RNA–Protein interactions for RNA: ENST00000588516.5

NEDD4L-223, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene NEDD4L, Length 1,304 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-223ENST00000588516 SLC6A7Q99884 636 aa12.45□□□□□ -0.42
NEDD4L-223ENST00000588516 NUDT22Q9BRQ3 303 aa12.45□□□□□ -0.42
NEDD4L-223ENST00000588516 CRB3Q9BUF7 120 aa12.45□□□□□ -0.42
NEDD4L-223ENST00000588516 CDCP1Q9H5V8 836 aa12.45□□□□□ -0.42
NEDD4L-223ENST00000588516 SEC61A2Q9H9S3 476 aa12.45□□□□□ -0.42
NEDD4L-223ENST00000588516 MED29Q9NX70 200 aa12.45□□□□□ -0.42
NEDD4L-223ENST00000588516 TNRC6BQ9UPQ9 1833 aaKnown RBP12.44□□□□□ -0.42
NEDD4L-223ENST00000588516 OR14I1A6ND48 311 aa12.44□□□□□ -0.42
NEDD4L-223ENST00000588516 TEX46H3BTG2 121 aa12.44□□□□□ -0.42
NEDD4L-223ENST00000588516 CA11O75493 328 aa12.44□□□□□ -0.42
NEDD4L-223ENST00000588516 FGF2P09038 288 aa12.44□□□□□ -0.42
NEDD4L-223ENST00000588516 PRKXP51817 358 aa12.44□□□□□ -0.42
NEDD4L-223ENST00000588516 IL13RA1P78552 427 aa12.44□□□□□ -0.42
NEDD4L-223ENST00000588516 VAX1Q5SQQ9 334 aa12.44□□□□□ -0.42
NEDD4L-223ENST00000588516 ARSKQ6UWY0 536 aa12.44□□□□□ -0.42
NEDD4L-223ENST00000588516 ANGPTL5Q86XS5 388 aa12.44□□□□□ -0.42
NEDD4L-223ENST00000588516 KDM8Q8N371 416 aa12.44□□□□□ -0.42
NEDD4L-223ENST00000588516 STPG2Q8N412 459 aa12.44□□□□□ -0.42
NEDD4L-223ENST00000588516 GALNT11Q8NCW6 608 aa12.44□□□□□ -0.42
NEDD4L-223ENST00000588516 PXT1Q8NFP0 134 aa12.44□□□□□ -0.42
NEDD4L-223ENST00000588516 OR2M3Q8NG83 312 aa12.44□□□□□ -0.42
NEDD4L-223ENST00000588516 DNAJA3Q96EY1 480 aa12.44□□□□□ -0.42
NEDD4L-223ENST00000588516 WDR89Q96FK6 387 aaPredicted RBP12.44□□□□□ -0.42
NEDD4L-223ENST00000588516 REG4Q9BYZ8 158 aa12.44□□□□□ -0.42
NEDD4L-223ENST00000588516 CHST6Q9GZX3 395 aa12.44□□□□□ -0.42
NEDD4L-223ENST00000588516 ANAPC10Q9UM13 185 aa12.44□□□□□ -0.42
NEDD4L-223ENST00000588516 TNFSF18Q9UNG2 199 aa12.44□□□□□ -0.42
NEDD4L-223ENST00000588516 MRPS28Q9Y2Q9 187 aaKnown RBP12.44□□□□□ -0.42
NEDD4L-223ENST00000588516 B3GALT1Q9Y5Z6 326 aa12.44□□□□□ -0.42
NEDD4L-223ENST00000588516 RP1P56715 2156 aa12.44□□□□□ -0.42
NEDD4L-223ENST00000588516 FREM3P0C091 2139 aa12.44□□□□□ -0.42
NEDD4L-223ENST00000588516 MYO18BQ8IUG5 2567 aa12.44□□□□□ -0.42
NEDD4L-223ENST00000588516 IGHV3-20A0A0C4DH32 117 aa12.43□□□□□ -0.42
NEDD4L-223ENST00000588516 C9orf170A2RU37 121 aa12.43□□□□□ -0.42
NEDD4L-223ENST00000588516 AQP7P3A6NL99 342 aa12.43□□□□□ -0.42
NEDD4L-223ENST00000588516 GJE1A6NN92 205 aa12.43□□□□□ -0.42
NEDD4L-223ENST00000588516 H3BML4 177 aa12.43□□□□□ -0.42
NEDD4L-223ENST00000588516 WDPCPO95876 746 aa12.43□□□□□ -0.42
NEDD4L-223ENST00000588516 CD63P08962 238 aa12.43□□□□□ -0.42
NEDD4L-223ENST00000588516 VSIG8P0DPA2 414 aa12.43□□□□□ -0.42
NEDD4L-223ENST00000588516 ZNF250P15622 560 aa12.43□□□□□ -0.42
NEDD4L-223ENST00000588516 ZNF28P17035 718 aa12.43□□□□□ -0.42
NEDD4L-223ENST00000588516 ENPP1P22413 925 aa12.43□□□□□ -0.42
NEDD4L-223ENST00000588516 THBS4P35443 961 aa12.43□□□□□ -0.42
NEDD4L-223ENST00000588516 CASRP41180 1078 aa12.43□□□□□ -0.42
NEDD4L-223ENST00000588516 TAS2R46P59540 309 aa12.43□□□□□ -0.42
NEDD4L-223ENST00000588516 EIF5AP63241 154 aaKnown RBP12.43□□□□□ -0.42
NEDD4L-223ENST00000588516 ECH1Q13011 328 aa12.43□□□□□ -0.42
NEDD4L-223ENST00000588516 IL11RAQ14626 422 aa12.43□□□□□ -0.42
NEDD4L-223ENST00000588516 EXT1Q16394 746 aa12.43□□□□□ -0.42
NEDD4L-223ENST00000588516 FAM69BQ5VUD6 431 aa12.43□□□□□ -0.42
NEDD4L-223ENST00000588516 DCAF12L2Q5VW00 463 aa12.43□□□□□ -0.42
NEDD4L-223ENST00000588516 ZNF660Q6AZW8 331 aaPredicted RBP12.43□□□□□ -0.42
NEDD4L-223ENST00000588516 UQCC3Q6UW78 93 aa12.43□□□□□ -0.42
NEDD4L-223ENST00000588516 SHISA6Q6ZSJ9 500 aa12.43□□□□□ -0.42
NEDD4L-223ENST00000588516 GLRX5Q86SX6 157 aa12.43□□□□□ -0.42
NEDD4L-223ENST00000588516 COMMD2Q86X83 199 aa12.43□□□□□ -0.42
NEDD4L-223ENST00000588516 FADS6Q8N9I5 356 aa12.43□□□□□ -0.42
NEDD4L-223ENST00000588516 GJC3Q8NFK1 279 aa12.43□□□□□ -0.42
NEDD4L-223ENST00000588516 OR52N4Q8NGI2 321 aa12.43□□□□□ -0.42
NEDD4L-223ENST00000588516 OR13C8Q8NGS7 320 aa12.43□□□□□ -0.42
NEDD4L-223ENST00000588516 OR4K15Q8NH41 348 aa12.43□□□□□ -0.42
NEDD4L-223ENST00000588516 PP6455Q8WZ26 134 aa12.43□□□□□ -0.42
NEDD4L-223ENST00000588516 ST8SIA2Q92186 375 aa12.43□□□□□ -0.42
NEDD4L-223ENST00000588516 NKD1Q969G9 470 aa12.43□□□□□ -0.42
NEDD4L-223ENST00000588516 PMEPA1Q969W9 287 aa12.43□□□□□ -0.42
NEDD4L-223ENST00000588516 RAB3CQ96E17 227 aa12.43□□□□□ -0.42
NEDD4L-223ENST00000588516 OCSTAMPQ9BR26 566 aa12.43□□□□□ -0.42
NEDD4L-223ENST00000588516 NMES1Q9C002 83 aa12.43□□□□□ -0.42
NEDD4L-223ENST00000588516 PRORYQ9H606 182 aa12.43□□□□□ -0.42
NEDD4L-223ENST00000588516 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.43□□□□□ -0.423e-7■■■■■ 51.9
NEDD4L-223ENST00000588516 RHBDD3Q9Y3P4 386 aa12.43□□□□□ -0.42
NEDD4L-223ENST00000588516 HECTD1Q9ULT8 2610 aa12.43□□□□□ -0.42
NEDD4L-223ENST00000588516 SPTA1P02549 2419 aa12.43□□□□□ -0.42
NEDD4L-223ENST00000588516 PTPRBP23467 1997 aa12.42□□□□□ -0.42
NEDD4L-223ENST00000588516 SULT2B1O00204 365 aa12.42□□□□□ -0.42
NEDD4L-223ENST00000588516 DNPH1O43598 174 aa12.42□□□□□ -0.42
NEDD4L-223ENST00000588516 MTRF1O75570 445 aaKnown RBP12.42□□□□□ -0.42
NEDD4L-223ENST00000588516 GP1BAP07359 652 aa12.42□□□□□ -0.42
NEDD4L-223ENST00000588516 HCKP08631 526 aa12.42□□□□□ -0.42
NEDD4L-223ENST00000588516 PET100P0DJ07 73 aa12.42□□□□□ -0.42
NEDD4L-223ENST00000588516 IL11P20809 199 aa12.42□□□□□ -0.42
NEDD4L-223ENST00000588516 EPHA8P29322 1005 aaPredicted RBP12.42□□□□□ -0.42
NEDD4L-223ENST00000588516 ALDH3B1P43353 468 aa12.42□□□□□ -0.42
NEDD4L-223ENST00000588516 CSNK2A1P68400 391 aaPredicted RBP12.42□□□□□ -0.42
NEDD4L-223ENST00000588516 SURF2Q15527 256 aaPredicted RBP12.42□□□□□ -0.42
NEDD4L-223ENST00000588516 HIST3H3Q16695 136 aa12.42□□□□□ -0.42
NEDD4L-223ENST00000588516 C2orf68Q2NKX9 166 aa12.42□□□□□ -0.42
NEDD4L-223ENST00000588516 CCDC157Q569K6 752 aa12.42□□□□□ -0.42
NEDD4L-223ENST00000588516 LY6G6FQ5SQ64 297 aa12.42□□□□□ -0.42
NEDD4L-223ENST00000588516 CORO6Q6QEF8 472 aa12.42□□□□□ -0.42
NEDD4L-223ENST00000588516 ALKAL2Q6UX46 152 aa12.42□□□□□ -0.42
NEDD4L-223ENST00000588516 PAQR4Q8N4S7 273 aaPredicted RBP12.42□□□□□ -0.42
NEDD4L-223ENST00000588516 ZNF283Q8N7M2 679 aa12.42□□□□□ -0.42
NEDD4L-223ENST00000588516 BVESQ8NE79 360 aa12.42□□□□□ -0.42
NEDD4L-223ENST00000588516 TMEM185AQ8NFB2 350 aa12.42□□□□□ -0.42
NEDD4L-223ENST00000588516 OR13C9Q8NGT0 318 aa12.42□□□□□ -0.42
NEDD4L-223ENST00000588516 TERB2Q8NHR7 220 aa12.42□□□□□ -0.42
NEDD4L-223ENST00000588516 POC1BQ8TC44 478 aa12.42□□□□□ -0.42
NEDD4L-223ENST00000588516 OR51E1Q8TCB6 317 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms