RNA–Protein interactions for RNA: ENST00000588857.5

ATG4D-209, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-209ENST00000588857 DDOSTP39656 456 aa19.23■□□□□ 0.67
ATG4D-209ENST00000588857 GSK3AP49840 483 aa19.23■□□□□ 0.67
ATG4D-209ENST00000588857 ZNF83P51522 516 aa19.23■□□□□ 0.67
ATG4D-209ENST00000588857 RIPPLY1Q0D2K3 151 aa19.23■□□□□ 0.67
ATG4D-209ENST00000588857 MRPL21Q7Z2W9 205 aaKnown RBP19.23■□□□□ 0.67
ATG4D-209ENST00000588857 OR51B6Q9H340 312 aa19.23■□□□□ 0.67
ATG4D-209ENST00000588857 ZCCHC4Q9H5U6 513 aa19.23■□□□□ 0.67
ATG4D-209ENST00000588857 PTTG3PQ9NZH4 202 aa19.23■□□□□ 0.67
ATG4D-209ENST00000588857 DAPK2Q9UIK4 370 aa19.23■□□□□ 0.67
ATG4D-209ENST00000588857 IGHV1-18A0A0C4DH31 117 aa19.23■□□□□ 0.67
ATG4D-209ENST00000588857 hCG_38984A0A1B0GV85 526 aa19.23■□□□□ 0.67
ATG4D-209ENST00000588857 ICMTO60725 284 aa19.23■□□□□ 0.67
ATG4D-209ENST00000588857 EPXP11678 715 aa19.23■□□□□ 0.67
ATG4D-209ENST00000588857 FAHP16930 419 aa19.23■□□□□ 0.67
ATG4D-209ENST00000588857 ADRA2CP18825 462 aa19.23■□□□□ 0.67
ATG4D-209ENST00000588857 RAB3AP20336 220 aa19.23■□□□□ 0.67
ATG4D-209ENST00000588857 CCKARP32238 428 aa19.23■□□□□ 0.67
ATG4D-209ENST00000588857 S100A5P33763 92 aa19.23■□□□□ 0.67
ATG4D-209ENST00000588857 THBS4P35443 961 aa19.23■□□□□ 0.67
ATG4D-209ENST00000588857 FAM3AP98173 230 aa19.23■□□□□ 0.67
ATG4D-209ENST00000588857 C3orf36Q3SXR2 165 aa19.23■□□□□ 0.67
ATG4D-209ENST00000588857 UNQ6126/PRO20091Q6UXV3 157 aa19.23■□□□□ 0.67
ATG4D-209ENST00000588857 SSX8Q7RTT4 187 aa19.23■□□□□ 0.67
ATG4D-209ENST00000588857 OR1M1Q8NGA1 313 aa19.23■□□□□ 0.67
ATG4D-209ENST00000588857 OR6Q1Q8NGQ2 317 aa19.23■□□□□ 0.67
ATG4D-209ENST00000588857 LILRB4Q8NHJ6 448 aa19.23■□□□□ 0.67
ATG4D-209ENST00000588857 GFI1Q99684 422 aa19.23■□□□□ 0.67
ATG4D-209ENST00000588857 SLC30A2Q9BRI3 323 aa19.23■□□□□ 0.67
ATG4D-209ENST00000588857 OPA3Q9H6K4 179 aa19.23■□□□□ 0.67
ATG4D-209ENST00000588857 SMURF1Q9HCE7 757 aa19.23■□□□□ 0.67
ATG4D-209ENST00000588857 PEX16Q9Y5Y5 336 aa19.23■□□□□ 0.67
ATG4D-209ENST00000588857 FAM90A27PA6NNH2 459 aa19.22■□□□□ 0.67
ATG4D-209ENST00000588857 M0R1B8 84 aa19.22■□□□□ 0.67
ATG4D-209ENST00000588857 SPOCK1Q08629 439 aa19.22■□□□□ 0.67
ATG4D-209ENST00000588857 GK2Q14410 553 aaPredicted RBP19.22■□□□□ 0.67
ATG4D-209ENST00000588857 MZT2AQ6P582 158 aa19.22■□□□□ 0.67
ATG4D-209ENST00000588857 LINC00299Q6ZSB3 139 aa19.22■□□□□ 0.67
ATG4D-209ENST00000588857 RFPL4BQ6ZWI9 263 aa19.22■□□□□ 0.67
ATG4D-209ENST00000588857 DNAAF1Q8NEP3 725 aa19.22■□□□□ 0.67
ATG4D-209ENST00000588857 OR13C9Q8NGT0 318 aa19.22■□□□□ 0.67
ATG4D-209ENST00000588857 ACOT12Q8WYK0 555 aa19.22■□□□□ 0.67
ATG4D-209ENST00000588857 PP6455Q8WZ26 134 aa19.22■□□□□ 0.67
ATG4D-209ENST00000588857 KCTD12Q96CX2 325 aaKnown RBP19.22■□□□□ 0.67
ATG4D-209ENST00000588857 LRRC46Q96FV0 321 aa19.22■□□□□ 0.67
ATG4D-209ENST00000588857 REPIN1Q9BWE0 567 aaKnown RBP19.22■□□□□ 0.67
ATG4D-209ENST00000588857 FLNBO75369 2602 aaKnown RBP19.21■□□□□ 0.67
ATG4D-209ENST00000588857 IFITM5A6NNB3 132 aa19.21■□□□□ 0.67
ATG4D-209ENST00000588857 RGS5O15539 181 aa19.21■□□□□ 0.67
ATG4D-209ENST00000588857 SMPD2O60906 423 aa19.21■□□□□ 0.67
ATG4D-209ENST00000588857 ERCC1P07992 297 aaPredicted RBP19.21■□□□□ 0.67
ATG4D-209ENST00000588857 FAM157BP0CG42 384 aa19.21■□□□□ 0.67
ATG4D-209ENST00000588857 ZNF35P13682 527 aa19.21■□□□□ 0.67
ATG4D-209ENST00000588857 UCP2P55851 309 aa19.21■□□□□ 0.67
ATG4D-209ENST00000588857 GLT8D1Q68CQ7 371 aa19.21■□□□□ 0.67
ATG4D-209ENST00000588857 NKAIN3Q8N8D7 197 aa19.21■□□□□ 0.67
ATG4D-209ENST00000588857 OR51A2Q8NGJ7 313 aa19.21■□□□□ 0.67
ATG4D-209ENST00000588857 CA5BP1Q8WTZ4 195 aa19.21■□□□□ 0.67
ATG4D-209ENST00000588857 TMEM138Q9NPI0 162 aa19.21■□□□□ 0.67
ATG4D-209ENST00000588857 HIVEP3Q5T1R4 2406 aa19.21■□□□□ 0.67
ATG4D-209ENST00000588857 AIPO00170 330 aa19.2■□□□□ 0.66
ATG4D-209ENST00000588857 SULT1B1O43704 296 aa19.2■□□□□ 0.66
ATG4D-209ENST00000588857 OCMP0CE72 109 aaPredicted RBP19.2■□□□□ 0.66
ATG4D-209ENST00000588857 SLC2A2P11168 524 aaPredicted RBP19.2■□□□□ 0.66
ATG4D-209ENST00000588857 PPP3CBP16298 524 aa19.2■□□□□ 0.66
ATG4D-209ENST00000588857 ACKR3P25106 362 aa19.2■□□□□ 0.66
ATG4D-209ENST00000588857 BDKRB2P30411 391 aa19.2■□□□□ 0.66
ATG4D-209ENST00000588857 HLXQ14774 488 aaPredicted RBP19.2■□□□□ 0.66
ATG4D-209ENST00000588857 OR8B8Q15620 311 aa19.2■□□□□ 0.66
ATG4D-209ENST00000588857 FBXL19-AS1Q494R0 122 aa19.2■□□□□ 0.66
ATG4D-209ENST00000588857 C4orf17Q53FE4 359 aa19.2■□□□□ 0.66
ATG4D-209ENST00000588857 ITFG2Q969R8 447 aa19.2■□□□□ 0.66
ATG4D-209ENST00000588857 PLGRKTQ9HBL7 147 aa19.2■□□□□ 0.66
ATG4D-209ENST00000588857 IGHV2OR16-5A0A0B4J2B6 119 aa19.19■□□□□ 0.66
ATG4D-209ENST00000588857 GGT3PA6NGU5 568 aa19.19■□□□□ 0.66
ATG4D-209ENST00000588857 CTDSP2O14595 271 aa19.19■□□□□ 0.66
ATG4D-209ENST00000588857 TMEM127O75204 238 aa19.19■□□□□ 0.66
ATG4D-209ENST00000588857 ATF1P18846 271 aa19.19■□□□□ 0.66
ATG4D-209ENST00000588857 RAD52P43351 418 aa19.19■□□□□ 0.66
ATG4D-209ENST00000588857 PRSS12P56730 875 aa19.19■□□□□ 0.66
ATG4D-209ENST00000588857 PPP1CBP62140 327 aa19.19■□□□□ 0.66
ATG4D-209ENST00000588857 HES5Q5TA89 166 aa19.19■□□□□ 0.66
ATG4D-209ENST00000588857 ZNF529Q6P280 563 aa19.19■□□□□ 0.66
ATG4D-209ENST00000588857 CHST5Q9GZS9 411 aa19.19■□□□□ 0.66
ATG4D-209ENST00000588857 POFUT1Q9H488 388 aa19.19■□□□□ 0.66
ATG4D-209ENST00000588857 COMMD3Q9UBI1 195 aa19.19■□□□□ 0.66
ATG4D-209ENST00000588857 MAGEB3O15480 346 aa19.19■□□□□ 0.66
ATG4D-209ENST00000588857 NAAAQ02083 359 aa19.19■□□□□ 0.66
ATG4D-209ENST00000588857 TNK1Q13470 666 aa19.19■□□□□ 0.66
ATG4D-209ENST00000588857 MOGQ16653 247 aa19.19■□□□□ 0.66
ATG4D-209ENST00000588857 DDI2Q5TDH0 399 aa19.19■□□□□ 0.66
ATG4D-209ENST00000588857 UTS2BQ765I0 119 aa19.19■□□□□ 0.66
ATG4D-209ENST00000588857 OR1J1Q8NGS3 322 aa19.19■□□□□ 0.66
ATG4D-209ENST00000588857 RNASE6Q93091 150 aaKnown RBP19.19■□□□□ 0.66
ATG4D-209ENST00000588857 NPAP1Q9NZP6 1156 aa19.19■□□□□ 0.66
ATG4D-209ENST00000588857 CMAHPQ9Y471 501 aa19.19■□□□□ 0.66
ATG4D-209ENST00000588857 LRRK2Q5S007 2527 aa19.18■□□□□ 0.66
ATG4D-209ENST00000588857 NKX2-6A6NCS4 301 aa19.18■□□□□ 0.66
ATG4D-209ENST00000588857 CRYAAP02489 173 aa19.18■□□□□ 0.66
ATG4D-209ENST00000588857 THBS2P35442 1172 aa19.18■□□□□ 0.66
ATG4D-209ENST00000588857 SPATA46Q5T0L3 261 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms