 FAM27E3Q08E93 113 aa11.63□□□□□ -0.55
VMP1-217ENST00000593168 GFOD2Q3B7J2 385 aa11.63□□□□□ -0.55
VMP1-217ENST00000593168 ZNF529Q6P280 563 aa11.63□□□□□ -0.55
VMP1-217ENST00000593168 MZT2AQ6P582 158 aa11.63□□□□□ -0.55
VMP1-217ENST00000593168 PGAP1Q75T13 922 aa11.63□□□□□ -0.55
VMP1-217ENST00000593168 SSX8Q7RTT4 187 aa11.63□□□□□ -0.55
VMP1-217ENST00000593168 OR5L1Q8NGL2 311 aa11.63□□□□□ -0.55
VMP1-217ENST00000593168 S100PBPQ96BU1 408 aa11.63□□□□□ -0.55
VMP1-217ENST00000593168 C14orf79Q96F83 325 aa11.63□□□□□ -0.55
VMP1-217ENST00000593168 GFI1Q99684 422 aa11.63□□□□□ -0.55
VMP1-217ENST00000593168 SLC30A2Q9BRI3 323 aa11.63□□□□□ -0.55
VMP1-217ENST00000593168 CXorf56Q9H5V9 222 aa11.63□□□□□ -0.55
VMP1-217ENST00000593168 OPA3Q9H6K4 179 aa11.63□□□□□ -0.55
VMP1-217ENST00000593168 SMURF1Q9HCE7 757 aa11.63□□□□□ -0.55
VMP1-217ENST00000593168 TAS2R4Q9NYW5 299 aa11.63□□□□□ -0.55
VMP1-217ENST00000593168 ABRACLQ9P1F3 81 aa11.63□□□□□ -0.55
VMP1-217ENST00000593168 ZNF469Q96JG9 3925 aaPredicted RBP11.63□□□□□ -0.55
VMP1-217ENST00000593168 hCG_38984A0A1B0GV85 526 aa11.62□□□□□ -0.55
VMP1-217ENST00000593168 ANXA2P2A6NMY6 339 aa11.62□□□□□ -0.55
VMP1-217ENST00000593168 IFITM5A6NNB3 132 aa11.62□□□□□ -0.55
VMP1-217ENST00000593168 C16orf97H3BN30 126 aa11.62□□□□□ -0.55
VMP1-217ENST00000593168 AIPO00170 330 aa11.62□□□□□ -0.55
VMP1-217ENST00000593168 CTDSP2O14595 271 aa11.62□□□□□ -0.55
VMP1-217ENST00000593168 CELA3BP08861 270 aa11.62□□□□□ -0.55
VMP1-217ENST00000593168 INHBBP09529 407 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms