RNA–Protein interactions for RNA: ENST00000592017.5

CLIP3-205, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

TSL 5

Gene CLIP3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-205ENST00000592017 ZNF205O95201 554 aa11.72□□□□□ -0.53
CLIP3-205ENST00000592017 IGHV2-5P01817 119 aa11.72□□□□□ -0.53
CLIP3-205ENST00000592017 MSMBP08118 114 aa11.72□□□□□ -0.53
CLIP3-205ENST00000592017 IRF2P14316 349 aa11.72□□□□□ -0.53
CLIP3-205ENST00000592017 HTR1FP30939 366 aa11.72□□□□□ -0.53
CLIP3-205ENST00000592017 CD200P41217 278 aa11.72□□□□□ -0.53
CLIP3-205ENST00000592017 GSK3AP49840 483 aa11.72□□□□□ -0.53
CLIP3-205ENST00000592017 RIDAP52758 137 aaKnown RBP11.72□□□□□ -0.53
CLIP3-205ENST00000592017 MAB21L1Q13394 359 aa11.72□□□□□ -0.53
CLIP3-205ENST00000592017 ZSCAN26Q16670 478 aa11.72□□□□□ -0.53
CLIP3-205ENST00000592017 ZNF829Q3KNS6 432 aaPredicted RBP11.72□□□□□ -0.53
CLIP3-205ENST00000592017 ZNF322Q6U7Q0 402 aaPredicted RBP11.72□□□□□ -0.53
CLIP3-205ENST00000592017 ZBTB49Q6ZSB9 765 aa11.72□□□□□ -0.53
CLIP3-205ENST00000592017 ZNF679Q8IYX0 411 aa11.72□□□□□ -0.53
CLIP3-205ENST00000592017 OR8S1Q8NH09 359 aa11.72□□□□□ -0.53
CLIP3-205ENST00000592017 OR51F2Q8NH61 342 aa11.72□□□□□ -0.53
CLIP3-205ENST00000592017 UBE2FQ969M7 185 aa11.72□□□□□ -0.53
CLIP3-205ENST00000592017 TMEM186Q96B77 213 aa11.72□□□□□ -0.53
CLIP3-205ENST00000592017 SIGLEC11Q96RL6 698 aa11.72□□□□□ -0.53
CLIP3-205ENST00000592017 SLC29A1Q99808 456 aa11.72□□□□□ -0.53
CLIP3-205ENST00000592017 PAPOLGQ9BWT3 736 aaKnown RBP11.72□□□□□ -0.53
CLIP3-205ENST00000592017 RGCCQ9H4X1 137 aa11.72□□□□□ -0.53
CLIP3-205ENST00000592017 CLN6Q9NWW5 311 aa11.72□□□□□ -0.53
CLIP3-205ENST00000592017 FAM206AQ9NX38 181 aa11.72□□□□□ -0.53
CLIP3-205ENST00000592017 PCDHB10Q9UN67 800 aa11.72□□□□□ -0.53
CLIP3-205ENST00000592017 GMPPBQ9Y5P6 360 aa11.72□□□□□ -0.53
CLIP3-205ENST00000592017 A0A1B0GWJ7 208 aa11.71□□□□□ -0.53
CLIP3-205ENST00000592017 A6NLC8 198 aa11.71□□□□□ -0.53
CLIP3-205ENST00000592017 LRRC30A6NM36 301 aa11.71□□□□□ -0.53
CLIP3-205ENST00000592017 IFNL4K9M1U5 179 aa11.71□□□□□ -0.53
CLIP3-205ENST00000592017 GMDSO60547 372 aa11.71□□□□□ -0.53
CLIP3-205ENST00000592017 ZNF254O75437 659 aa11.71□□□□□ -0.53
CLIP3-205ENST00000592017 SRP14P37108 136 aaKnown RBP11.71□□□□□ -0.53
CLIP3-205ENST00000592017 GNALP38405 381 aa11.71□□□□□ -0.53
CLIP3-205ENST00000592017 DDOSTP39656 456 aa11.71□□□□□ -0.53
CLIP3-205ENST00000592017 ROM1Q03395 351 aa11.71□□□□□ -0.53
CLIP3-205ENST00000592017 MFGE8Q08431 387 aaPredicted RBP11.71□□□□□ -0.53
CLIP3-205ENST00000592017 POU4F2Q12837 409 aa11.71□□□□□ -0.53
CLIP3-205ENST00000592017 ZMYND11Q15326 602 aa11.71□□□□□ -0.53
CLIP3-205ENST00000592017 DEGS2Q6QHC5 323 aa11.71□□□□□ -0.53
CLIP3-205ENST00000592017 PLEKHG7Q6ZR37 379 aa11.71□□□□□ -0.53
CLIP3-205ENST00000592017 SPICQ8N5J4 248 aa11.71□□□□□ -0.53
CLIP3-205ENST00000592017 OR10H4Q8NGA5 316 aa11.71□□□□□ -0.53
CLIP3-205ENST00000592017 OR11L1Q8NGX0 322 aa11.71□□□□□ -0.53
CLIP3-205ENST00000592017 RFKQ969G6 155 aa11.71□□□□□ -0.53
CLIP3-205ENST00000592017 HRASLS5Q96KN8 279 aa11.71□□□□□ -0.53
CLIP3-205ENST00000592017 LYZL4Q96KX0 146 aa11.71□□□□□ -0.53
CLIP3-205ENST00000592017 MNTQ99583 582 aa11.71□□□□□ -0.53
CLIP3-205ENST00000592017 APOL4Q9BPW4 351 aa11.71□□□□□ -0.53
CLIP3-205ENST00000592017 HAO2Q9NYQ3 351 aa11.71□□□□□ -0.53
CLIP3-205ENST00000592017 FAM20BO75063 409 aa11.7□□□□□ -0.54
CLIP3-205ENST00000592017 ENTPD6O75354 484 aa11.7□□□□□ -0.54
CLIP3-205ENST00000592017 GRPP07492 148 aa11.7□□□□□ -0.54
CLIP3-205ENST00000592017 PMELP40967 661 aa11.7□□□□□ -0.54
CLIP3-205ENST00000592017 RCN1Q15293 331 aa11.7□□□□□ -0.54
CLIP3-205ENST00000592017 MPPED2Q15777 294 aa11.7□□□□□ -0.54
CLIP3-205ENST00000592017 FAM201AQ5SY85 155 aa11.7□□□□□ -0.54
CLIP3-205ENST00000592017 SSX6Q7RTT6 188 aa11.7□□□□□ -0.54
CLIP3-205ENST00000592017 C1orf87Q8N0U7 546 aa11.7□□□□□ -0.54
CLIP3-205ENST00000592017 KLHL36Q8N4N3 616 aa11.7□□□□□ -0.54
CLIP3-205ENST00000592017 CELF2-AS1Q8N7Q2 184 aa11.7□□□□□ -0.54
CLIP3-205ENST00000592017 BOLLQ8N9W6 283 aaKnown RBP11.7□□□□□ -0.54
CLIP3-205ENST00000592017 CSNK2A3Q8NEV1 391 aa11.7□□□□□ -0.54
CLIP3-205ENST00000592017 FAM71F1Q96KD3 344 aaPredicted RBP11.7□□□□□ -0.54
CLIP3-205ENST00000592017 PBOV1Q9GZY1 135 aa11.7□□□□□ -0.54
CLIP3-205ENST00000592017 PPP1R3EQ9H7J1 279 aa11.7□□□□□ -0.54
CLIP3-205ENST00000592017 FN3KRPQ9HA64 309 aa11.7□□□□□ -0.54
CLIP3-205ENST00000592017 AASSQ9UDR5 926 aa11.7□□□□□ -0.54
CLIP3-205ENST00000592017 RHBDD3Q9Y3P4 386 aa11.7□□□□□ -0.54
CLIP3-205ENST00000592017 ANK2Q01484 3957 aa11.69□□□□□ -0.54
CLIP3-205ENST00000592017 TRAV20A0A0B4J274 112 aa11.69□□□□□ -0.54
CLIP3-205ENST00000592017 A0A1W2PQL4 384 aaPredicted RBP11.69□□□□□ -0.54
CLIP3-205ENST00000592017 hCG_1807616A0A1W2PRN6 198 aa11.69□□□□□ -0.54
CLIP3-205ENST00000592017 LOC110117498-PIK3R3F6TDL0 507 aa11.69□□□□□ -0.54
CLIP3-205ENST00000592017 PLPP2O43688 288 aa11.69□□□□□ -0.54
CLIP3-205ENST00000592017 RPP14O95059 124 aaKnown RBP11.69□□□□□ -0.54
CLIP3-205ENST00000592017 AVPP01185 164 aa11.69□□□□□ -0.54
CLIP3-205ENST00000592017 KRT8P05787 483 aa11.69□□□□□ -0.54
CLIP3-205ENST00000592017 ANPEPP15144 967 aa11.69□□□□□ -0.54
CLIP3-205ENST00000592017 PCMT1P22061 227 aa11.69□□□□□ -0.54
CLIP3-205ENST00000592017 ACKR3P25106 362 aa11.69□□□□□ -0.54
CLIP3-205ENST00000592017 MDH2P40926 338 aaKnown RBP11.69□□□□□ -0.54
CLIP3-205ENST00000592017 GATA4P43694 442 aa11.69□□□□□ -0.54
CLIP3-205ENST00000592017 LCN2P80188 198 aa11.69□□□□□ -0.54
CLIP3-205ENST00000592017 HOXA4Q00056 320 aaPredicted RBP11.69□□□□□ -0.54
CLIP3-205ENST00000592017 EGR3Q06889 387 aa11.69□□□□□ -0.54
CLIP3-205ENST00000592017 MZT1Q08AG7 82 aa11.69□□□□□ -0.54
CLIP3-205ENST00000592017 OR8B8Q15620 311 aa11.69□□□□□ -0.54
CLIP3-205ENST00000592017 LRRC36Q1X8D7 754 aa11.69□□□□□ -0.54
CLIP3-205ENST00000592017 TMEM155Q4W5P6 130 aa11.69□□□□□ -0.54
CLIP3-205ENST00000592017 BCL2L15Q5TBC7 163 aa11.69□□□□□ -0.54
CLIP3-205ENST00000592017 FAHD2BQ6P2I3 314 aaPredicted RBP11.69□□□□□ -0.54
CLIP3-205ENST00000592017 C1orf229Q6ZS94 237 aaPredicted RBP11.69□□□□□ -0.54
CLIP3-205ENST00000592017 KLBQ86Z14 1044 aa11.69□□□□□ -0.54
CLIP3-205ENST00000592017 MUC20Q8N307 709 aaPredicted RBP11.69□□□□□ -0.54
CLIP3-205ENST00000592017 GALNT4Q8N4A0 578 aa11.69□□□□□ -0.54
CLIP3-205ENST00000592017 FTMTQ8N4E7 242 aa11.69□□□□□ -0.54
CLIP3-205ENST00000592017 YIPF7Q8N8F6 280 aa11.69□□□□□ -0.54
CLIP3-205ENST00000592017 SPERTQ8NA61 448 aa11.69□□□□□ -0.54
CLIP3-205ENST00000592017 C19orf18Q8NEA5 215 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms